Conservation of cofitness between BPHYT_RS06610 and BPHYT_RS17885 in Burkholderia phytofirmans PsJN

89 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS06610 triosephosphate isomerase 1.0 BPHYT_RS17885 3-dehydroquinate synthase 0.78 11
Paraburkholderia graminis OAS925 0.88 ABIE53_001588 triosephosphate isomerase 0.96 ABIE53_003740 3-dehydroquinate synthase — —
Paraburkholderia bryophila 376MFSha3.1 0.87 H281DRAFT_04564 triosephosphate isomerase 0.96 H281DRAFT_05615 3-dehydroquinate synthase — —
Paraburkholderia sabiae LMG 24235 0.80 QEN71_RS24165 triose-phosphate isomerase 0.89 QEN71_RS28035 3-dehydroquinate synthase low > 153
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS05495 triosephosphate isomerase 0.75 RR42_RS19005 3-dehydroquinate synthase — —
Ralstonia sp. UNC404CL21Col 0.60 ABZR87_RS14895 triose-phosphate isomerase 0.71 ABZR87_RS02590 3-dehydroquinate synthase — —
Ralstonia solanacearum GMI1000 0.59 RS_RS10360 triose-phosphate isomerase 0.71 RS_RS14880 3-dehydroquinate synthase — —
Ralstonia solanacearum PSI07 0.59 RPSI07_RS14320 triose-phosphate isomerase 0.71 RPSI07_RS10300 3-dehydroquinate synthase — —
Ralstonia solanacearum UW163 0.59 UW163_RS10735 triose-phosphate isomerase 0.72 UW163_RS06680 3-dehydroquinate synthase — —
Ralstonia solanacearum IBSBF1503 0.59 RALBFv3_RS02990 triose-phosphate isomerase 0.72 RALBFv3_RS06935 3-dehydroquinate synthase — —
Acidovorax sp. GW101-3H11 0.51 Ac3H11_1454 Triosephosphate isomerase (EC 5.3.1.1) 0.56 Ac3H11_4705 3-dehydroquinate synthase (EC 4.2.3.4) — —
Castellaniella sp019104865 MT123 0.51 ABCV34_RS01320 triose-phosphate isomerase 0.58 ABCV34_RS12705 3-dehydroquinate synthase — —
Xanthomonas campestris pv. campestris strain 8004 0.49 Xcc-8004.1979.1 Triosephosphate isomerase (EC 5.3.1.1) 0.38 Xcc-8004.1615.1 3-dehydroquinate synthase (EC 4.2.3.4) — —
Variovorax sp. SCN45 0.49 GFF4748 Triosephosphate isomerase (EC 5.3.1.1) 0.61 GFF5325 3-dehydroquinate synthase (EC 4.2.3.4) low > 127
Dechlorosoma suillum PS 0.49 Dsui_3052 triosephosphate isomerase 0.57 Dsui_1095 3-dehydroquinate synthase — —
Kangiella aquimarina DSM 16071 0.48 B158DRAFT_0649 triosephosphate isomerase (EC 5.3.1.1) 0.44 B158DRAFT_0764 3-dehydroquinate synthase (EC 4.2.3.4) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.48 GFF3679 Triosephosphate isomerase (EC 5.3.1.1) 0.60 GFF1331 3-dehydroquinate synthase (EC 4.2.3.4) — —
Rhodanobacter sp. FW510-T8 0.46 OKGIIK_07435 tpiA triose-phosphate isomerase 0.41 OKGIIK_11185 aroB 3-dehydroquinate synthase — —
Dyella japonica UNC79MFTsu3.2 0.46 ABZR86_RS01940 triose-phosphate isomerase 0.39 ABZR86_RS10480 3-dehydroquinate synthase — —
Alteromonas macleodii MIT1002 0.46 MIT1002_01868 Triosephosphate isomerase 0.53 MIT1002_00447 3-dehydroquinate synthase — —
Rhodanobacter denitrificans FW104-10B01 0.46 LRK54_RS17500 triose-phosphate isomerase 0.41 LRK54_RS04310 3-dehydroquinate synthase — —
Rahnella sp. WP5 0.46 EX31_RS14300 triose-phosphate isomerase 0.51 EX31_RS04720 3-dehydroquinate synthase — —
Dickeya dianthicola ME23 0.45 DZA65_RS21555 triose-phosphate isomerase 0.48 DZA65_RS20760 3-dehydroquinate synthase — —
Dickeya dianthicola 67-19 0.45 HGI48_RS20510 triose-phosphate isomerase 0.48 HGI48_RS19675 3-dehydroquinate synthase — —
Variovorax sp. OAS795 0.45 ABID97_RS20510 triose-phosphate isomerase 0.63 ABID97_RS23255 3-dehydroquinate synthase — —
Rhodanobacter denitrificans MT42 0.45 LRK55_RS17720 triose-phosphate isomerase 0.41 LRK55_RS04085 3-dehydroquinate synthase — —
Dickeya dadantii 3937 0.45 DDA3937_RS00865 triose-phosphate isomerase 0.49 DDA3937_RS19545 3-dehydroquinate synthase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.44 Echvi_1196 triosephosphate isomerase 0.23 Echvi_0121 3-dehydroquinate synthase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.44 ABZR88_RS14455 triose-phosphate isomerase 0.27 ABZR88_RS05215 3-dehydroquinate synthase — —
Pectobacterium carotovorum WPP14 0.44 HER17_RS00800 triose-phosphate isomerase 0.48 HER17_RS01780 3-dehydroquinate synthase — —
Marinobacter adhaerens HP15 0.43 HP15_3071 triosephosphate isomerase 0.55 HP15_480 3-dehydroquinate synthase — —
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_05590 triosephosphate isomerase 0.55 AO353_12505 3-dehydroquinate synthase — —
Bacteroides stercoris CC31F 0.43 HMPREF1181_RS06595 triose-phosphate isomerase 0.24 HMPREF1181_RS09265 3-dehydroquinate synthase — —
Erwinia tracheiphila SCR3 0.43 LU632_RS19730 tpiA triose-phosphate isomerase 0.48 LU632_RS22865 aroB 3-dehydroquinate synthase — —
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_1164 Triosephosphate isomerase (EC 5.3.1.1) 0.56 Pf1N1B4_1537 3-dehydroquinate synthase (EC 4.2.3.4) — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.42 CA264_14890 triose-phosphate isomerase 0.24 CA264_13105 3-dehydroquinate synthase — —
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_4184 triosephosphate isomerase 0.54 Psyr_0409 3-dehydroquinate synthase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_4184 triosephosphate isomerase 0.54 Psyr_0409 3-dehydroquinate synthase — —
Pseudomonas fluorescens FW300-N2E2 0.42 Pf6N2E2_3356 Triosephosphate isomerase (EC 5.3.1.1) 0.56 Pf6N2E2_3754 3-dehydroquinate synthase (EC 4.2.3.4) — —
Pantoea sp. MT58 0.42 IAI47_00795 triose-phosphate isomerase 0.50 IAI47_01895 3-dehydroquinate synthase — —
Pseudomonas fluorescens FW300-N2C3 0.42 AO356_07440 triosephosphate isomerase 0.56 AO356_09385 3-dehydroquinate synthase — —
Serratia liquefaciens MT49 0.42 IAI46_24635 triose-phosphate isomerase 0.49 IAI46_23700 3-dehydroquinate synthase — —
Pseudomonas sp. RS175 0.42 PFR28_00085 Triosephosphate isomerase 0.54 PFR28_05013 3-dehydroquinate synthase — —
Parabacteroides merdae CL09T00C40 0.42 HMPREF1078_RS12745 triose-phosphate isomerase 0.22 HMPREF1078_RS04395 3-dehydroquinate synthase — —
Enterobacter asburiae PDN3 0.42 EX28DRAFT_4394 triosephosphate isomerase (EC 5.3.1.1) 0.48 EX28DRAFT_4153 3-dehydroquinate synthase (EC 4.2.3.4) — —
Enterobacter sp. TBS_079 0.42 MPMX20_04548 Triosephosphate isomerase 0.49 MPMX20_04278 3-dehydroquinate synthase — —
Pseudomonas putida KT2440 0.42 PP_4715 triose phosphate isomerase 0.58 PP_5078 3-dehydroquinate synthase — —
Escherichia coli ECOR38 0.41 HEPCGN_12455 tpiA triose-phosphate isomerase 0.50 HEPCGN_15935 aroB 3-dehydroquinate synthase — —
Escherichia coli BW25113 0.41 b3919 tpiA triosephosphate isomerase (NCBI) 0.50 b3389 aroB 3-dehydroquinate synthase (NCBI) — —
Escherichia coli ECRC102 0.41 NIAGMN_11565 tpiA triose-phosphate isomerase 0.50 NIAGMN_14885 aroB 3-dehydroquinate synthase — —
Escherichia coli ECRC101 0.41 MCAODC_04310 tpiA triose-phosphate isomerase 0.50 MCAODC_07645 aroB 3-dehydroquinate synthase — —
Escherichia coli ECRC62 0.41 BNILDI_05585 tpiA triose-phosphate isomerase 0.51 BNILDI_02615 aroB 3-dehydroquinate synthase — —
Escherichia coli ECRC99 0.41 KEDOAH_14350 tpiA triose-phosphate isomerase 0.50 KEDOAH_11025 aroB 3-dehydroquinate synthase — —
Escherichia coli ECRC98 0.41 JDDGAC_17435 tpiA triose-phosphate isomerase 0.50 JDDGAC_20745 aroB 3-dehydroquinate synthase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.41 GFF2302 Triosephosphate isomerase (EC 5.3.1.1) 0.48 GFF630 3-dehydroquinate synthase (EC 4.2.3.4) — —
Escherichia coli ECOR27 0.41 NOLOHH_05945 tpiA triose-phosphate isomerase 0.51 NOLOHH_08905 aroB 3-dehydroquinate synthase — —
Pseudomonas fluorescens GW456-L13 0.41 PfGW456L13_5091 Triosephosphate isomerase (EC 5.3.1.1) 0.56 PfGW456L13_275 3-dehydroquinate synthase (EC 4.2.3.4) — —
Escherichia coli BL21 0.41 ECD_03804 triosephosphate isomerase 0.51 ECD_03241 3-dehydroquinate synthase — —
Escherichia coli Nissle 1917 0.41 ECOLIN_RS22575 triose-phosphate isomerase 0.50 ECOLIN_RS19360 3-dehydroquinate synthase low > 55
Escherichia fergusonii Becca 0.41 EFB2_04699 Triosephosphate isomerase 0.50 EFB2_00439 3-dehydroquinate synthase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.41 OHPLBJKB_04132 Triosephosphate isomerase 0.51 OHPLBJKB_00314 3-dehydroquinate synthase — —
Escherichia coli ECRC100 0.41 OKFHMN_13810 tpiA triose-phosphate isomerase 0.50 OKFHMN_17115 aroB 3-dehydroquinate synthase — —
Shewanella oneidensis MR-1 0.41 SO1200 tpiA triosephosphate isomerase (NCBI ptt file) 0.53 SO0287 aroB 3-dehydroquinate synthase (NCBI ptt file) — —
Shewanella sp. ANA-3 0.41 Shewana3_1026 triosephosphate isomerase (RefSeq) 0.52 Shewana3_3893 aroB 3-dehydroquinate synthase (RefSeq) — —
Pseudomonas sp. S08-1 0.41 OH686_17115 triose-phosphate isomerase 0.57 OH686_10015 3-dehydroquinate synthase — —
Pseudomonas fluorescens SBW25 0.41 PFLU_RS25840 triose-phosphate isomerase 0.57 PFLU_RS02030 3-dehydroquinate synthase — —
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS25840 triose-phosphate isomerase 0.57 PFLU_RS02030 3-dehydroquinate synthase — —
Pseudomonas simiae WCS417 0.41 PS417_24000 triosephosphate isomerase 0.57 PS417_01985 3-dehydroquinate synthase — —
Shewanella amazonensis SB2B 0.40 Sama_0957 Triose-phosphate isomerase (RefSeq) 0.55 Sama_3367 3-dehydroquinate synthase (RefSeq) — —
Lysobacter sp. OAE881 0.40 ABIE51_RS08295 triose-phosphate isomerase 0.42 ABIE51_RS16100 3-dehydroquinate synthase — —
Klebsiella michiganensis M5al 0.40 BWI76_RS27465 triose-phosphate isomerase 0.49 BWI76_RS26085 3-dehydroquinate synthase — —
Shewanella loihica PV-4 0.40 Shew_2831 Triose-phosphate isomerase (RefSeq) 0.51 Shew_0214 3-dehydroquinate synthase (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.39 CSW01_13490 triose-phosphate isomerase 0.50 CSW01_13300 3-dehydroquinate synthase — —
Pseudomonas stutzeri RCH2 0.38 Psest_0975 triosephosphate isomerase 0.54 Psest_3713 3-dehydroquinate synthase — —
Sinorhizobium meliloti 1021 0.37 SMc01023 triosephosphate isomerase 0.38 SMc00696 3-dehydroquinate synthase — —
Synechococcus elongatus PCC 7942 0.37 Synpcc7942_1261 tpiA triosephosphate isomerase 0.40 Synpcc7942_0525 aroB 3-dehydroquinate synthase — —
Rhodopseudomonas palustris CGA009 0.37 TX73_014970 triose-phosphate isomerase 0.37 TX73_002610 3-dehydroquinate synthase — —
Magnetospirillum magneticum AMB-1 0.37 AMB_RS09205 triose-phosphate isomerase 0.40 AMB_RS19865 3-dehydroquinate synthase — —
Phaeobacter inhibens DSM 17395 0.37 PGA1_c20650 triosephosphate isomerase TpiA 0.37 PGA1_c14100 3-dehydroquinate synthase AroB — —
Brevundimonas sp. GW460-12-10-14-LB2 0.37 A4249_RS06145 triose-phosphate isomerase 0.38 A4249_RS04175 3-dehydroquinate synthase — —
Rhizobium sp. OAE497 0.35 ABIE40_RS09645 triose-phosphate isomerase 0.38 ABIE40_RS17670 3-dehydroquinate synthase — —
Azospirillum sp. SherDot2 0.35 MPMX19_01241 Triosephosphate isomerase 0.39 MPMX19_02639 3-dehydroquinate synthase — —
Rhodospirillum rubrum S1H 0.35 Rru_A1889 Triosephosphate isomerase (NCBI) 0.43 Rru_A3741 3-dehydroquinate synthase (NCBI) — —
Agrobacterium fabrum C58 0.35 Atu1620 triosephosphate isomerase 0.36 Atu3625 3-dehydroquinate synthase — —
Mycobacterium tuberculosis H37Rv 0.33 Rv1438 Probable triosephosphate isomerase Tpi (TIM) 0.30 Rv2538c 3-dehydroquinate synthase AroB — —
Caulobacter crescentus NA1000 0.33 CCNA_01970 triosephosphate isomerase 0.40 CCNA_03104 3-dehydroquinate synthase — —
Caulobacter crescentus NA1000 Δfur 0.33 CCNA_01970 triosephosphate isomerase 0.40 CCNA_03104 3-dehydroquinate synthase — —
Dinoroseobacter shibae DFL-12 0.33 Dshi_2078 Triose-phosphate isomerase (RefSeq) 0.36 Dshi_1608 3-dehydroquinate synthase (RefSeq) — —
Acinetobacter radioresistens SK82 0.32 MPMX26_00247 Triosephosphate isomerase 0.55 MPMX26_02810 3-dehydroquinate synthase — —
Sphingomonas koreensis DSMZ 15582 0.32 Ga0059261_0254 triosephosphate isomerase (EC 5.3.1.1) 0.35 Ga0059261_3591 3-dehydroquinate synthase (EC 4.2.3.4) — —

Not shown: 9 genomes with orthologs for BPHYT_RS06610 only; 1 genomes with orthologs for BPHYT_RS17885 only