Conservation of cofitness between CSW01_01825 and CSW01_03705 in Vibrio cholerae E7946 ATCC 55056

95 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01825 DNA mismatch repair protein MutL 1.0 CSW01_03705 chaperone protein ClpB 0.59 2
Pantoea sp. MT58 0.46 IAI47_02580 DNA mismatch repair endonuclease MutL 0.77 IAI47_04435 ATP-dependent chaperone ClpB low > 76
Erwinia tracheiphila SCR3 0.46 LU632_RS02045 mutL DNA mismatch repair endonuclease MutL 0.76 LU632_RS16935 clpB ATP-dependent chaperone ClpB low > 74
Erwinia amylovora T8 0.45 OLJFJH_02510 DNA mismatch repair endonuclease MutL 0.76 OLJFJH_09740 ATP-dependent chaperone ClpB low > 58
Dickeya dadantii 3937 0.45 DDA3937_RS18620 DNA mismatch repair endonuclease MutL 0.77 DDA3937_RS16100 ATP-dependent chaperone ClpB low > 74
Serratia liquefaciens MT49 0.45 IAI46_01615 DNA mismatch repair endonuclease MutL 0.77 IAI46_03995 ATP-dependent chaperone ClpB 0.39 24
Dickeya dianthicola ME23 0.44 DZA65_RS19690 DNA mismatch repair endonuclease MutL 0.78 DZA65_RS17320 ATP-dependent chaperone ClpB low > 75
Dickeya dianthicola 67-19 0.44 HGI48_RS18555 DNA mismatch repair endonuclease MutL 0.78 HGI48_RS16225 ATP-dependent chaperone ClpB low > 71
Pectobacterium carotovorum WPP14 0.44 HER17_RS02575 DNA mismatch repair endonuclease MutL 0.77 HER17_RS05410 ATP-dependent chaperone ClpB low > 75
Enterobacter sp. TBS_079 0.44 MPMX20_00451 DNA mismatch repair protein MutL 0.78 MPMX20_03461 Chaperone protein ClpB low > 85
Enterobacter asburiae PDN3 0.44 EX28DRAFT_3367 DNA mismatch repair protein MutL 0.78 EX28DRAFT_2693 ATP-dependent chaperone ClpB low > 76
Rahnella sp. WP5 0.44 EX31_RS08830 DNA mismatch repair endonuclease MutL 0.76 EX31_RS07560 ATP-dependent chaperone ClpB 0.49 41
Escherichia fergusonii Becca 0.44 EFB2_04365 DNA mismatch repair protein MutL 0.78 EFB2_01298 Chaperone protein ClpB low > 86
Klebsiella michiganensis M5al 0.44 BWI76_RS02525 DNA mismatch repair protein MutL 0.78 BWI76_RS21440 ATP-dependent chaperone ClpB 0.22 87
Escherichia coli BW25113 0.44 b4170 mutL DNA mismatch repair protein (NCBI) 0.78 b2592 clpB protein disaggregation chaperone (NCBI) low > 76
Escherichia coli BL21 0.44 ECD_04037 methyl-directed mismatch repair protein 0.78 ECD_02482 protein disaggregation chaperone low > 61
Escherichia coli ECRC62 0.43 BNILDI_06960 mutL DNA mismatch repair endonuclease MutL 0.78 BNILDI_11745 clpB ATP-dependent chaperone ClpB low > 75
Escherichia coli ECRC102 0.43 NIAGMN_10115 mutL DNA mismatch repair endonuclease MutL 0.78 NIAGMN_19035 clpB ATP-dependent chaperone ClpB — —
Escherichia coli Nissle 1917 0.43 ECOLIN_RS24220 DNA mismatch repair endonuclease MutL 0.78 ECOLIN_RS14665 ATP-dependent chaperone ClpB — —
Escherichia coli ECOR27 0.43 NOLOHH_04530 mutL DNA mismatch repair endonuclease MutL 0.78 NOLOHH_12940 clpB ATP-dependent chaperone ClpB low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_03872 DNA mismatch repair protein MutL 0.78 OHPLBJKB_01114 Chaperone protein ClpB low > 73
Escherichia coli ECOR38 0.43 HEPCGN_10495 mutL DNA mismatch repair endonuclease MutL 0.78 HEPCGN_20390 clpB ATP-dependent chaperone ClpB low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF823 DNA mismatch repair protein MutL 0.78 GFF4184 ClpB protein low > 78
Escherichia coli ECRC100 0.43 OKFHMN_12265 mutL DNA mismatch repair endonuclease MutL 0.78 OKFHMN_21265 clpB ATP-dependent chaperone ClpB low > 80
Escherichia coli ECRC101 0.43 MCAODC_02780 mutL DNA mismatch repair endonuclease MutL 0.78 MCAODC_11795 clpB ATP-dependent chaperone ClpB low > 87
Escherichia coli ECRC98 0.43 JDDGAC_15905 mutL DNA mismatch repair endonuclease MutL 0.78 JDDGAC_24930 clpB ATP-dependent chaperone ClpB low > 86
Escherichia coli ECRC99 0.43 KEDOAH_15890 mutL DNA mismatch repair endonuclease MutL 0.78 KEDOAH_06955 clpB ATP-dependent chaperone ClpB — —
Shewanella loihica PV-4 0.37 Shew_0564 DNA mismatch repair protein MutL (RefSeq) 0.80 Shew_2948 ATPase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.37 SO0601 mutL DNA mismatch repair protein MutL (NCBI ptt file) 0.80 SO3577 clpB clpB protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.37 Shewana3_0595 mutL DNA mismatch repair protein (RefSeq) 0.80 Shewana3_3169 ATPase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.36 Sama_3027 mutL DNA mismatch repair protein (RefSeq) 0.80 Sama_2603 clpB protein (RefSeq) low > 62
Marinobacter adhaerens HP15 0.35 HP15_2501 DNA mismatch repair protein mutL 0.74 HP15_529 protein disaggregation chaperone 0.59 20
Pseudomonas sp. S08-1 0.35 OH686_09480 DNA mismatch repair protein MutL 0.71 OH686_16420 ATP-dependent chaperone protein ClpB low > 80
Pseudomonas simiae WCS417 0.35 PS417_02480 DNA mismatch repair protein 0.71 PS417_03830 protein disaggregation chaperone 0.33 18
Pseudomonas fluorescens SBW25 0.35 PFLU_RS02560 DNA mismatch repair endonuclease MutL 0.71 PFLU_RS03880 ATP-dependent chaperone ClpB low > 109
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS02560 DNA mismatch repair endonuclease MutL 0.71 PFLU_RS03880 ATP-dependent chaperone ClpB low > 109
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_3616 DNA mismatch repair protein MutL 0.71 Pf6N2E2_5129 ClpB protein low > 103
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_1414 DNA mismatch repair protein MutL 0.71 Pf1N1B4_2824 ClpB protein low > 87
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_13135 DNA mismatch repair protein 0.70 AO353_14230 ATP-dependent chaperone ClpB low > 101
Pseudomonas sp. RS175 0.34 PFR28_05119 DNA mismatch repair protein MutL 0.71 PFR28_03746 Chaperone protein ClpB low > 88
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_0570 DNA mismatch repair protein MutL 0.70 Psyr_0728 AAA ATPase, central region:Clp, N terminal:Clp, N terminal low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_0570 DNA mismatch repair protein MutL 0.70 Psyr_0728 AAA ATPase, central region:Clp, N terminal:Clp, N terminal low > 86
Pseudomonas sp. BP01 0.34 JOY50_RS17220 mutL DNA mismatch repair endonuclease MutL 0.70 JOY50_RS27140 clpB ATP-dependent chaperone ClpB low > 84
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_156 DNA mismatch repair protein MutL 0.71 PfGW456L13_1495 ClpB protein low > 87
Pseudomonas putida KT2440 0.34 PP_4896 DNA mismatch repair protein MutL 0.70 PP_0625 Chaperone protein ClpB low > 96
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_08665 DNA mismatch repair protein 0.71 AO356_15935 ATP-dependent chaperone ClpB low > 104
Alteromonas macleodii MIT1002 0.32 MIT1002_03790 DNA mismatch repair protein MutL 0.78 MIT1002_02677 Heat shock protein F84.1 low > 70
Pseudomonas aeruginosa PA14 0.32 IKLFDK_28810 DNA mismatch repair endonuclease MutL 0.71 IKLFDK_00820 Chaperone protein ClpB low > 101
Pseudomonas sp. DMC3 0.32 GFF3218 DNA mismatch repair protein MutL 0.70 GFF4006 Chaperone protein ClpB low > 89
Rhodanobacter denitrificans MT42 0.30 LRK55_RS14865 DNA mismatch repair endonuclease MutL 0.69 LRK55_RS04735 ATP-dependent chaperone ClpB low > 63
Rhodanobacter denitrificans FW104-10B01 0.30 LRK54_RS15150 DNA mismatch repair endonuclease MutL 0.69 LRK54_RS04955 ATP-dependent chaperone ClpB low > 59
Dyella japonica UNC79MFTsu3.2 0.29 ABZR86_RS00855 DNA mismatch repair endonuclease MutL 0.70 ABZR86_RS10940 ATP-dependent chaperone ClpB low > 74
Rhodanobacter sp. FW510-T8 0.29 OKGIIK_03920 mutL DNA mismatch repair endonuclease MutL 0.69 OKGIIK_01800 clpB ATP-dependent chaperone ClpB low > 52
Methylophilus sp. DMC18 0.29 GFF1253 DNA mismatch repair protein MutL 0.68 GFF1788 Chaperone protein ClpB low > 43
Lysobacter sp. OAE881 0.28 ABIE51_RS08065 DNA mismatch repair endonuclease MutL 0.72 ABIE51_RS04925 ATP-dependent chaperone ClpB low > 62
Rhodanobacter sp000427505 FW510-R12 0.28 LRK53_RS13465 DNA mismatch repair endonuclease MutL 0.69 LRK53_RS05055 ATP-dependent chaperone ClpB low > 60
Xanthomonas campestris pv. campestris strain 8004 0.28 Xcc-8004.2256.1 DNA mismatch repair protein MutL 0.70 Xcc-8004.1382.1 ClpB protein low > 74
Ralstonia solanacearum UW163 0.27 UW163_RS08395 DNA mismatch repair endonuclease MutL 0.65 UW163_RS13360 ATP-dependent chaperone ClpB — —
Ralstonia solanacearum IBSBF1503 0.27 RALBFv3_RS05230 DNA mismatch repair endonuclease MutL 0.65 RALBFv3_RS00030 ATP-dependent chaperone ClpB low > 76
Dechlorosoma suillum PS 0.27 Dsui_1551 DNA mismatch repair protein MutL 0.67 Dsui_2161 ATP-dependent chaperone ClpB low > 51
Ralstonia solanacearum GMI1000 0.27 RS_RS12850 DNA mismatch repair protein MutL 0.65 RS_RS06695 chaperone protein ClpB low > 80
Ralstonia sp. UNC404CL21Col 0.26 ABZR87_RS00870 DNA mismatch repair endonuclease MutL 0.65 ABZR87_RS11485 ATP-dependent chaperone ClpB low > 80
Ralstonia solanacearum PSI07 0.26 RPSI07_RS12070 DNA mismatch repair endonuclease MutL 0.65 RPSI07_RS17450 ATP-dependent chaperone ClpB low > 81
Herbaspirillum seropedicae SmR1 0.26 HSERO_RS04190 DNA mismatch repair protein 0.65 HSERO_RS10545 protein disaggregation chaperone low > 78
Paraburkholderia sabiae LMG 24235 0.25 QEN71_RS26435 DNA mismatch repair endonuclease MutL 0.67 QEN71_RS22370 ATP-dependent chaperone ClpB low > 153
Acinetobacter radioresistens SK82 0.25 MPMX26_01207 DNA mismatch repair protein MutL 0.64 MPMX26_01096 Chaperone protein ClpB low > 36
Paraburkholderia bryophila 376MFSha3.1 0.25 H281DRAFT_04712 DNA mismatch repair protein MutL 0.67 H281DRAFT_00817 ATP-dependent Clp protease ATP-binding subunit ClpB low > 103
Variovorax sp. OAS795 0.24 ABID97_RS20310 DNA mismatch repair endonuclease MutL 0.63 ABID97_RS10930 ATP-dependent chaperone ClpB low > 91
Variovorax sp. SCN45 0.24 GFF4800 DNA mismatch repair protein MutL 0.63 GFF2792 Chaperone protein ClpB (ATP-dependent unfoldase) low > 127
Burkholderia phytofirmans PsJN 0.23 BPHYT_RS03650 DNA mismatch repair protein 0.67 BPHYT_RS08990 protein disaggregation chaperone low > 109
Acidovorax sp. GW101-3H11 0.23 Ac3H11_313 DNA mismatch repair protein MutL 0.65 Ac3H11_1474 ClpB protein low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.23 GFF5485 DNA mismatch repair protein MutL 0.64 GFF3942 ClpB protein low > 90
Castellaniella sp019104865 MT123 0.22 ABCV34_RS08785 DNA mismatch repair endonuclease MutL 0.62 ABCV34_RS06205 ATP-dependent chaperone ClpB low > 48
Rhodopseudomonas palustris CGA009 0.21 TX73_022655 DNA mismatch repair endonuclease MutL 0.56 TX73_023005 ATP-dependent chaperone ClpB low > 86
Rhodospirillum rubrum S1H 0.21 Rru_A2946 DNA mismatch repair protein (NCBI) 0.56 Rru_A0753 Chaperone clpB (NCBI) low > 58
Xanthobacter sp. DMC5 0.21 GFF67 DNA mismatch repair protein MutL 0.54 GFF3670 Chaperone protein ClpB — —
Brevundimonas sp. GW460-12-10-14-LB2 0.21 A4249_RS04225 DNA mismatch repair endonuclease MutL 0.56 A4249_RS11010 ATP-dependent chaperone ClpB low > 48
Mucilaginibacter yixingensis YX-36 DSM 26809 0.20 ABZR88_RS00380 DNA mismatch repair endonuclease MutL 0.53 ABZR88_RS10630 ATP-dependent chaperone ClpB — —
Rhizobium sp. OAE497 0.20 ABIE40_RS05235 DNA mismatch repair endonuclease MutL 0.57 ABIE40_RS17260 ATP-dependent chaperone ClpB low > 107
Phaeobacter inhibens DSM 17395 0.20 PGA1_c32740 DNA mismatch repair protein MutL 0.55 PGA1_c32440 chaperone protein ClpB low > 62
Pontibacter actiniarum KMM 6156, DSM 19842 0.20 CA264_13305 DNA mismatch repair protein MutL 0.52 CA264_14135 ATP-dependent chaperone ClpB — —
Dinoroseobacter shibae DFL-12 0.20 Dshi_0363 DNA mismatch repair protein MutL (RefSeq) 0.55 Dshi_0617 ATPase AAA-2 domain protein (RefSeq) low > 64
Pedobacter sp. GW460-11-11-14-LB5 0.20 CA265_RS17200 DNA mismatch repair protein MutL 0.51 CA265_RS12775 ATP-dependent chaperone ClpB low > 88
Caulobacter crescentus NA1000 Δfur 0.20 CCNA_00731 DNA mismatch repair protein mutL 0.56 CCNA_00922 ClpB protein low > 67
Caulobacter crescentus NA1000 0.20 CCNA_00731 DNA mismatch repair protein mutL 0.56 CCNA_00922 ClpB protein low > 66
Sinorhizobium meliloti 1021 0.19 SMc00932 DNA mismatch repair protein 0.55 SMc02433 ATP-dependent protease low > 103
Agrobacterium fabrum C58 0.19 Atu0699 DNA mismatch repair protein MutL 0.56 Atu4177 ATP-dependent Clp protease, ATP-binding subunit low > 89
Echinicola vietnamensis KMM 6221, DSM 17526 0.19 Echvi_0780 DNA mismatch repair protein MutL 0.50 Echvi_0754 ATP-dependent chaperone ClpB — —
Cellulophaga baltica 18 0.19 M666_RS11075 DNA mismatch repair endonuclease MutL 0.52 M666_RS14965 ATP-dependent chaperone ClpB low > 67
Phocaeicola vulgatus CL09T03C04 0.18 HMPREF1058_RS02970 DNA mismatch repair endonuclease MutL 0.51 HMPREF1058_RS04980 ATP-dependent chaperone ClpB low > 67
Phocaeicola dorei CL03T12C01 0.18 ABI39_RS02285 DNA mismatch repair endonuclease MutL 0.51 ABI39_RS18885 ATP-dependent chaperone ClpB low > 72
Parabacteroides merdae CL09T00C40 0.18 HMPREF1078_RS17005 DNA mismatch repair endonuclease MutL 0.52 HMPREF1078_RS00500 ATP-dependent chaperone ClpB low > 61
Fusobacterium nucleatum SB010 0.18 HUW76_07720 DNA mismatch repair endonuclease MutL 0.51 HUW76_09935 ATP-dependent chaperone ClpB low > 35
Bacteroides thetaiotaomicron VPI-5482 0.18 BT3851 DNA mismatch repair protein mutL (NCBI ptt file) 0.52 BT4597 endopeptidase Clp ATP-binding chain B (NCBI ptt file) — —
Bacteroides ovatus ATCC 8483 0.18 BACOVA_00344 DNA mismatch repair domain protein 0.53 BACOVA_05393 ATP-dependent chaperone protein ClpB — —
Bacteroides stercoris CC31F 0.18 HMPREF1181_RS07405 DNA mismatch repair endonuclease MutL 0.53 HMPREF1181_RS11960 ATP-dependent chaperone ClpB — —

Not shown: 0 genomes with orthologs for CSW01_01825 only; 16 genomes with orthologs for CSW01_03705 only