Conservation of cofitness between CSW01_11220 and CSW01_00015 in Vibrio cholerae E7946 ATCC 55056

83 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_11220 flagellar basal body rod protein FlgC 1.0 CSW01_00015 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.83 14
Shewanella loihica PV-4 0.70 Shew_1346 flgC flagellar basal body rod protein FlgC (RefSeq) 0.73 Shew_3865 trmE tRNA modification GTPase TrmE (RefSeq) — —
Shewanella amazonensis SB2B 0.67 Sama_2317 flgC flagellar basal body rod protein FlgC (RefSeq) 0.75 Sama_0008 trmE tRNA modification GTPase TrmE (RefSeq) — —
Shewanella sp. ANA-3 0.64 Shewana3_1322 flgC flagellar basal body rod protein FlgC (RefSeq) 0.75 Shewana3_0005 trmE tRNA modification GTPase TrmE (RefSeq) low > 73
Shewanella oneidensis MR-1 0.64 SO3249 flgC flagellar basal-body rod protein FlgC (NCBI ptt file) 0.75 SO0003 trmE tRNA modification GTPase TrmE (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.59 MIT1002_01040 Putative proximal rod protein 0.67 MIT1002_04128 tRNA modification GTPase MnmE — —
Rhodanobacter denitrificans FW104-10B01 0.51 LRK54_RS13410 flagellar basal body rod protein FlgC 0.46 LRK54_RS08505 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 59
Rhodanobacter denitrificans MT42 0.51 LRK55_RS13150 flagellar basal body rod protein FlgC 0.46 LRK55_RS08270 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 63
Hydrogenophaga sp. GW460-11-11-14-LB1 0.51 GFF1414 Flagellar basal-body rod protein FlgC 0.52 GFF2437 GTPase and tRNA-U34 5-formylation enzyme TrmE — —
Pseudomonas sp. S08-1 0.51 OH686_02970 flagellar basal-body rod protein FlgC 0.63 OH686_12655 tRNA modification GTPase TrmE — —
Rhodanobacter sp. FW510-T8 0.50 OKGIIK_02655 flgC flagellar basal body rod protein FlgC 0.46 OKGIIK_15285 mnmE tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 52
Pseudomonas fluorescens SBW25-INTG 0.50 PFLU_RS23175 flagellar basal body rod protein FlgC 0.64 PFLU_RS30195 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Pseudomonas fluorescens SBW25 0.50 PFLU_RS23175 flagellar basal body rod protein FlgC 0.64 PFLU_RS30195 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 109
Pseudomonas simiae WCS417 0.50 PS417_21565 flagellar basal body rod protein FlgC 0.64 PS417_28540 tRNA modification GTPase MnmE — —
Pseudomonas syringae pv. syringae B728a 0.49 Psyr_3480 Flagellar basal-body rod protein FlgC 0.64 Psyr_5133 tRNA modification GTPase trmE low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.49 Psyr_3480 Flagellar basal-body rod protein FlgC 0.64 Psyr_5133 tRNA modification GTPase trmE low > 86
Pseudomonas fluorescens FW300-N1B4 0.49 Pf1N1B4_3473 Flagellar basal-body rod protein FlgC 0.64 Pf1N1B4_1933 GTPase and tRNA-U34 5-formylation enzyme TrmE — —
Marinobacter adhaerens HP15 0.49 HP15_1468 flagellar basal-body rod protein FlgC-like protein 0.68 HP15_3698 tRNA modification GTPase TrmE — —
Pseudomonas putida KT2440 0.49 PP_4390 flagellar basal-body rod protein FlgC 0.65 PP_0005 GTPase — —
Acidovorax sp. GW101-3H11 0.49 Ac3H11_1376 Flagellar basal-body rod protein FlgC 0.51 Ac3H11_4264 GTPase and tRNA-U34 5-formylation enzyme TrmE low > 79
Pseudomonas fluorescens FW300-N2E3 0.49 AO353_02855 flagellar basal-body rod protein FlgC 0.64 AO353_10455 tRNA modification GTPase MnmE low > 101
Pseudomonas sp. RS175 0.49 PFR28_03253 Flagellar basal-body rod protein FlgC 0.64 PFR28_04588 tRNA modification GTPase MnmE — —
Pseudomonas fluorescens FW300-N2E2 0.49 Pf6N2E2_5695 Flagellar basal-body rod protein FlgC 0.64 Pf6N2E2_4202 GTPase and tRNA-U34 5-formylation enzyme TrmE — —
Pseudomonas fluorescens FW300-N2C3 0.49 AO356_18920 flagellar basal-body rod protein FlgC 0.64 AO356_11660 tRNA modification GTPase MnmE — —
Pseudomonas fluorescens GW456-L13 0.49 PfGW456L13_2002 Flagellar basal-body rod protein FlgC 0.64 PfGW456L13_670 GTPase and tRNA-U34 5-formylation enzyme TrmE — —
Dyella japonica UNC79MFTsu3.2 0.47 ABZR86_RS20080 flagellar basal body rod protein FlgC 0.46 ABZR86_RS15115 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 74
Pseudomonas stutzeri RCH2 0.46 Psest_2967 flagellar basal-body rod protein FlgC 0.64 Psest_4373 tRNA modification GTPase TrmE — —
Herbaspirillum seropedicae SmR1 0.45 HSERO_RS10185 flagellar basal body rod protein FlgC 0.48 HSERO_RS21670 tRNA modification GTPase TrmE — —
Dechlorosoma suillum PS 0.45 Dsui_1733 flagellar basal-body rod protein FlgC 0.45 Dsui_0837 tRNA modification GTPase TrmE low > 51
Cupriavidus basilensis FW507-4G11 0.44 RR42_RS35720 flagellar basal body rod protein FlgC 0.49 RR42_RS20805 tRNA modification GTPase TrmE — —
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS28915 flagellar basal body rod protein FlgC 0.49 QEN71_RS29655 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Variovorax sp. SCN45 0.42 GFF5716 Flagellar basal-body rod protein FlgC 0.49 GFF3275 tRNA-5-carboxymethylaminomethyl-2-thiouridine(34) synthesis protein MnmE — —
Dickeya dianthicola ME23 0.42 DZA65_RS14005 flagellar basal body rod protein FlgC 0.75 DZA65_RS22695 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 75
Dickeya dadantii 3937 0.42 DDA3937_RS13475 flagellar basal body rod protein FlgC 0.76 DDA3937_RS21310 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 74
Dickeya dianthicola 67-19 0.42 HGI48_RS13520 flagellar basal body rod protein FlgC 0.75 HGI48_RS21710 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 71
Castellaniella sp019104865 MT123 0.42 ABCV34_RS05765 flagellar basal body rod protein FlgC 0.46 ABCV34_RS11895 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Lysobacter sp. OAE881 0.41 ABIE51_RS16675 flagellar basal body rod protein FlgC 0.39 ABIE51_RS00735 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 62
Xanthomonas campestris pv. campestris strain 8004 0.41 Xcc-8004.2779.1 Flagellar basal-body rod protein FlgC 0.41 Xcc-8004.5407.1 GTPase and tRNA-U34 5-formylation enzyme TrmE low > 74
Pectobacterium carotovorum WPP14 0.41 HER17_RS08170 flagellar basal body rod protein FlgC 0.75 HER17_RS21825 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 75
Serratia liquefaciens MT49 0.41 IAI46_15955 flagellar basal body rod protein FlgC 0.75 IAI46_25250 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 86
Escherichia coli ECRC98 0.41 JDDGAC_07330 flgC flagellar basal body rod protein FlgC 0.76 JDDGAC_18605 tRNA modification GTPase MnmE — —
Escherichia coli ECOR38 0.41 HEPCGN_23820 flgC flagellar basal body rod protein FlgC 0.76 HEPCGN_13680 tRNA modification GTPase MnmE low > 85
Escherichia coli ECOR27 0.41 NOLOHH_21200 flgC flagellar basal body rod protein FlgC 0.76 NOLOHH_07125 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.41 OHPLBJKB_02591 Flagellar basal-body rod protein FlgC 0.76 OHPLBJKB_04346 tRNA modification GTPase MnmE — —
Escherichia coli BW25113 0.41 b1074 flgC flagellar basal-body rod protein C (NCBI) 0.76 b3706 trmE tRNA modification GTPase (NCBI) low > 76
Escherichia coli ECRC62 0.41 BNILDI_19360 flgC flagellar basal body rod protein FlgC 0.76 BNILDI_04405 tRNA modification GTPase MnmE — —
Escherichia coli ECRC101 0.41 MCAODC_23030 flgC flagellar basal body rod protein FlgC 0.76 MCAODC_05495 tRNA modification GTPase MnmE — —
Escherichia coli ECRC101 0.41 OKFHMN_03670 flgC flagellar basal body rod protein FlgC 0.76 OKFHMN_14985 tRNA modification GTPase MnmE — —
Escherichia coli ECRC102 0.41 NIAGMN_24160 flgC flagellar basal body rod protein FlgC 0.76 NIAGMN_12740 tRNA modification GTPase MnmE — —
Escherichia coli Nissle 1917 0.41 ECOLIN_RS06220 flagellar basal body rod protein FlgC 0.76 ECOLIN_RS21345 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 52
Escherichia coli ECRC99 0.41 KEDOAH_24085 flgC flagellar basal body rod protein FlgC 0.76 KEDOAH_13165 tRNA modification GTPase MnmE — —
Escherichia coli BL21 0.41 ECD_01070 flagellar component of cell-proximal portion of basal-body rod 0.76 ECD_03590 tRNA U34 5-methylaminomethyl-2-thiouridine modification GTPase — —
Rahnella sp. WP5 0.41 EX31_RS11310 flagellar basal body rod protein FlgC 0.75 EX31_RS06000 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 89
Escherichia fergusonii Becca 0.41 EFB2_02900 Flagellar basal-body rod protein FlgC 0.76 EFB2_04925 tRNA modification GTPase MnmE 0.55 36
Ralstonia solanacearum IBSBF1503 0.40 RALBFv3_RS21735 flagellar basal body rod protein FlgC 0.49 RALBFv3_RS09410 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Enterobacter sp. TBS_079 0.40 MPMX20_01753 Flagellar basal-body rod protein FlgC 0.75 MPMX20_04650 tRNA modification GTPase MnmE low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.40 GFF3355 Flagellar basal-body rod protein FlgC 0.76 GFF1750 GTPase and tRNA-U34 5-formylation enzyme TrmE low > 78
Paraburkholderia bryophila 376MFSha3.1 0.40 H281DRAFT_05763 flagellar basal-body rod protein FlgC 0.49 H281DRAFT_02320 tRNA modification GTPase trmE — —
Ralstonia solanacearum UW163 0.40 UW163_RS17450 flagellar basal body rod protein FlgC 0.49 UW163_RS04170 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Enterobacter asburiae PDN3 0.40 EX28DRAFT_1858 flagellar basal-body rod protein FlgC 0.75 EX28DRAFT_3993 tRNA modification GTPase TrmE — —
Paraburkholderia graminis OAS925 0.40 ABIE53_000101 flagellar basal-body rod protein FlgC 0.50 ABIE53_000332 tRNA modification GTPase — —
Erwinia tracheiphila SCR3 0.39 LU632_RS10400 flgC flagellar basal body rod protein FlgC 0.73 LU632_RS25300 mnmE tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Ralstonia sp. UNC404CL21Col 0.39 ABZR87_RS22285 flagellar basal body rod protein FlgC 0.49 ABZR87_RS05350 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 80
Pantoea sp. MT58 0.39 IAI47_12160 flagellar basal body rod protein FlgC 0.73 IAI47_18830 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 76
Burkholderia phytofirmans PsJN 0.39 BPHYT_RS18890 flagellar basal body rod protein FlgC 0.50 BPHYT_RS19830 tRNA modification GTPase TrmE — —
Ralstonia solanacearum PSI07 0.38 RPSI07_RS01395 flagellar basal body rod protein FlgC 0.49 RPSI07_RS23950 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Ralstonia solanacearum GMI1000 0.38 RS_RS18800 flagellar basal body rod protein FlgC 0.49 RS_RS00020 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Sphingomonas koreensis DSMZ 15582 0.33 Ga0059261_2090 flagellar basal-body rod protein FlgC 0.23 Ga0059261_2204 tRNA modification GTPase trmE low > 68
Desulfovibrio vulgaris Hildenborough JW710 0.29 DVU0315 flgC flagellar basal-body rod protein FlgC (TIGR) 0.22 DVU1079 trmE tRNA modification GTPase TrmE (TIGR) low > 55
Azospirillum sp. SherDot2 0.29 MPMX19_00863 Flagellar basal-body rod protein FlgC 0.26 MPMX19_02568 tRNA modification GTPase MnmE — —
Rhizobium sp. OAE497 0.27 ABIE40_RS02975 flagellar basal body rod protein FlgC 0.28 ABIE40_RS19220 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 107
Magnetospirillum magneticum AMB-1 0.27 AMB_RS03170 flagellar basal body rod protein FlgC 0.27 AMB_RS00005 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Agrobacterium fabrum C58 0.27 Atu0554 flagellar basal-body rod protein 0.28 Atu2832 tRNA modification GTPase low > 89
Bosea sp. OAE506 0.27 ABIE41_RS05520 flagellar basal body rod protein FlgC 0.27 ABIE41_RS04680 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 77
Rhodospirillum rubrum S1H 0.27 Rru_A2825 Flagellar basal-body rod protein FlgC (NCBI) 0.26 Rru_A3624 tRNA modification GTPase TrmE (NCBI) — —
Sinorhizobium meliloti 1021 0.26 SMc03028 flagellar basal body rod protein FlgC 0.28 SMc02797 tRNA modification GTPase TrmE — —
Azospirillum brasilense Sp245 0.26 AZOBR_RS29935 flagellar basal-body rod protein FlgC 0.27 AZOBR_RS01805 tRNA modification GTPase TrmE low > 97
Desulfovibrio vulgaris Miyazaki F 0.26 DvMF_2285 flagellar basal-body rod protein FlgC (RefSeq) 0.27 DvMF_0886 trmE tRNA modification GTPase TrmE (RefSeq) low > 51
Dinoroseobacter shibae DFL-12 0.23 Dshi_3248 flagellar basal-body rod protein FlgC (RefSeq) 0.28 Dshi_3454 tRNA modification GTPase TrmE (RefSeq) — —
Rhodopseudomonas palustris CGA009 0.22 TX73_020155 flagellar basal body rod protein FlgC 0.30 TX73_001535 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 86
Phaeobacter inhibens DSM 17395 0.21 PGA1_c35820 flagellar basal-body rod protein FlgC 0.26 PGA1_c35110 tRNA modification GTPase MnmE — —
Brevundimonas sp. GW460-12-10-14-LB2 0.21 A4249_RS16025 flagellar basal body rod protein FlgC 0.27 A4249_RS13700 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 48
Caulobacter crescentus NA1000 Δfur 0.21 CCNA_01005 flagellar basal-body rod protein flgC 0.28 CCNA_03872 tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase low > 67
Caulobacter crescentus NA1000 0.21 CCNA_01005 flagellar basal-body rod protein flgC 0.28 CCNA_03872 tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase low > 66

Not shown: 0 genomes with orthologs for CSW01_11220 only; 16 genomes with orthologs for CSW01_00015 only