Conservation of cofitness between CSW01_03865 and CSW01_09905 in Vibrio cholerae E7946 ATCC 55056

93 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03865 protein translocase subunit SecF 1.0 CSW01_09905 long-chain-fatty-acid--CoA ligase FadD 0.41 16
Alteromonas macleodii MIT1002 0.66 MIT1002_02810 preprotein translocase subunit SecF 0.61 MIT1002_02588 Long-chain-fatty-acid--CoA ligase low > 70
Serratia liquefaciens MT49 0.63 IAI46_04855 protein translocase subunit SecF 0.75 IAI46_14535 long-chain-fatty-acid--CoA ligase FadD — —
Rahnella sp. WP5 0.61 EX31_RS22110 protein translocase subunit SecF 0.75 EX31_RS10600 long-chain-fatty-acid--CoA ligase FadD — —
Dickeya dianthicola ME23 0.60 DZA65_RS05870 protein translocase subunit SecF 0.73 DZA65_RS11605 long-chain-fatty-acid--CoA ligase FadD — —
Dickeya dianthicola 67-19 0.60 HGI48_RS05545 protein translocase subunit SecF 0.73 HGI48_RS11260 long-chain-fatty-acid--CoA ligase FadD — —
Erwinia amylovora T8 0.59 OLJFJH_18110 protein translocase subunit SecF 0.70 OLJFJH_13100 long-chain-fatty-acid--CoA ligase FadD — —
Shewanella oneidensis MR-1 0.59 SO3110 secF-2 protein-export membrane protein SecF (NCBI ptt file) 0.71 SO2581 fadD-1 long-chain-fatty-acid--CoA ligase (NCBI ptt file) low > 76
Enterobacter asburiae PDN3 0.59 EX28DRAFT_2562 protein-export membrane protein, SecD/SecF family 0.72 EX28DRAFT_0753 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II — —
Klebsiella pneumoniae MKP103 0.59 KDGMDA_14410 protein translocase subunit SecF 0.71 KDGMDA_25120 long-chain-fatty-acid--CoA ligase FadD — —
Klebsiella pneumoniae MRSN742743 0.59 GJGHJB_03910 secF Protein-export membrane protein SecF 0.71 GJGHJB_01855 fadD long-chain-fatty-acid--CoA ligase FadD — —
Shewanella amazonensis SB2B 0.58 Sama_2190 secF preprotein translocase subunit SecF (RefSeq) 0.70 Sama_1934 long-chain-fatty-acid--CoA ligase (RefSeq) low > 62
Escherichia coli BL21 0.58 ECD_00357 SecYEG protein translocase auxillary subunit 0.72 ECD_01775 acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) — —
Escherichia coli ECRC62 0.58 BNILDI_22840 secF Protein translocase subunit SecF 0.72 BNILDI_15900 fadD long-chain-fatty-acid--CoA ligase FadD — —
Escherichia coli ECRC102 0.58 NIAGMN_06545 secF Protein translocase subunit SecF 0.72 NIAGMN_01470 fadD long-chain-fatty-acid--CoA ligase FadD — —
Escherichia coli ECRC98 0.58 JDDGAC_12145 secF Protein translocase subunit SecF 0.72 JDDGAC_01170 fadD long-chain-fatty-acid--CoA ligase FadD — —
Escherichia coli Nissle 1917 0.58 ECOLIN_RS02480 protein translocase subunit SecF 0.72 ECOLIN_RS10040 long-chain-fatty-acid--CoA ligase FadD — —
Escherichia coli ECRC101 0.58 MCAODC_27715 secF Protein translocase subunit SecF 0.72 MCAODC_18815 fadD long-chain-fatty-acid--CoA ligase FadD — —
Escherichia coli ECOR38 0.58 HEPCGN_07130 secF Protein translocase subunit SecF 0.72 HEPCGN_04985 fadD long-chain-fatty-acid--CoA ligase FadD — —
Escherichia coli BW25113 0.58 b0409 secF protein export protein SecF (NCBI) 0.72 b1805 fadD acyl-CoA synthase (NCBI) — —
Escherichia coli ECOR27 0.58 NOLOHH_01425 secF Protein translocase subunit SecF 0.72 NOLOHH_17115 fadD long-chain-fatty-acid--CoA ligase FadD — —
Escherichia coli ECRC100 0.58 OKFHMN_08490 secF Protein translocase subunit SecF 0.72 OKFHMN_26595 fadD long-chain-fatty-acid--CoA ligase FadD — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.58 OHPLBJKB_03267 Protein translocase subunit SecF 0.72 OHPLBJKB_01928 Long-chain-fatty-acid--CoA ligase — —
Escherichia fergusonii Becca 0.58 EFB2_03648 Protein translocase subunit SecF 0.72 EFB2_02195 Long-chain-fatty-acid--CoA ligase — —
Escherichia coli ECRC99 0.58 KEDOAH_19475 secF Protein translocase subunit SecF 0.72 KEDOAH_01515 fadD long-chain-fatty-acid--CoA ligase FadD — —
Klebsiella michiganensis M5al 0.58 BWI76_RS06315 protein translocase subunit SecF 0.71 BWI76_RS17800 long-chain-fatty-acid--CoA ligase — —
Pantoea agglomerans CFBP13505 P0401 0.58 PagCFBP13516_RS15040 secF protein translocase subunit SecF 0.70 PagCFBP13516_RS08970 fadD long-chain-fatty-acid--CoA ligase FadD — —
Shewanella sp. ANA-3 0.57 Shewana3_1438 secF preprotein translocase subunit SecF (RefSeq) 0.73 Shewana3_2386 long-chain-fatty-acid--CoA ligase (RefSeq) low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.57 GFF4308 Protein-export membrane protein SecF (TC 3.A.5.1.1) 0.71 GFF2820 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) — —
Pantoea sp. MT58 0.57 IAI47_14790 protein translocase subunit SecF 0.70 IAI47_08835 long-chain-fatty-acid--CoA ligase FadD — —
Pectobacterium carotovorum WPP14 0.57 HER17_RS15975 protein translocase subunit SecF 0.72 HER17_RS11275 long-chain-fatty-acid--CoA ligase FadD — —
Shewanella loihica PV-4 0.57 Shew_2334 secF preprotein translocase subunit SecF (RefSeq) 0.71 Shew_2188 long-chain-fatty-acid--CoA ligase (RefSeq) — —
Enterobacter sp. TBS_079 0.57 MPMX20_01000 Protein translocase subunit SecF 0.71 MPMX20_02711 Long-chain-fatty-acid--CoA ligase — —
Kangiella aquimarina DSM 16071 0.55 B158DRAFT_2519 protein-export membrane protein, SecD/SecF family 0.61 B158DRAFT_1573 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II — —
Pseudomonas stutzeri RCH2 0.47 Psest_1245 protein-export membrane protein, SecD/SecF family 0.53 Psest_1335 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (from data) — —
Pseudomonas sp. BP01 0.46 JOY50_RS22850 secF protein translocase subunit SecF 0.54 JOY50_RS01310 fadD1 long-chain-fatty-acid--CoA ligase FadD1 — —
Pseudomonas fluorescens GW456-L13 0.46 PfGW456L13_4879 Protein-export membrane protein SecF (TC 3.A.5.1.1) 0.53 PfGW456L13_1911 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) — —
Pseudomonas putida KT2440 0.46 PP_0836 Sec translocation complex subunit SecF 0.53 PP_4549 long-chain-fatty-acid/CoA ligase — —
Pseudomonas sp. RS175 0.46 PFR28_00280 Protein translocase subunit SecF 0.53 PFR28_00585 Long-chain-fatty-acid--CoA ligase — —
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_3195 Protein-export membrane protein SecF (TC 3.A.5.1.1) 0.53 Pf6N2E2_2872 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) — —
Pseudomonas segetis P6 0.46 ACVTMO_RS07435 secF protein translocase subunit SecF 0.54 ACVTMO_RS16220 fadD1 long-chain-fatty-acid--CoA ligase FadD1 — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_1231 protein translocase subunit secF 0.53 Psyr_3834 AMP-dependent synthetase and ligase — —
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_1231 protein translocase subunit secF 0.53 Psyr_3834 AMP-dependent synthetase and ligase — —
Pseudomonas fluorescens FW300-N1B4 0.45 Pf1N1B4_3009 Protein-export membrane protein SecF (TC 3.A.5.1.1) 0.45 Pf1N1B4_575 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) — —
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_15805 preprotein translocase subunit SecF 0.53 AO353_03310 long-chain fatty acid--CoA ligase — —
Pseudomonas protegens RBAN4 0.44 FABNJH_25150 secF Protein-export membrane protein SecF 0.54 FABNJH_23735 Long-chain-fatty-acid--CoA ligase — —
Pseudomonas fluorescens SBW25 0.44 PFLU_RS24885 protein translocase subunit SecF 0.52 PFLU_RS23680 long-chain fatty acid--CoA ligase — —
Pseudomonas fluorescens SBW25-INTG 0.44 PFLU_RS24885 protein translocase subunit SecF 0.52 PFLU_RS23680 long-chain fatty acid--CoA ligase — —
Pseudomonas simiae WCS417 0.44 PS417_23230 preprotein translocase subunit SecF 0.53 PS417_22065 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (from data) — —
Pseudomonas sp. S08-1 0.44 OH686_17445 Protein translocase subunit SecF 0.55 OH686_05750 Long-chain-fatty-acid--CoA ligase — —
Pseudomonas sp. DMC3 0.44 GFF4356 Protein translocase subunit SecF 0.53 GFF5130 Long-chain-fatty-acid--CoA ligase — —
Pseudomonas orientalis W4I3 0.44 QF045_RS25450 protein translocase subunit SecF 0.53 QF045_RS14350 AMP-binding protein — —
Pseudomonas fluorescens FW300-N2C3 0.44 AO356_06675 preprotein translocase subunit SecF 0.53 AO356_05100 long-chain fatty acid--CoA ligase — —
Dechlorosoma suillum PS 0.43 Dsui_3326 protein-export membrane protein, SecD/SecF family 0.59 Dsui_3212 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II — —
Pseudomonas aeruginosa PUPa3 0.43 NPBIFN_01159 secF Protein translocase subunit SecF 0.53 NPBIFN_01697 long-chain-fatty-acid--CoA ligase — —
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS06225 preprotein translocase subunit SecF 0.54 HSERO_RS19285 long-chain fatty acid--CoA ligase — —
Pseudomonas aeruginosa MRSN321 0.43 PFGADD_01141 secF Protein translocase subunit SecF 0.53 PFGADD_01661 long-chain-fatty-acid--CoA ligase — —
Castellaniella sp019104865 MT123 0.43 ABCV34_RS15350 protein translocase subunit SecF 0.55 ABCV34_RS11410 AMP-binding protein — —
Pseudomonas aeruginosa PA14 0.43 IKLFDK_19670 Protein translocase subunit SecF 0.53 IKLFDK_16900 long-chain-fatty-acid--CoA ligase — —
Pseudomonas sp. SVBP6 0.43 COO64_RS03865 secF protein translocase subunit SecF 0.54 COO64_RS22015 fadD1 long-chain-fatty-acid--CoA ligase FadD1 — —
Marinobacter adhaerens HP15 0.42 HP15_1482 preprotein translocase subunit SecF 0.52 HP15_1864 acyl-CoA synthase — —
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS17415 preprotein translocase subunit SecF 0.55 RR42_RS18150 long-chain fatty acid--CoA ligase — —
Paraburkholderia graminis OAS925 0.41 ABIE53_000828 preprotein translocase subunit SecF 0.54 ABIE53_002420 long-chain acyl-CoA synthetase — —
Paraburkholderia sabiae LMG 24235 0.41 QEN71_RS26655 protein translocase subunit SecF 0.53 QEN71_RS22975 AMP-binding protein — —
Acidovorax sp. GW101-3H11 0.41 Ac3H11_4413 Protein-export membrane protein SecF (TC 3.A.5.1.1) 0.53 Ac3H11_663 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) — —
Ralstonia sp. UNC404CL21Col 0.41 ABZR87_RS01295 protein translocase subunit SecF 0.55 ABZR87_RS07805 AMP-binding protein — —
Ralstonia solanacearum IBSBF1503 0.41 RALBFv3_RS05700 protein translocase subunit SecF 0.54 RALBFv3_RS11850 long-chain fatty acid--CoA ligase — —
Acinetobacter baumannii LAC-4 0.41 RR41_RS02910 protein translocase subunit SecF 0.52 RR41_RS17925 long-chain-fatty-acid--CoA ligase — —
Ralstonia solanacearum PSI07 0.41 RPSI07_RS11600 protein translocase subunit SecF 0.54 RPSI07_RS21355 long-chain fatty acid--CoA ligase — —
Ralstonia solanacearum UW163 0.41 UW163_RS07925 protein translocase subunit SecF 0.54 UW163_RS01735 long-chain fatty acid--CoA ligase — —
Paraburkholderia bryophila 376MFSha3.1 0.41 H281DRAFT_04667 protein translocase subunit secF 0.54 H281DRAFT_05129 long-chain acyl-CoA synthetase — —
Burkholderia phytofirmans PsJN 0.41 BPHYT_RS03425 preprotein translocase subunit SecF 0.54 BPHYT_RS17295 long-chain fatty acid--CoA ligase — —
Ralstonia solanacearum GMI1000 0.40 RS_RS13590 protein translocase subunit SecF 0.53 RS_RS14290 long-chain-fatty-acid--CoA ligase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.40 GFF2569 Protein-export membrane protein SecF (TC 3.A.5.1.1) 0.53 GFF2607 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) — —
Variovorax sp. SCN45 0.39 GFF5486 Protein translocase subunit SecF 0.53 GFF7283 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) — —
Variovorax sp. OAS795 0.39 ABID97_RS01845 protein translocase subunit SecF 0.53 ABID97_RS04445 long-chain-fatty-acid--CoA ligase — —
Acinetobacter radioresistens SK82 0.39 MPMX26_00435 Protein translocase subunit SecF 0.52 MPMX26_00141 Long-chain-fatty-acid--CoA ligase — —
Rhodanobacter denitrificans FW104-10B01 0.39 LRK54_RS03115 protein translocase subunit SecF 0.59 LRK54_RS00795 long-chain-fatty-acid--CoA ligase — —
Rhodanobacter denitrificans MT42 0.38 LRK55_RS02865 protein translocase subunit SecF 0.59 LRK55_RS00570 long-chain-fatty-acid--CoA ligase — —
Rhodanobacter sp000427505 FW510-R12 0.38 LRK53_RS06855 protein translocase subunit SecF 0.58 LRK53_RS09335 long-chain-fatty-acid--CoA ligase — —
Rhodanobacter sp. FW510-T8 0.38 OKGIIK_09985 secF protein translocase subunit SecF 0.58 OKGIIK_06445 menE,fadK long-chain-fatty-acid--CoA ligase — —
Phaeobacter inhibens DSM 17395 0.37 PGA1_c18910 protein-export membrane protein SecF 0.33 PGA1_c25300 long-chain-fatty-acid--CoA ligase FadD — —
Dyella japonica UNC79MFTsu3.2 0.37 ABZR86_RS09525 protein translocase subunit SecF 0.58 ABZR86_RS02155 AMP-binding protein — —
Desulfovibrio vulgaris Miyazaki F 0.36 DvMF_0540 secF preprotein translocase subunit SecF (RefSeq) 0.30 DvMF_0256 AMP-dependent synthetase and ligase (RefSeq) — —
Dinoroseobacter shibae DFL-12 0.35 Dshi_1858 protein-export membrane protein SecF (RefSeq) 0.42 Dshi_1000 AMP-dependent synthetase and ligase (RefSeq) — —
Rhodopseudomonas palustris CGA009 0.35 TX73_014655 protein translocase subunit SecF 0.53 TX73_022105 long-chain fatty acid--CoA ligase low > 86
Bosea sp. OAE506 0.33 ABIE41_RS15045 protein translocase subunit SecF 0.46 ABIE41_RS11685 AMP-binding protein — —
Lysobacter sp. OAE881 0.32 ABIE51_RS15005 protein translocase subunit SecF 0.60 ABIE51_RS11545 long-chain fatty acid--CoA ligase — —
Xanthomonas campestris pv. campestris strain 8004 0.31 Xcc-8004.2171.1 Protein-export membrane protein SecF (TC 3.A.5.1.1) 0.58 Xcc-8004.2896.1 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) — —
Azospirillum sp. SherDot2 0.31 MPMX19_01163 Protein translocase subunit SecF 0.30 MPMX19_02151 Long-chain-fatty-acid--CoA ligase — —
Desulfovibrio vulgaris Hildenborough JW710 0.29 DVU1818 secF protein-export membrane protein SecF (TIGR) 0.30 DVU1453 fadD long-chain-fatty-acid--CoA ligase (TIGR) — —
Rhodospirillum rubrum S1H 0.28 Rru_A1763 SecF protein (NCBI) 0.27 Rru_A1312 AMP-dependent synthetase and ligase (NCBI) low > 58
Azospirillum brasilense Sp245 0.28 AZOBR_RS15425 preprotein translocase subunit SecF 0.27 AZOBR_RS31155 AMP-dependent synthetase — —
Sphingobium sp. HT1-2 0.27 GFF3179 Protein translocase subunit SecF 0.25 GFF4751 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) — —

Not shown: 13 genomes with orthologs for CSW01_03865 only; 4 genomes with orthologs for CSW01_09905 only