Conservation of cofitness between BWI76_RS06520 and BWI76_RS08040 in Klebsiella michiganensis M5al

87 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Klebsiella michiganensis M5al 1.0 BWI76_RS06520 trigger factor 1.0 BWI76_RS08040 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.42 16
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF4352 Cell division trigger factor (EC 5.2.1.8) 0.96 GFF4549 LSU m3Psi1915 methyltransferase RlmH low > 78
Escherichia coli Nissle 1917 0.96 ECOLIN_RS02620 trigger factor 0.95 ECOLIN_RS03465 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH — —
Escherichia coli ECRC99 0.96 KEDOAH_19625 tig trigger factor 0.95 KEDOAH_20610 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH — —
Escherichia coli ECRC101 0.96 MCAODC_27565 tig trigger factor 0.95 MCAODC_26575 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 87
Escherichia coli ECOR27 0.96 NOLOHH_01275 tig trigger factor 0.95 NOLOHH_23735 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 75
Escherichia coli ECRC100 0.96 OKFHMN_08340 tig trigger factor 0.95 OKFHMN_07360 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 80
Escherichia coli BW25113 0.96 b0436 tig trigger factor (NCBI) 0.95 b0636 ybeA hypothetical protein (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.96 OHPLBJKB_03237 Trigger factor 0.95 OHPLBJKB_03070 Ribosomal RNA large subunit methyltransferase H — —
Escherichia coli ECOR38 0.96 HEPCGN_06955 tig trigger factor 0.95 HEPCGN_00915 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 87
Escherichia coli BL21 0.96 ECD_00387 peptidyl-prolyl cis/trans isomerase (trigger factor) 0.95 ECD_00605 23S rRNA m(3)Psi1915 pseudouridine methyltransferase, SAM-dependent — —
Escherichia coli ECRC102 0.96 NIAGMN_06395 tig trigger factor 0.95 NIAGMN_05415 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH — —
Escherichia coli ECRC98 0.96 JDDGAC_11995 tig trigger factor 0.95 JDDGAC_11005 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH — —
Escherichia fergusonii Becca 0.96 EFB2_03621 Trigger factor 0.95 EFB2_03456 Ribosomal RNA large subunit methyltransferase H low > 86
Escherichia coli ECRC62 0.96 BNILDI_22690 tig trigger factor 0.95 BNILDI_21745 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH — —
Enterobacter sp. TBS_079 0.95 MPMX20_01027 Trigger factor 0.97 MPMX20_01295 Ribosomal RNA large subunit methyltransferase H low > 85
Enterobacter asburiae PDN3 0.95 EX28DRAFT_2535 trigger factor 0.97 EX28DRAFT_2327 rRNA large subunit m3Psi methyltransferase RlmH — —
Serratia liquefaciens MT49 0.88 IAI46_05005 trigger factor 0.91 IAI46_05935 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 86
Pantoea sp. MT58 0.88 IAI47_14660 trigger factor 0.91 IAI47_14020 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 76
Rahnella sp. WP5 0.88 EX31_RS22240 trigger factor 0.91 EX31_RS23125 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 89
Erwinia tracheiphila SCR3 0.87 LU632_RS18350 tig trigger factor 0.89 LU632_RS16370 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 74
Dickeya dadantii 3937 0.86 DDA3937_RS05635 trigger factor 0.91 DDA3937_RS06175 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH — —
Pectobacterium carotovorum WPP14 0.86 HER17_RS15855 trigger factor 0.91 HER17_RS15240 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 75
Dickeya dianthicola 67-19 0.85 HGI48_RS05680 trigger factor 0.90 HGI48_RS06220 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH — —
Dickeya dianthicola ME23 0.85 DZA65_RS06005 trigger factor 0.91 DZA65_RS06565 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 75
Vibrio cholerae E7946 ATCC 55056 0.70 CSW01_09620 trigger factor 0.81 CSW01_04865 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 62
Shewanella amazonensis SB2B 0.65 Sama_1223 tig trigger factor (RefSeq) 0.79 Sama_2587 rRNA large subunit methyltransferase (RefSeq) low > 62
Shewanella loihica PV-4 0.63 Shew_2509 tig trigger factor (RefSeq) 0.80 Shew_2934 SPOUT methyltransferase superfamily protein (RefSeq) low > 60
Shewanella sp. ANA-3 0.62 Shewana3_2662 tig trigger factor (RefSeq) 0.78 Shewana3_0996 rRNA large subunit methyltransferase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.62 SO1793 tig trigger factor (NCBI ptt file) 0.78 SO1169 conserved hypothetical protein TIGR00246 (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.59 MIT1002_02761 Trigger factor 0.78 MIT1002_01852 Ribosomal RNA large subunit methyltransferase H — —
Pseudomonas stutzeri RCH2 0.51 Psest_2288 trigger factor 0.60 Psest_0511 rRNA large subunit m3Psi methyltransferase RlmH low > 67
Pseudomonas fluorescens FW300-N2E2 0.51 Pf6N2E2_2219 Cell division trigger factor (EC 5.2.1.8) 0.61 Pf6N2E2_4996 LSU m3Psi1915 methyltransferase RlmH low > 103
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_01755 trigger factor 0.61 AO356_15305 50S rRNA methyltransferase low > 104
Pseudomonas simiae WCS417 0.50 PS417_17240 trigger factor 0.62 PS417_24730 50S rRNA methyltransferase — —
Pseudomonas sp. S08-1 0.50 OH686_03650 trigger factor 0.62 OH686_09325 rRNA large subunit m3Psi methyltransferase RlmH low > 80
Pseudomonas putida KT2440 0.50 PP_2299 Trigger factor 0.61 PP_4808 23S rRNA m3psi1915 methyltransferase low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.50 Psyr_1746 Trigger factor 0.61 Psyr_4366 Protein of unknown function DUF163 low > 86
Pseudomonas syringae pv. syringae B728a 0.50 Psyr_1746 Trigger factor 0.61 Psyr_4366 Protein of unknown function DUF163 — —
Pseudomonas fluorescens GW456-L13 0.50 PfGW456L13_2551 Cell division trigger factor (EC 5.2.1.8) 0.61 PfGW456L13_1359 LSU m3Psi1915 methyltransferase RlmH low > 87
Pseudomonas fluorescens FW300-N2E3 0.50 AO353_20170 trigger factor 0.61 AO353_06480 50S rRNA methyltransferase low > 101
Pseudomonas fluorescens SBW25-INTG 0.50 PFLU_RS19175 trigger factor 0.62 PFLU_RS26660 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 109
Pseudomonas fluorescens SBW25 0.50 PFLU_RS19175 trigger factor 0.62 PFLU_RS26660 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 109
Pseudomonas fluorescens FW300-N1B4 0.50 Pf1N1B4_3944 Cell division trigger factor (EC 5.2.1.8) 0.61 Pf1N1B4_2691 LSU m3Psi1915 methyltransferase RlmH — —
Pseudomonas sp. RS175 0.49 PFR28_01227 Trigger factor 0.62 PFR28_03869 Ribosomal RNA large subunit methyltransferase H low > 88
Marinobacter adhaerens HP15 0.48 HP15_2186 trigger factor 0.66 HP15_604 conserved hypothetical protein CHP00246 low > 73
Kangiella aquimarina DSM 16071 0.46 B158DRAFT_1033 trigger factor 0.62 B158DRAFT_0085 rRNA large subunit m3Psi methyltransferase RlmH low > 40
Acinetobacter radioresistens SK82 0.44 MPMX26_00407 Trigger factor 0.46 MPMX26_02301 Ribosomal RNA large subunit methyltransferase H low > 36
Acidovorax sp. GW101-3H11 0.39 Ac3H11_934 Cell division trigger factor (EC 5.2.1.8) 0.41 Ac3H11_2418 LSU m3Psi1915 methyltransferase RlmH low > 79
Herbaspirillum seropedicae SmR1 0.39 HSERO_RS12920 trigger factor 0.47 HSERO_RS17780 50S rRNA methyltransferase low > 78
Paraburkholderia sabiae LMG 24235 0.39 QEN71_RS21990 trigger factor 0.52 QEN71_RS24420 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 153
Hydrogenophaga sp. GW460-11-11-14-LB1 0.39 GFF4040 Cell division trigger factor (EC 5.2.1.8) 0.42 GFF4529 LSU m3Psi1915 methyltransferase RlmH low > 90
Burkholderia phytofirmans PsJN 0.39 BPHYT_RS09445 trigger factor 0.51 BPHYT_RS06385 ribosomal RNA large subunit methyltransferase H low > 109
Variovorax sp. OAS795 0.38 ABID97_RS17605 trigger factor 0.45 ABID97_RS16715 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 91
Paraburkholderia bryophila 376MFSha3.1 0.38 H281DRAFT_00895 trigger factor 0.50 H281DRAFT_04517 23S rRNA (pseudouridine1915-N3)-methyltransferase low > 103
Variovorax sp. SCN45 0.38 GFF490 Cell division trigger factor (EC 5.2.1.8) 0.45 GFF298 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase (EC 2.1.1.177) low > 127
Cupriavidus basilensis FW507-4G11 0.37 RR42_RS09015 trigger factor 0.48 RR42_RS04710 50S rRNA methyltransferase low > 128
Paraburkholderia graminis OAS925 0.36 ABIE53_002114 trigger factor 0.51 ABIE53_001541 23S rRNA (pseudouridine1915-N3)-methyltransferase — —
Ralstonia solanacearum PSI07 0.36 RPSI07_RS16120 trigger factor 0.46 RPSI07_RS13660 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 81
Dechlorosoma suillum PS 0.36 Dsui_2195 trigger factor 0.44 Dsui_0451 hypothetical protein low > 51
Ralstonia solanacearum GMI1000 0.35 RS_RS08640 trigger factor 0.46 RS_RS11015 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH — —
Castellaniella sp019104865 MT123 0.35 ABCV34_RS05140 trigger factor 0.45 ABCV34_RS02530 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH — —
Ralstonia sp. UNC404CL21Col 0.35 ABZR87_RS12800 trigger factor 0.46 ABZR87_RS15430 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 80
Ralstonia solanacearum IBSBF1503 0.35 RALBFv3_RS01355 trigger factor 0.45 RALBFv3_RS03565 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH — —
Ralstonia solanacearum UW163 0.35 UW163_RS14665 trigger factor 0.45 UW163_RS10105 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH — —
Dyella japonica UNC79MFTsu3.2 0.31 ABZR86_RS07335 trigger factor 0.49 ABZR86_RS09055 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 74
Lysobacter sp. OAE881 0.30 ABIE51_RS14160 trigger factor 0.50 ABIE51_RS06755 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 62
Rhodanobacter denitrificans MT42 0.30 LRK55_RS16445 trigger factor 0.49 LRK55_RS02450 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 63
Rhodanobacter denitrificans FW104-10B01 0.30 LRK54_RS16720 trigger factor 0.49 LRK54_RS02695 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 59
Rhodanobacter sp. FW510-T8 0.29 OKGIIK_08045 tig trigger factor 0.49 OKGIIK_09750 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 52
Xanthomonas campestris pv. campestris strain 8004 0.28 Xcc-8004.4049.1 Cell division trigger factor (EC 5.2.1.8) 0.46 Xcc-8004.1876.1 LSU m3Psi1915 methyltransferase RlmH — —
Azospirillum sp. SherDot2 0.27 MPMX19_01549 Trigger factor 0.26 MPMX19_01940 Ribosomal RNA large subunit methyltransferase H — —
Azospirillum brasilense Sp245 0.26 AZOBR_RS07130 trigger factor 0.26 AZOBR_RS04060 50S rRNA methyltransferase low > 97
Brevundimonas sp. GW460-12-10-14-LB2 0.25 A4249_RS06500 trigger factor 0.23 A4249_RS14825 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH — —
Rhodospirillum rubrum S1H 0.25 Rru_A1549 Trigger factor (NCBI) 0.24 Rru_A1235 Protein of unknown function DUF163 (NCBI) low > 58
Sinorhizobium meliloti 1021 0.24 SMc02050 trigger factor 0.30 SMc03781 rRNA large subunit methyltransferase low > 103
Magnetospirillum magneticum AMB-1 0.24 AMB_RS14050 trigger factor 0.25 AMB_RS20655 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH — —
Dinoroseobacter shibae DFL-12 0.24 Dshi_2190 trigger factor (RefSeq) 0.27 Dshi_0088 protein of unknown function DUF163 (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.23 PGA1_c18160 trigger factor Tig 0.28 PGA1_c29750 putative ribosomal RNA large subunit methyltransferase low > 62
Agrobacterium fabrum C58 0.23 Atu1664 trigger factor 0.24 Atu2776 hypothetical protein — —
Rhizobium sp. OAE497 0.23 ABIE40_RS08600 trigger factor 0.28 ABIE40_RS18965 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 107
Bosea sp. OAE506 0.22 ABIE41_RS18065 trigger factor 0.21 ABIE41_RS07565 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 77
Fusobacterium nucleatum SB010 0.18 HUW76_01050 trigger factor 0.26 HUW76_07715 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 35
Desulfovibrio vulgaris Hildenborough JW710 0.16 DVU1334 tig trigger factor (TIGR) 0.20 DVU1254 conserved hypothetical protein (TIGR) — —
Desulfovibrio vulgaris Miyazaki F 0.15 DvMF_0109 trigger factor (RefSeq) 0.20 DvMF_0845 protein of unknown function DUF163 (RefSeq) — —
Parabacteroides merdae CL09T00C40 0.07 HMPREF1078_RS17055 trigger factor 0.30 HMPREF1078_RS16715 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 61
Phocaeicola dorei CL03T12C01 0.07 ABI39_RS02335 trigger factor 0.29 ABI39_RS11895 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 72
Phocaeicola vulgatus CL09T03C04 0.07 HMPREF1058_RS03090 trigger factor 0.30 HMPREF1058_RS15935 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 67

Not shown: 5 genomes with orthologs for BWI76_RS06520 only; 8 genomes with orthologs for BWI76_RS08040 only