| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Burkholderia phytofirmans PsJN | 1.0 | BPHYT_RS16245 | | phosphoribosylaminoimidazole carboxylase | 1.0 | BPHYT_RS17885 | | 3-dehydroquinate synthase | 0.77 | 17 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.95 | H281DRAFT_04185 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.96 | H281DRAFT_05615 | | 3-dehydroquinate synthase | — | — |
| Paraburkholderia graminis OAS925 | 0.92 | ABIE53_003423 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.96 | ABIE53_003740 | | 3-dehydroquinate synthase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.85 | QEN71_RS02450 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.89 | QEN71_RS28035 | | 3-dehydroquinate synthase | 0.69 | 1 |
| Cupriavidus basilensis FW507-4G11 | 0.53 | RR42_RS03230 | | phosphoribosylaminoimidazole carboxylase | 0.75 | RR42_RS19005 | | 3-dehydroquinate synthase | — | — |
| Variovorax sp. SCN45 | 0.49 | GFF5513 | | N5-carboxyaminoimidazole ribonucleotide synthase (EC 6.3.4.18) | 0.61 | GFF5325 | | 3-dehydroquinate synthase (EC 4.2.3.4) | low | > 127 |
| Ralstonia sp. UNC404CL21Col | 0.49 | ABZR87_RS08090 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.71 | ABZR87_RS02590 | | 3-dehydroquinate synthase | — | — |
| Ralstonia solanacearum GMI1000 | 0.49 | RS_RS02885 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.71 | RS_RS14880 | | 3-dehydroquinate synthase | — | — |
| Ralstonia solanacearum PSI07 | 0.49 | RPSI07_RS21130 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.71 | RPSI07_RS10300 | | 3-dehydroquinate synthase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.49 | RALBFv3_RS12200 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.72 | RALBFv3_RS06935 | | 3-dehydroquinate synthase | — | — |
| Ralstonia solanacearum UW163 | 0.49 | UW163_RS01410 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.72 | UW163_RS06680 | | 3-dehydroquinate synthase | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.48 | GFF2770 | | Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) | 0.60 | GFF1331 | | 3-dehydroquinate synthase (EC 4.2.3.4) | — | — |
| Castellaniella sp019104865 MT123 | 0.48 | ABCV34_RS00565 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.58 | ABCV34_RS12705 | | 3-dehydroquinate synthase | — | — |
| Variovorax sp. OAS795 | 0.48 | ABID97_RS01700 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.63 | ABID97_RS23255 | | 3-dehydroquinate synthase | — | — |
| Acidovorax sp. GW101-3H11 | 0.44 | Ac3H11_675 | | Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) | 0.56 | Ac3H11_4705 | | 3-dehydroquinate synthase (EC 4.2.3.4) | — | — |
| Dechlorosoma suillum PS | 0.42 | Dsui_0091 | | phosphoribosylaminoimidazole carboxylase, PurK protein | 0.57 | Dsui_1095 | | 3-dehydroquinate synthase | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.36 | CCNA_03392 | | phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit | 0.40 | CCNA_03104 | | 3-dehydroquinate synthase | low | > 67 |
| Caulobacter crescentus NA1000 | 0.36 | CCNA_03392 | | phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit | 0.40 | CCNA_03104 | | 3-dehydroquinate synthase | 0.80 | 48 |
| Rhizobium sp. OAE497 | 0.35 | ABIE40_RS16070 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.38 | ABIE40_RS17670 | | 3-dehydroquinate synthase | — | — |
| Sinorhizobium meliloti 1021 | 0.35 | SMc04002 | | phosphoribosylaminoimidazole carboxylase ATPase subunit | 0.38 | SMc00696 | | 3-dehydroquinate synthase | — | — |
| Azospirillum sp. SherDot2 | 0.34 | MPMX19_01418 | | N5-carboxyaminoimidazole ribonucleotide synthase | 0.39 | MPMX19_02639 | | 3-dehydroquinate synthase | — | — |
| Azospirillum brasilense Sp245 | 0.34 | AZOBR_RS06140 | | phosphoribosylaminoimidazole carboxylase | 0.38 | AZOBR_RS03220 | | 3-dehydroquinate synthase | — | — |
| Agrobacterium fabrum C58 | 0.33 | Atu3755 | | phosphoribosylaminoimidazole carboxylase ATPase subunit | 0.36 | Atu3625 | | 3-dehydroquinate synthase | — | — |
| Rhodospirillum rubrum S1H | 0.33 | Rru_A1051 | | Phosphoribosylaminoimidazole carboxylase, ATPase subunit (NCBI) | 0.43 | Rru_A3741 | | 3-dehydroquinate synthase (NCBI) | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.32 | A4249_RS08935 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.38 | A4249_RS04175 | | 3-dehydroquinate synthase | — | — |
| Magnetospirillum magneticum AMB-1 | 0.32 | AMB_RS11140 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.40 | AMB_RS19865 | | 3-dehydroquinate synthase | — | — |
| Dinoroseobacter shibae DFL-12 | 0.31 | Dshi_0680 | | phosphoribosylaminoimidazole carboxylase, ATPase subunit (RefSeq) | 0.36 | Dshi_1608 | | 3-dehydroquinate synthase (RefSeq) | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.29 | Ga0059261_1428 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.35 | Ga0059261_3591 | | 3-dehydroquinate synthase (EC 4.2.3.4) | — | — |
| Pseudomonas stutzeri RCH2 | 0.29 | Psest_4068 | | phosphoribosylaminoimidazole carboxylase, PurK protein | 0.54 | Psest_3713 | | 3-dehydroquinate synthase | — | — |
| Acinetobacter radioresistens SK82 | 0.29 | MPMX26_03050 | | N5-carboxyaminoimidazole ribonucleotide synthase | 0.55 | MPMX26_02810 | | 3-dehydroquinate synthase | — | — |
| Phaeobacter inhibens DSM 17395 | 0.29 | PGA1_c24870 | | phosphoribosylaminoimidazole carboxylase ATPase subunit PurK | 0.37 | PGA1_c14100 | | 3-dehydroquinate synthase AroB | — | — |
| Pseudomonas sp. RS175 | 0.29 | PFR28_04495 | | N5-carboxyaminoimidazole ribonucleotide synthase | 0.54 | PFR28_05013 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.29 | Pf6N2E2_4081 | | Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) | 0.56 | Pf6N2E2_3754 | | 3-dehydroquinate synthase (EC 4.2.3.4) | — | — |
| Pseudomonas putida KT2440 | 0.28 | PP_5335 | | N5-carboxyaminoimidazole ribonucleotide synthase | 0.58 | PP_5078 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas sp. S08-1 | 0.28 | OH686_13380 | | N5-carboxyaminoimidazole ribonucleotide synthase | 0.57 | OH686_10015 | | 3-dehydroquinate synthase | — | — |
| Rhodopseudomonas palustris CGA009 | 0.28 | TX73_021645 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.37 | TX73_002610 | | 3-dehydroquinate synthase | — | — |
| Mycobacterium tuberculosis H37Rv | 0.28 | Rv3276c | | Probable phosphoribosylaminoimidazole carboxylase ATPase subunit PurK (air carboxylase) (AIRC) | 0.30 | Rv2538c | | 3-dehydroquinate synthase AroB | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.28 | Pf1N1B4_2028 | | Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) | 0.56 | Pf1N1B4_1537 | | 3-dehydroquinate synthase (EC 4.2.3.4) | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.28 | PFLU_RS29800 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.57 | PFLU_RS02030 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas fluorescens SBW25 | 0.28 | PFLU_RS29800 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.57 | PFLU_RS02030 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.28 | AO356_11075 | | phosphoribosylaminoimidazole carboxylase | 0.56 | AO356_09385 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.27 | PfGW456L13_747 | | Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) | 0.56 | PfGW456L13_275 | | 3-dehydroquinate synthase (EC 4.2.3.4) | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.27 | Psyr_5047 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.54 | Psyr_0409 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.27 | AO353_09935 | | phosphoribosylaminoimidazole carboxylase | 0.55 | AO353_12505 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.27 | Psyr_5047 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.54 | Psyr_0409 | | 3-dehydroquinate synthase | — | — |
| Rhodanobacter sp. FW510-T8 | 0.27 | OKGIIK_03050 | purK | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.41 | OKGIIK_11185 | aroB | 3-dehydroquinate synthase | — | — |
| Pseudomonas simiae WCS417 | 0.27 | PS417_28115 | | phosphoribosylaminoimidazole carboxylase | 0.57 | PS417_01985 | | 3-dehydroquinate synthase | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.27 | ABZR86_RS09830 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.39 | ABZR86_RS10480 | | 3-dehydroquinate synthase | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.27 | Xcc-8004.2012.1 | | Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) | 0.38 | Xcc-8004.1615.1 | | 3-dehydroquinate synthase (EC 4.2.3.4) | 0.66 | 52 |
| Lysobacter sp. OAE881 | 0.27 | ABIE51_RS15390 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.42 | ABIE51_RS16100 | | 3-dehydroquinate synthase | — | — |
| Rhodanobacter denitrificans MT42 | 0.26 | LRK55_RS13530 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.41 | LRK55_RS04085 | | 3-dehydroquinate synthase | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.26 | LRK54_RS13815 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.41 | LRK54_RS04310 | | 3-dehydroquinate synthase | — | — |
| Marinobacter adhaerens HP15 | 0.26 | HP15_2350 | | phosphoribosylaminoimidazole carboxylase ATPase subunit | 0.55 | HP15_480 | | 3-dehydroquinate synthase | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.25 | Echvi_0884 | | phosphoribosylaminoimidazole carboxylase, PurK protein | 0.23 | Echvi_0121 | | 3-dehydroquinate synthase | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.25 | CA264_12600 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.24 | CA264_13105 | | 3-dehydroquinate synthase | — | — |
| Alteromonas macleodii MIT1002 | 0.25 | MIT1002_00522 | | N5-carboxyaminoimidazole ribonucleotide synthase | 0.53 | MIT1002_00447 | | 3-dehydroquinate synthase | — | — |
| Synechococcus elongatus PCC 7942 | 0.24 | Synpcc7942_1428 | purK | phosphoribosylaminoimidazole carboxylase ATPase subunit | 0.40 | Synpcc7942_0525 | aroB | 3-dehydroquinate synthase | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.23 | CSW01_00260 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.50 | CSW01_13300 | | 3-dehydroquinate synthase | low | > 62 |
| Kangiella aquimarina DSM 16071 | 0.23 | B158DRAFT_0610 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.44 | B158DRAFT_0764 | | 3-dehydroquinate synthase (EC 4.2.3.4) | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.21 | ABZR88_RS09290 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.27 | ABZR88_RS05215 | | 3-dehydroquinate synthase | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.21 | GFF4438 | | Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) | 0.48 | GFF630 | | 3-dehydroquinate synthase (EC 4.2.3.4) | low | > 78 |
| Shewanella loihica PV-4 | 0.21 | Shew_1249 | | phosphoribosylaminoimidazole carboxylase, ATPase subunit (RefSeq) | 0.51 | Shew_0214 | | 3-dehydroquinate synthase (RefSeq) | low | > 60 |
| Klebsiella michiganensis M5al | 0.20 | BWI76_RS07065 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.49 | BWI76_RS26085 | | 3-dehydroquinate synthase | 0.56 | 83 |
| Rahnella sp. WP5 | 0.20 | EX31_RS22620 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.51 | EX31_RS04720 | | 3-dehydroquinate synthase | — | — |
| Serratia liquefaciens MT49 | 0.20 | IAI46_05370 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.49 | IAI46_23700 | | 3-dehydroquinate synthase | 0.67 | 51 |
| Enterobacter asburiae PDN3 | 0.19 | EX28DRAFT_2460 | | phosphoribosylaminoimidazole carboxylase, PurK protein | 0.48 | EX28DRAFT_4153 | | 3-dehydroquinate synthase (EC 4.2.3.4) | — | — |
| Pantoea sp. MT58 | 0.19 | IAI47_14355 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.50 | IAI47_01895 | | 3-dehydroquinate synthase | — | — |
| Escherichia coli BW25113 | 0.19 | b0522 | purK | phosphoribosylaminoimidazole carboxylase (NCBI) | 0.50 | b3389 | aroB | 3-dehydroquinate synthase (NCBI) | 0.82 | 21 |
| Escherichia coli ECOR38 | 0.19 | HEPCGN_06480 | purK | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.50 | HEPCGN_15935 | aroB | 3-dehydroquinate synthase | low | > 87 |
| Enterobacter sp. TBS_079 | 0.19 | MPMX20_01097 | | N5-carboxyaminoimidazole ribonucleotide synthase | 0.49 | MPMX20_04278 | | 3-dehydroquinate synthase | 0.75 | 55 |
| Escherichia coli Nissle 1917 | 0.19 | ECOLIN_RS03025 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.50 | ECOLIN_RS19360 | | 3-dehydroquinate synthase | low | > 55 |
| Escherichia coli BL21 | 0.19 | ECD_00472 | | N5-carboxyaminoimidazole ribonucleotide synthase | 0.51 | ECD_03241 | | 3-dehydroquinate synthase | low | > 61 |
| Escherichia fergusonii Becca | 0.19 | EFB2_03540 | | N5-carboxyaminoimidazole ribonucleotide synthase | 0.50 | EFB2_00439 | | 3-dehydroquinate synthase | low | > 86 |
| Escherichia coli ECOR27 | 0.19 | NOLOHH_00830 | purK | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.51 | NOLOHH_08905 | aroB | 3-dehydroquinate synthase | 0.72 | 74 |
| Escherichia coli ECRC101 | 0.19 | MCAODC_27060 | purK | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.50 | MCAODC_07645 | aroB | 3-dehydroquinate synthase | low | > 87 |
| Escherichia coli ECRC100 | 0.19 | OKFHMN_07840 | purK | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.50 | OKFHMN_17115 | aroB | 3-dehydroquinate synthase | low | > 80 |
| Escherichia coli ECRC102 | 0.19 | NIAGMN_05895 | purK | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.50 | NIAGMN_14885 | aroB | 3-dehydroquinate synthase | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.19 | OHPLBJKB_03159 | | N5-carboxyaminoimidazole ribonucleotide synthase | 0.51 | OHPLBJKB_00314 | | 3-dehydroquinate synthase | low | > 73 |
| Escherichia coli ECRC99 | 0.19 | KEDOAH_20130 | purK | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.50 | KEDOAH_11025 | aroB | 3-dehydroquinate synthase | — | — |
| Escherichia coli ECRC62 | 0.19 | BNILDI_22260 | purK | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.51 | BNILDI_02615 | aroB | 3-dehydroquinate synthase | low | > 75 |
| Escherichia coli ECRC98 | 0.19 | JDDGAC_11490 | purK | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.50 | JDDGAC_20745 | aroB | 3-dehydroquinate synthase | low | > 86 |
| Dickeya dianthicola ME23 | 0.18 | DZA65_RS15995 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.48 | DZA65_RS20760 | | 3-dehydroquinate synthase | — | — |
| Dickeya dianthicola 67-19 | 0.18 | HGI48_RS15190 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.48 | HGI48_RS19675 | | 3-dehydroquinate synthase | — | — |
| Dickeya dadantii 3937 | 0.18 | DDA3937_RS15110 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.49 | DDA3937_RS19545 | | 3-dehydroquinate synthase | — | — |
| Pectobacterium carotovorum WPP14 | 0.18 | HER17_RS06470 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.48 | HER17_RS01780 | | 3-dehydroquinate synthase | low | > 75 |
| Erwinia tracheiphila SCR3 | 0.18 | LU632_RS15250 | purK | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.48 | LU632_RS22865 | aroB | 3-dehydroquinate synthase | 0.59 | 57 |
| Shewanella amazonensis SB2B | 0.17 | Sama_1063 | | phosphoribosylaminoimidazole carboxylase ATPase subunit (RefSeq) | 0.55 | Sama_3367 | | 3-dehydroquinate synthase (RefSeq) | low | > 62 |
| Shewanella sp. ANA-3 | 0.16 | Shewana3_3156 | | phosphoribosylaminoimidazole carboxylase ATPase subunit (RefSeq) | 0.52 | Shewana3_3893 | aroB | 3-dehydroquinate synthase (RefSeq) | 0.86 | 41 |
| Shewanella oneidensis MR-1 | 0.15 | SO3555 | purK | phosphoribosylaminoimidazole carboxylase, ATPase subunit (NCBI ptt file) | 0.53 | SO0287 | aroB | 3-dehydroquinate synthase (NCBI ptt file) | 0.81 | 74 |
Not shown: 4 genomes with orthologs for BPHYT_RS16245 only; 2 genomes with orthologs for BPHYT_RS17885 only