| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Dechlorosoma suillum PS | 1.0 | Dsui_0707 | | protein RecA | 1.0 | Dsui_1810 | | DNA-binding protein, YbaB/EbfC family | 0.83 | 6 |
| Rhodanobacter denitrificans MT42 | 0.81 | LRK55_RS14695 | | recombinase RecA | 0.61 | LRK55_RS01025 | | YbaB/EbfC family nucleoid-associated protein | — | — |
| Rhodanobacter sp. FW510-T8 | 0.81 | OKGIIK_03740 | recA | recombinase RecA | 0.59 | OKGIIK_05650 | ybaB | YbaB/EbfC family nucleoid-associated protein | 0.51 | 39 |
| Rhodanobacter denitrificans FW104-10B01 | 0.81 | LRK54_RS14980 | | recombinase RecA | 0.60 | LRK54_RS01255 | | YbaB/EbfC family nucleoid-associated protein | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.81 | QEN71_RS02335 | | recombinase RecA | 0.76 | QEN71_RS22290 | | YbaB/EbfC family nucleoid-associated protein | — | — |
| Burkholderia phytofirmans PsJN | 0.79 | BPHYT_RS16360 | | recombinase RecA | 0.75 | BPHYT_RS09060 | | hypothetical protein | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.79 | H281DRAFT_04208 | | RecA protein | 0.75 | H281DRAFT_00833 | | hypothetical protein | — | — |
| Paraburkholderia graminis OAS925 | 0.79 | ABIE53_003448 | | recombination protein RecA | 0.76 | ABIE53_002047 | | DNA-binding YbaB/EbfC family protein | — | — |
| Kangiella aquimarina DSM 16071 | 0.78 | B158DRAFT_1531 | | protein RecA | 0.49 | B158DRAFT_2479 | | DNA-binding protein, YbaB/EbfC family | 0.49 | 36 |
| Cupriavidus basilensis FW507-4G11 | 0.78 | RR42_RS03080 | | recombinase RecA | 0.73 | RR42_RS13280 | | hypothetical protein | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.78 | ABZR86_RS00660 | | recombinase RecA | 0.59 | ABZR86_RS06240 | | YbaB/EbfC family nucleoid-associated protein | — | — |
| Castellaniella sp019104865 MT123 | 0.77 | ABCV34_RS04460 | | recombinase RecA | 0.67 | ABCV34_RS15475 | | YbaB/EbfC family nucleoid-associated protein | — | — |
| Alteromonas macleodii MIT1002 | 0.77 | MIT1002_00955 | | Recombinase A | 0.69 | MIT1002_02653 | | Nucleoid-associated protein YbaB | low | > 70 |
| Acinetobacter radioresistens SK82 | 0.75 | MPMX26_01308 | | Protein RecA | 0.48 | MPMX26_01644 | | Nucleoid-associated protein YbaB | low | > 36 |
| Ralstonia sp. UNC404CL21Col | 0.75 | ABZR87_RS07965 | | recombinase RecA | 0.70 | ABZR87_RS10800 | | YbaB/EbfC family nucleoid-associated protein | low | > 80 |
| Ralstonia solanacearum UW163 | 0.75 | UW163_RS01625 | | recombinase RecA | 0.70 | UW163_RS12630 | | nucleoid-associated protein, YbaB/EbfC family | — | — |
| Ralstonia solanacearum PSI07 | 0.75 | RPSI07_RS21260 | | recombinase RecA | 0.69 | RPSI07_RS18215 | | YbaB/EbfC family nucleoid-associated protein | — | — |
| Pseudomonas putida KT2440 | 0.75 | PP_1629 | | Protein RecA | 0.70 | PP_4268 | | nucleoid-associated broad specificity regulator | low | > 96 |
| Ralstonia solanacearum IBSBF1503 | 0.75 | RALBFv3_RS12010 | | recombinase RecA | 0.70 | RALBFv3_RS15160 | | nucleoid-associated protein, YbaB/EbfC family | — | — |
| Ralstonia solanacearum GMI1000 | 0.75 | RS_RS02760 | | DNA recombination/repair protein RecA | 0.70 | RS_RS05975 | | YbaB/EbfC family nucleoid-associated protein | — | — |
| Variovorax sp. SCN45 | 0.75 | GFF5390 | | RecA protein | 0.69 | GFF1109 | | Nucleoid-associated protein YaaK | — | — |
| Variovorax sp. OAS795 | 0.75 | ABID97_RS02275 | | recombinase RecA | 0.69 | ABID97_RS14695 | | YbaB/EbfC family nucleoid-associated protein | — | — |
| Pseudomonas stutzeri RCH2 | 0.75 | Psest_2872 | | protein RecA | 0.69 | Psest_2546 | | DNA-binding protein, YbaB/EbfC family | — | — |
| Acidovorax sp. GW101-3H11 | 0.75 | Ac3H11_1255 | | RecA protein | 0.64 | Ac3H11_472 | | FIG000557: hypothetical protein co-occurring with RecR | — | — |
| Pseudomonas fluorescens SBW25 | 0.74 | PFLU_RS05885 | | recombinase RecA | 0.65 | PFLU_RS22425 | | YbaB/EbfC family nucleoid-associated protein | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.74 | PFLU_RS05885 | | recombinase RecA | 0.65 | PFLU_RS22425 | | YbaB/EbfC family nucleoid-associated protein | — | — |
| Pseudomonas simiae WCS417 | 0.74 | PS417_05815 | | recombinase RecA | 0.65 | PS417_20810 | | hypothetical protein | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.74 | Xcc-8004.3111.1 | | RecA protein | 0.60 | Xcc-8004.4013.1 | | FIG000557: hypothetical protein co-occurring with RecR | — | — |
| Lysobacter sp. OAE881 | 0.74 | ABIE51_RS07800 | | recombinase RecA | 0.59 | ABIE51_RS14015 | | YbaB/EbfC family nucleoid-associated protein | — | — |
| Marinobacter adhaerens HP15 | 0.74 | HP15_1048 | | recombinase A | 0.61 | HP15_1884 | | protein belonging to uncharacterized protein family UPF0133 | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.74 | Psyr_1378 | | RecA protein | 0.66 | Psyr_1826 | | Conserved hypothetical protein 103 | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.74 | Psyr_1378 | | RecA protein | 0.66 | Psyr_1826 | | Conserved hypothetical protein 103 | — | — |
| Shewanella oneidensis MR-1 | 0.74 | SO3430 | recA | recA protein (NCBI ptt file) | 0.59 | SO2014 | | conserved hypothetical protein TIGR00103 (NCBI ptt file) | 0.42 | 32 |
| Herbaspirillum seropedicae SmR1 | 0.74 | HSERO_RS03270 | | protein RecA | 0.75 | HSERO_RS18365 | | hypothetical protein | low | > 78 |
| Pseudomonas sp. S08-1 | 0.73 | OH686_18205 | | protein RecA | 0.71 | OH686_02390 | | DNA-binding protein, YbaB/EbfC family | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.73 | GFF2500 | | RecA protein | 0.65 | GFF4252 | | FIG000557: hypothetical protein co-occurring with RecR | 0.61 | 61 |
| Pseudomonas fluorescens FW300-N1B4 | 0.73 | Pf1N1B4_3143 | | RecA protein | 0.66 | Pf1N1B4_3863 | | FIG000557: hypothetical protein co-occurring with RecR | — | — |
| Erwinia tracheiphila SCR3 | 0.73 | LU632_RS15735 | recA | recombinase RecA | 0.59 | LU632_RS18110 | | YbaB/EbfC family nucleoid-associated protein | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.73 | AO353_16805 | | recombinase RecA | 0.66 | AO353_00680 | | nucleoid-associated protein | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.73 | PfGW456L13_4668 | | RecA protein | 0.64 | PfGW456L13_4076 | | FIG000557: hypothetical protein co-occurring with RecR | — | — |
| Shewanella sp. ANA-3 | 0.73 | Shewana3_1126 | recA | recombinase A (RefSeq) | 0.60 | Shewana3_2445 | | hypothetical protein (RefSeq) | low | > 73 |
| Pectobacterium carotovorum WPP14 | 0.73 | HER17_RS05045 | | recombinase RecA | 0.51 | HER17_RS15700 | | YbaB/EbfC family nucleoid-associated protein | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.73 | GFF4693 | | RecA protein | 0.64 | GFF4389 | | FIG000557: hypothetical protein co-occurring with RecR | — | — |
| Escherichia fergusonii Becca | 0.73 | EFB2_01225 | | Protein RecA | 0.64 | EFB2_03587 | | Nucleoid-associated protein YbaB | low | > 86 |
| Pseudomonas fluorescens FW300-N2E2 | 0.73 | Pf6N2E2_2993 | | RecA protein | 0.66 | Pf6N2E2_2327 | | FIG000557: hypothetical protein co-occurring with RecR | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.73 | CSW01_02875 | | DNA recombination/repair protein RecA | 0.65 | CSW01_05370 | | YbaB/EbfC family nucleoid-associated protein | low | > 62 |
| Escherichia coli ECRC101 | 0.73 | MCAODC_11230 | recA | recombinase RecA | 0.64 | MCAODC_27385 | ybaB | YbaB/EbfC family nucleoid-associated protein | — | — |
| Escherichia coli BL21 | 0.73 | ECD_02549 | | DNA recombination and repair protein; ssDNA-dependent ATPase; synaptase; ssDNA and dsDNA binding protein; ATP-dependent homologous DNA strand exchanger; recombinase A; LexA autocleavage cofactor | 0.64 | ECD_00422 | | DNA-binding protein, putative nucleoid-associated protein | — | — |
| Escherichia coli ECRC99 | 0.73 | KEDOAH_07430 | recA | recombinase RecA | 0.64 | KEDOAH_19805 | ybaB | YbaB/EbfC family nucleoid-associated protein | — | — |
| Escherichia coli ECOR27 | 0.73 | NOLOHH_12545 | recA | recombinase RecA | 0.64 | NOLOHH_01090 | ybaB | YbaB/EbfC family nucleoid-associated protein | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.73 | AO356_05670 | | recombinase RecA | 0.66 | AO356_02505 | | nucleoid-associated protein | — | — |
| Escherichia coli Nissle 1917 | 0.73 | ECOLIN_RS15060 | | recombinase RecA | 0.64 | ECOLIN_RS02800 | | YbaB/EbfC family nucleoid-associated protein | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.73 | OHPLBJKB_01035 | | Protein RecA | 0.64 | OHPLBJKB_03203 | | Nucleoid-associated protein YbaB | — | — |
| Dickeya dadantii 3937 | 0.73 | DDA3937_RS16245 | | recombinase RecA | 0.64 | DDA3937_RS05785 | | YbaB/EbfC family nucleoid-associated protein | — | — |
| Pseudomonas sp. RS175 | 0.73 | PFR28_00472 | | Protein RecA | 0.67 | PFR28_01075 | | Nucleoid-associated protein YbaB | — | — |
| Escherichia coli ECOR38 | 0.73 | HEPCGN_19900 | recA | recombinase RecA | 0.64 | HEPCGN_06775 | ybaB | YbaB/EbfC family nucleoid-associated protein | — | — |
| Escherichia coli ECRC98 | 0.73 | JDDGAC_24370 | recA | recombinase RecA | 0.64 | JDDGAC_11810 | ybaB | YbaB/EbfC family nucleoid-associated protein | — | — |
| Escherichia coli ECRC102 | 0.73 | NIAGMN_18475 | recA | recombinase RecA | 0.64 | NIAGMN_06215 | ybaB | YbaB/EbfC family nucleoid-associated protein | — | — |
| Escherichia coli ECRC62 | 0.73 | BNILDI_11105 | recA | recombinase RecA | 0.64 | BNILDI_22510 | ybaB | YbaB/EbfC family nucleoid-associated protein | — | — |
| Escherichia coli ECRC101 | 0.73 | OKFHMN_20705 | recA | recombinase RecA | 0.64 | OKFHMN_08160 | ybaB | YbaB/EbfC family nucleoid-associated protein | — | — |
| Klebsiella michiganensis M5al | 0.73 | BWI76_RS22180 | | recombinase RecA | 0.52 | BWI76_RS06825 | | nucleoid-associated protein, YbaB/EbfC family | — | — |
| Escherichia coli BW25113 | 0.73 | b2699 | recA | recombinase A (NCBI) | 0.64 | b0471 | ybaB | hypothetical protein (NCBI) | low | > 76 |
| Rahnella sp. WP5 | 0.72 | EX31_RS07800 | | recombinase RecA | 0.64 | EX31_RS22520 | | YbaB/EbfC family nucleoid-associated protein | — | — |
| Dickeya dianthicola 67-19 | 0.72 | HGI48_RS16355 | | recombinase RecA | 0.64 | HGI48_RS05835 | | YbaB/EbfC family nucleoid-associated protein | — | — |
| Dickeya dianthicola ME23 | 0.72 | DZA65_RS17450 | | recombinase RecA | 0.64 | DZA65_RS06160 | | YbaB/EbfC family nucleoid-associated protein | — | — |
| Pantoea sp. MT58 | 0.72 | IAI47_04300 | | recombinase RecA | 0.62 | IAI47_14470 | | YbaB/EbfC family nucleoid-associated protein | low | > 76 |
| Enterobacter asburiae PDN3 | 0.72 | EX28DRAFT_2785 | | protein RecA | 0.60 | EX28DRAFT_2486 | | DNA-binding protein, YbaB/EbfC family | — | — |
| Rhodopseudomonas palustris CGA009 | 0.72 | TX73_019940 | | recombinase RecA | 0.39 | TX73_003190 | | YbaB/EbfC family nucleoid-associated protein | — | — |
| Enterobacter sp. TBS_079 | 0.72 | MPMX20_03580 | | Protein RecA | 0.59 | MPMX20_01073 | | Nucleoid-associated protein YbaB | low | > 85 |
| Magnetospirillum magneticum AMB-1 | 0.72 | AMB_RS03205 | | DNA recombination/repair protein RecA | 0.44 | AMB_RS20750 | | YbaB/EbfC family nucleoid-associated protein | low | > 64 |
| Serratia liquefaciens MT49 | 0.72 | IAI46_03840 | | recombinase RecA | 0.50 | IAI46_05235 | | YbaB/EbfC family nucleoid-associated protein | — | — |
| Azospirillum brasilense Sp245 | 0.72 | AZOBR_RS11095 | | recombinase RecA | 0.34 | AZOBR_RS03875 | | hypothetical protein | — | — |
| Shewanella amazonensis SB2B | 0.71 | Sama_1046 | recA | recombinase A (RefSeq) | 0.62 | Sama_1311 | | hypothetical protein (RefSeq) | — | — |
| Rhizobium sp. OAE497 | 0.71 | ABIE40_RS10320 | | recombinase RecA | 0.41 | ABIE40_RS00285 | | YbaB/EbfC family nucleoid-associated protein | — | — |
| Shewanella loihica PV-4 | 0.71 | Shew_1215 | recA | recombinase A (RefSeq) | 0.64 | Shew_2234 | | hypothetical protein (RefSeq) | — | — |
| Azospirillum sp. SherDot2 | 0.71 | MPMX19_00869 | | Protein RecA | 0.35 | MPMX19_02194 | | Nucleoid-associated protein YbaB | — | — |
| Agrobacterium fabrum C58 | 0.71 | Atu1874 | | RecA protein | 0.45 | Atu0095 | | hypothetical protein | low | > 89 |
| Phaeobacter inhibens DSM 17395 | 0.71 | PGA1_c15260 | | protein recA (recombinase A) | 0.38 | PGA1_c30280 | | DNA-binding protein, YbaB/EbfC family | low | > 62 |
| Rhodospirillum rubrum S1H | 0.70 | Rru_A2819 | | RecA DNA recombination protein (NCBI) | 0.45 | Rru_A3472 | | hypothetical protein (NCBI) | — | — |
| Sinorhizobium meliloti 1021 | 0.70 | SMc00760 | | recombinase A | 0.39 | SMc02906 | | hypothetical protein | low | > 103 |
| Sphingomonas koreensis DSMZ 15582 | 0.69 | Ga0059261_0204 | | protein RecA | 0.37 | Ga0059261_0668 | | DNA-binding protein, YbaB/EbfC family | — | — |
| Bosea sp. OAE506 | 0.68 | ABIE41_RS13335 | | recombinase RecA | 0.49 | ABIE41_RS04030 | | YbaB/EbfC family nucleoid-associated protein | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.65 | CA264_19695 | | DNA recombination/repair protein RecA | 0.30 | CA264_04550 | | nucleoid-associated protein, YbaB/EbfC family | — | — |
| Dinoroseobacter shibae DFL-12 | 0.65 | Dshi_1643 | | recA protein (RefSeq) | 0.41 | Dshi_0649 | | hypothetical protein (RefSeq) | 0.56 | 9 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.64 | DVU1090 | recA | recA protein (TIGR) | 0.33 | DVU3199 | | conserved hypothetical protein TIGR00103 (TIGR) | low | > 55 |
| Desulfovibrio vulgaris Miyazaki F | 0.63 | DvMF_0876 | recA | recombinase A (RefSeq) | 0.35 | DvMF_2270 | | hypothetical protein (RefSeq) | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.61 | Echvi_0044 | | protein RecA | 0.30 | Echvi_4060 | | DNA-binding protein, YbaB/EbfC family | — | — |
| Fusobacterium nucleatum SB010 | 0.57 | HUW76_07355 | | recombinase RecA | 0.26 | HUW76_03900 | | YbaB/EbfC family nucleoid-associated protein | low | > 35 |
Not shown: 13 genomes with orthologs for Dsui_0707 only; 0 genomes with orthologs for Dsui_1810 only