Conservation of cofitness between CSW01_05360 and CSW01_00335 in Vibrio cholerae E7946 ATCC 55056

98 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_05360 adenine phosphoribosyltransferase 1.0 CSW01_00335 phosphomethylpyrimidine synthase 0.42 12
Shewanella loihica PV-4 0.83 Shew_2236 adenine phosphoribosyltransferase (RefSeq) 0.74 Shew_2096 thiamine biosynthesis protein ThiC (RefSeq) low > 60
Shewanella amazonensis SB2B 0.82 Sama_1309 adenine phosphoribosyltransferase (RefSeq) 0.72 Sama_1860 thiamine biosynthesis protein ThiC (RefSeq) low > 62
Shewanella sp. ANA-3 0.81 Shewana3_2447 adenine phosphoribosyltransferase (RefSeq) 0.71 Shewana3_1936 thiamine biosynthesis protein ThiC (RefSeq) low > 73
Shewanella oneidensis MR-1 0.79 SO2012 apt adenine phosphoribosyltransferase (NCBI ptt file) 0.71 SO2445 thiC thiamin biosynthesis protein ThiC (NCBI ptt file) low > 76
Rahnella sp. WP5 0.77 EX31_RS22505 adenine phosphoribosyltransferase 0.76 EX31_RS16815 phosphomethylpyrimidine synthase ThiC low > 89
Serratia liquefaciens MT49 0.75 IAI46_05225 adenine phosphoribosyltransferase 0.75 IAI46_01320 phosphomethylpyrimidine synthase ThiC low > 87
Alteromonas macleodii MIT1002 0.75 MIT1002_02655 Adenine phosphoribosyltransferase 0.74 MIT1002_00097 Phosphomethylpyrimidine synthase low > 70
Enterobacter sp. TBS_079 0.75 MPMX20_01071 Adenine phosphoribosyltransferase 0.75 MPMX20_00217 Phosphomethylpyrimidine synthase low > 85
Klebsiella pneumoniae MKP103 0.75 KDGMDA_14875 adenine phosphoribosyltransferase 0.75 KDGMDA_10040 phosphomethylpyrimidine synthase ThiC low > 95
Dickeya dadantii 3937 0.75 DDA3937_RS05775 adenine phosphoribosyltransferase 0.75 DDA3937_RS01175 phosphomethylpyrimidine synthase ThiC low > 74
Dickeya dianthicola ME23 0.74 DZA65_RS06150 adenine phosphoribosyltransferase 0.75 DZA65_RS01215 phosphomethylpyrimidine synthase ThiC low > 75
Escherichia coli ECOR38 0.74 HEPCGN_06785 apt adenine phosphoribosyltransferase 0.74 HEPCGN_12010 thiC phosphomethylpyrimidine synthase ThiC low > 88
Escherichia coli BL21 0.74 ECD_00420 adenine phosphoribosyltransferase 0.74 ECD_03871 phosphomethylpyrimidine synthase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.74 OHPLBJKB_03205 Adenine phosphoribosyltransferase 0.74 OHPLBJKB_04056 Phosphomethylpyrimidine synthase 0.32 25
Escherichia coli BW25113 0.74 b0469 apt adenine phosphoribosyltransferase (NCBI) 0.74 b3994 thiC thiamine biosynthesis protein ThiC (NCBI) low > 76
Escherichia coli ECOR27 0.74 NOLOHH_01100 apt adenine phosphoribosyltransferase 0.75 NOLOHH_05520 thiC phosphomethylpyrimidine synthase ThiC low > 76
Escherichia coli ECRC62 0.74 BNILDI_22520 apt adenine phosphoribosyltransferase 0.74 BNILDI_06005 thiC phosphomethylpyrimidine synthase ThiC low > 75
Escherichia coli Nissle 1917 0.74 ECOLIN_RS02790 adenine phosphoribosyltransferase 0.74 ECOLIN_RS23040 phosphomethylpyrimidine synthase ThiC — —
Escherichia fergusonii Becca 0.74 EFB2_03589 Adenine phosphoribosyltransferase 0.74 EFB2_04617 Phosphomethylpyrimidine synthase low > 86
Escherichia coli ECRC99 0.74 KEDOAH_19795 apt adenine phosphoribosyltransferase 0.74 KEDOAH_14785 thiC phosphomethylpyrimidine synthase ThiC — —
Escherichia coli ECRC100 0.74 OKFHMN_08170 apt adenine phosphoribosyltransferase 0.74 OKFHMN_13375 thiC phosphomethylpyrimidine synthase ThiC low > 79
Enterobacter asburiae PDN3 0.74 EX28DRAFT_2489 adenine phosphoribosyltransferase (EC 2.4.2.7) 0.74 EX28DRAFT_4536 phosphomethylpyrimidine synthase low > 76
Escherichia coli ECRC101 0.74 MCAODC_27395 apt adenine phosphoribosyltransferase 0.74 MCAODC_03875 thiC phosphomethylpyrimidine synthase ThiC low > 87
Escherichia coli ECRC102 0.74 NIAGMN_06225 apt adenine phosphoribosyltransferase 0.74 NIAGMN_11125 thiC phosphomethylpyrimidine synthase ThiC low > 80
Escherichia coli ECRC98 0.74 JDDGAC_11820 apt adenine phosphoribosyltransferase 0.74 JDDGAC_17000 thiC phosphomethylpyrimidine synthase ThiC low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF4387 Adenine phosphoribosyltransferase (EC 2.4.2.7) 0.75 GFF4198 Thiamin biosynthesis protein ThiC low > 78
Dickeya dianthicola 67-19 0.73 HGI48_RS05825 adenine phosphoribosyltransferase 0.74 HGI48_RS01170 phosphomethylpyrimidine synthase ThiC low > 71
Klebsiella michiganensis M5al 0.73 BWI76_RS06815 adenine phosphoribosyltransferase 0.74 BWI76_RS01555 phosphomethylpyrimidine synthase ThiC low > 92
Pectobacterium carotovorum WPP14 0.73 HER17_RS15710 adenine phosphoribosyltransferase 0.76 HER17_RS20380 phosphomethylpyrimidine synthase ThiC low > 75
Erwinia tracheiphila SCR3 0.71 LU632_RS18140 apt adenine phosphoribosyltransferase 0.75 LU632_RS00970 thiC phosphomethylpyrimidine synthase ThiC low > 73
Erwinia tracheiphila HP pepo 2.2 0.71 IJEDHG_16625 apt adenine phosphoribosyltransferase 0.75 IJEDHG_10885 thiC phosphomethylpyrimidine synthase ThiC low > 61
Pantoea agglomerans CFBP13505 P0401 0.68 PagCFBP13505_RS10715 adenine phosphoribosyltransferase 0.74 PagCFBP13505_RS22620 phosphomethylpyrimidine synthase ThiC low > 74
Pantoea sp. MT58 0.68 IAI47_14480 adenine phosphoribosyltransferase 0.75 IAI47_18085 phosphomethylpyrimidine synthase ThiC low > 76
Erwinia amylovora T8 0.67 OLJFJH_17820 adenine phosphoribosyltransferase 0.75 OLJFJH_06740 phosphomethylpyrimidine synthase ThiC low > 58
Agrobacterium fabrum C58 0.56 Atu2236 adenine phosphoribosyltransferase 0.61 Atu2569 thiamine biosynthesis protein low > 89
Sinorhizobium meliloti 1021 0.56 SMc02698 adenine phosphoribosyltransferase 0.61 SM_b20615 thiamine biosynthesis protein ThiC low > 103
Rhodopseudomonas palustris CGA009 0.55 TX73_023325 adenine phosphoribosyltransferase 0.59 TX73_018540 phosphomethylpyrimidine synthase ThiC low > 86
Bosea sp. OAE506 0.54 ABIE41_RS11210 adenine phosphoribosyltransferase 0.58 ABIE41_RS02770 phosphomethylpyrimidine synthase ThiC low > 77
Phaeobacter inhibens DSM 17395 0.53 PGA1_c06370 adenine phosphoribosyltransferase Apt 0.61 PGA1_c09110 thiamine biosynthesis protein ThiC low > 62
Xanthobacter sp. DMC5 0.53 GFF64 Adenine phosphoribosyltransferase 0.61 GFF257 Phosphomethylpyrimidine synthase — —
Cupriavidus basilensis FW507-4G11 0.53 RR42_RS02125 adenine phosphoribosyltransferase 0.65 RR42_RS01290 thiamine biosynthesis protein ThiC low > 128
Marinobacter adhaerens HP15 0.52 HP15_2549 adenine phosphoribosyltransferase 0.70 HP15_453 thiamine biosynthesis protein thiC low > 73
Hydrogenophaga sp. GW460-11-11-14-LB1 0.52 GFF2440 Adenine phosphoribosyltransferase (EC 2.4.2.7) 0.63 GFF4626 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) low > 90
Castellaniella sp019104865 MT123 0.52 ABCV34_RS14375 adenine phosphoribosyltransferase 0.68 ABCV34_RS10825 phosphomethylpyrimidine synthase ThiC low > 48
Ralstonia solanacearum PSI07 0.51 RPSI07_RS22085 adenine phosphoribosyltransferase 0.65 RPSI07_RS23420 phosphomethylpyrimidine synthase ThiC low > 81
Ralstonia solanacearum GMI1000 0.51 RS_RS02065 adenine phosphoribosyltransferase 0.65 RS_RS00555 phosphomethylpyrimidine synthase low > 80
Ralstonia solanacearum IBSBF1503 0.51 RALBFv3_RS11215 adenine phosphoribosyltransferase 0.65 RALBFv3_RS09940 phosphomethylpyrimidine synthase ThiC low > 76
Ralstonia sp. UNC404CL21Col 0.51 ABZR87_RS07105 adenine phosphoribosyltransferase 0.65 ABZR87_RS04785 phosphomethylpyrimidine synthase ThiC low > 80
Ralstonia solanacearum UW163 0.51 UW163_RS02365 adenine phosphoribosyltransferase 0.65 UW163_RS03640 phosphomethylpyrimidine synthase ThiC — —
Methylophilus sp. DMC18 0.51 GFF2315 Adenine phosphoribosyltransferase 0.69 GFF2191 Phosphomethylpyrimidine synthase low > 43
Burkholderia phytofirmans PsJN 0.51 BPHYT_RS02940 adenine phosphoribosyltransferase 0.67 BPHYT_RS13220 phosphomethylpyrimidine synthase low > 109
Paraburkholderia graminis OAS925 0.51 ABIE53_000725 adenine phosphoribosyltransferase 0.68 ABIE53_002857 phosphomethylpyrimidine synthase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.51 H281DRAFT_01920 adenine phosphoribosyltransferase 0.68 H281DRAFT_00395 hydroxymethylpyrimidine synthase low > 103
Paraburkholderia sabiae LMG 24235 0.50 QEN71_RS01790 adenine phosphoribosyltransferase 0.67 QEN71_RS05480 phosphomethylpyrimidine synthase ThiC 0.55 105
Acidovorax sp. GW101-3H11 0.50 Ac3H11_4267 Adenine phosphoribosyltransferase (EC 2.4.2.7) 0.61 Ac3H11_2027 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) low > 79
Dinoroseobacter shibae DFL-12 0.50 Dshi_2074 adenine phosphoribosyltransferase (RefSeq) 0.61 Dshi_4080 thiamine biosynthesis protein ThiC (RefSeq) — —
Sphingomonas koreensis DSMZ 15582 0.48 Ga0059261_3222 adenine phosphoribosyltransferase (EC 2.4.2.7) 0.59 Ga0059261_2424 hydroxymethylpyrimidine synthase low > 68
Dechlorosoma suillum PS 0.48 Dsui_2706 adenine phosphoribosyltransferase 0.69 Dsui_0422 thiamine biosynthesis protein ThiC — —
Azospirillum sp. SherDot2 0.47 MPMX19_06118 Adenine phosphoribosyltransferase 0.59 MPMX19_00336 Phosphomethylpyrimidine synthase low > 112
Bacteroides stercoris CC31F 0.47 HMPREF1181_RS02100 adenine phosphoribosyltransferase 0.55 HMPREF1181_RS14685 phosphomethylpyrimidine synthase ThiC low > 56
Pseudomonas sp. S08-1 0.46 OH686_02250 adenine phosphoribosyltransferase 0.70 OH686_15885 phosphomethylpyrimidine synthase low > 80
Cellulophaga baltica 18 0.45 M666_RS19415 adenine phosphoribosyltransferase 0.68 M666_RS10600 phosphomethylpyrimidine synthase ThiC low > 67
Phocaeicola dorei CL03T12C01 0.44 ABI39_RS05410 adenine phosphoribosyltransferase 0.55 ABI39_RS17760 phosphomethylpyrimidine synthase ThiC low > 72
Bacteroides ovatus ATCC 8483 0.44 BACOVA_01366 adenine phosphoribosyltransferase 0.55 BACOVA_02358 thiamine biosynthesis protein ThiC low > 96
Pseudomonas aeruginosa MRSN321 0.44 DY961_RS19340 adenine phosphoribosyltransferase 0.71 DY961_RS10660 thiC;go_function=iron-sulfur phosphomethylpyrimidine synthase ThiC low > 100
Pseudomonas aeruginosa PUPa3 0.44 DQ20_RS53470 adenine phosphoribosyltransferase 0.71 DQ20_RS51400 thiC;go_function=iron-sulfur phosphomethylpyrimidine synthase ThiC low > 101
Pseudomonas aeruginosa PA14 0.44 IKLFDK_07370 adenine phosphoribosyltransferase 0.71 IKLFDK_28675 phosphomethylpyrimidine synthase ThiC low > 98
Phocaeicola vulgatus CL09T03C04 0.44 HMPREF1058_RS11530 adenine phosphoribosyltransferase 0.55 HMPREF1058_RS03280 phosphomethylpyrimidine synthase ThiC low > 67
Mucilaginibacter yixingensis YX-36 DSM 26809 0.43 ABZR88_RS01200 adenine phosphoribosyltransferase 0.69 ABZR88_RS08840 phosphomethylpyrimidine synthase ThiC low > 71
Dyella japonica UNC79MFTsu3.2 0.43 ABZR86_RS19335 adenine phosphoribosyltransferase 0.67 ABZR86_RS17230 phosphomethylpyrimidine synthase ThiC low > 74
Rhodanobacter sp. FW510-T8 0.43 OKGIIK_01965 adenine phosphoribosyltransferase 0.67 OKGIIK_16965 thiC phosphomethylpyrimidine synthase ThiC low > 53
Bacteroides thetaiotaomicron VPI-5482 0.43 BT3267 adenine phosphoribosyltransferase (NCBI ptt file) 0.55 BT0650 thiamine biosynthesis protein ThiC (NCBI ptt file) low > 81
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_4072 Adenine phosphoribosyltransferase (EC 2.4.2.7) 0.69 PfGW456L13_187 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_3426 adenine phosphoribosyltransferase 0.69 Psyr_0544 hydroxymethylpyrimidine synthase low > 86
Pseudomonas sp. SVBP6 0.42 COO64_RS18635 adenine phosphoribosyltransferase 0.69 COO64_RS17755 thiC phosphomethylpyrimidine synthase ThiC low > 93
Pseudomonas fluorescens FW300-N2E3 0.42 AO353_00665 adenine phosphoribosyltransferase 0.69 AO353_13010 thiamine biosynthesis protein ThiC 0.21 70
Pseudomonas fluorescens FW300-N1B4 0.42 Pf1N1B4_3866 Adenine phosphoribosyltransferase (EC 2.4.2.7) 0.69 Pf1N1B4_1447 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) low > 87
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_3426 adenine phosphoribosyltransferase 0.69 Psyr_0544 hydroxymethylpyrimidine synthase low > 86
Pseudomonas lactucae CFBP13502 0.41 GEMAOFIL_04303 Adenine phosphoribosyltransferase 0.69 GEMAOFIL_00708 Phosphomethylpyrimidine synthase low > 96
Pseudomonas simiae WCS417 0.41 PS417_20790 adenine phosphoribosyltransferase 0.69 PS417_02355 thiamine biosynthesis protein ThiC low > 88
Pseudomonas stutzeri RCH2 0.41 Psest_2539 adenine phosphoribosyltransferase 0.69 Psest_0477 thiamine biosynthesis protein ThiC low > 67
Pseudomonas fluorescens SBW25 0.41 PFLU_RS22400 adenine phosphoribosyltransferase 0.69 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC low > 109
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS22400 adenine phosphoribosyltransferase 0.69 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC low > 109
Lysobacter sp. OAE881 0.41 ABIE51_RS05465 adenine phosphoribosyltransferase 0.68 ABIE51_RS17515 phosphomethylpyrimidine synthase ThiC low > 62
Pseudomonas sp. RS175 0.41 PFR28_01078 Adenine phosphoribosyltransferase 0.69 PFR28_05091 Phosphomethylpyrimidine synthase low > 88
Pseudomonas sp. DMC3 0.41 GFF710 Adenine phosphoribosyltransferase 0.70 GFF3183 Phosphomethylpyrimidine synthase low > 89
Pseudomonas fluorescens FW300-N2C3 0.41 AO356_02490 adenine phosphoribosyltransferase 0.69 AO356_08810 thiamine biosynthesis protein ThiC low > 104
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_2324 Adenine phosphoribosyltransferase (EC 2.4.2.7) 0.69 Pf6N2E2_3644 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) low > 103
Pseudomonas segetis P6 0.41 MPMX49_02302 Adenine phosphoribosyltransferase 0.68 MPMX49_04184 Phosphomethylpyrimidine synthase low > 75
Rhodospirillum rubrum S1H 0.40 Rru_A0607 Adenine phosphoribosyl transferase (NCBI) 0.56 Rru_A2008 Thiamine biosynthesis protein ThiC (NCBI) low > 58
Azospirillum brasilense Sp245 0.40 AZOBR_RS21480 adenine phosphoribosyltransferase 0.61 AZOBR_RS07940 phosphomethylpyrimidine synthase low > 97
Magnetospirillum magneticum AMB-1 0.40 AMB_RS14345 adenine phosphoribosyltransferase 0.62 AMB_RS01125 phosphomethylpyrimidine synthase — —
Xanthomonas campestris pv. campestris strain 8004 0.40 Xcc-8004.2273.1 Adenine phosphoribosyltransferase (EC 2.4.2.7) 0.66 Xcc-8004.1066.1 hypothetical protein low > 74
Pseudomonas sp. BP01 0.39 JOY50_RS00130 adenine phosphoribosyltransferase 0.69 JOY50_RS10065 thiC phosphomethylpyrimidine synthase ThiC low > 84
Pseudomonas putida KT2440 0.39 PP_4266 Adenine phosphoribosyltransferase 0.70 PP_4922 Phosphomethylpyrimidine synthase low > 96
Rhodanobacter sp000427505 FW510-R12 0.39 LRK53_RS05235 adenine phosphoribosyltransferase 0.58 LRK53_RS03795 phosphomethylpyrimidine synthase ThiC 0.26 35
Sphingobium sp. HT1-2 0.34 GFF3761 Adenine phosphoribosyltransferase (EC 2.4.2.7) 0.59 GFF941 Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) low > 95
Acinetobacter radioresistens SK82 0.28 MPMX26_02330 Adenine phosphoribosyltransferase 0.68 MPMX26_00180 Phosphomethylpyrimidine synthase low > 36

Not shown: 9 genomes with orthologs for CSW01_05360 only; 13 genomes with orthologs for CSW01_00335 only