Conservation of cofitness between BPHYT_RS13220 and BPHYT_RS17395 in Burkholderia phytofirmans PsJN

89 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS13220 phosphomethylpyrimidine synthase 1.0 BPHYT_RS17395 anthranilate synthase subunit II 0.70 13
Paraburkholderia graminis OAS925 0.99 ABIE53_002857 phosphomethylpyrimidine synthase 0.95 ABIE53_003641 anthranilate synthase component 2
Paraburkholderia bryophila 376MFSha3.1 0.98 H281DRAFT_00395 hydroxymethylpyrimidine synthase 0.95 H281DRAFT_05714 anthranilate synthase, component II low > 103
Paraburkholderia sabiae LMG 24235 0.95 QEN71_RS05480 phosphomethylpyrimidine synthase ThiC 0.93 QEN71_RS27555 aminodeoxychorismate/anthranilate synthase component II 0.73 60
Herbaspirillum seropedicae SmR1 0.85 HSERO_RS02120 phosphomethylpyrimidine synthase ThiC 0.73 HSERO_RS19440 anthranilate synthase subunit II
Dechlorosoma suillum PS 0.85 Dsui_0422 thiamine biosynthesis protein ThiC 0.70 Dsui_0170 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase
Castellaniella sp019104865 MT123 0.78 ABCV34_RS10825 phosphomethylpyrimidine synthase ThiC 0.65 ABCV34_RS10300 aminodeoxychorismate/anthranilate synthase component II low > 48
Dyella japonica UNC79MFTsu3.2 0.75 ABZR86_RS17230 phosphomethylpyrimidine synthase ThiC 0.62 ABZR86_RS12075 aminodeoxychorismate/anthranilate synthase component II
Marinobacter adhaerens HP15 0.75 HP15_453 thiamine biosynthesis protein thiC 0.61 HP15_3289 para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II 0.77 22
Pseudomonas putida KT2440 0.75 PP_4922 Phosphomethylpyrimidine synthase 0.62 PP_0420 aminodeoxychorismate synthase / para-aminobenzoate synthase multi-enzyme complex 0.44 31
Rhodanobacter sp. FW510-T8 0.74 OKGIIK_16965 thiC phosphomethylpyrimidine synthase ThiC 0.63 OKGIIK_12290 pabA anthranilate/aminodeoxychorismate synthase component II low > 52
Pseudomonas sp. S08-1 0.74 OH686_15885 phosphomethylpyrimidine synthase 0.63 OH686_15130 Anthranilate synthase, amidotransferase component or Para-aminobenzoate synthase, amidotransferase component
Pseudomonas stutzeri RCH2 0.74 Psest_0477 thiamine biosynthesis protein ThiC 0.62 Psest_3649 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase low > 67
Pseudomonas fluorescens FW300-N2E2 0.74 Pf6N2E2_3644 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.63 Pf6N2E2_4824 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) low > 103
Xanthomonas campestris pv. campestris strain 8004 0.74 Xcc-8004.1066.1 hypothetical protein 0.59 Xcc-8004.618.1 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) low > 74
Pseudomonas fluorescens FW300-N2C3 0.74 AO356_08810 thiamine biosynthesis protein ThiC 0.63 AO356_14430 anthranilate synthase low > 104
Pseudomonas fluorescens FW300-N2E3 0.74 AO353_13010 thiamine biosynthesis protein ThiC 0.62 AO353_07220 anthranilate synthase low > 101
Pseudomonas sp. RS175 0.74 PFR28_05091 Phosphomethylpyrimidine synthase 0.63 PFR28_04045 Anthranilate synthase component 2
Pseudomonas fluorescens FW300-N1B4 0.73 Pf1N1B4_1447 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.63 Pf1N1B4_2547 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) low > 87
Pseudomonas fluorescens SBW25 0.73 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC 0.61 PFLU_RS27375 aminodeoxychorismate/anthranilate synthase component II low > 109
Pseudomonas fluorescens GW456-L13 0.73 PfGW456L13_187 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.63 PfGW456L13_1220 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) low > 87
Pseudomonas fluorescens SBW25-INTG 0.73 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC 0.61 PFLU_RS27375 aminodeoxychorismate/anthranilate synthase component II low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.73 Psyr_0544 hydroxymethylpyrimidine synthase 0.63 Psyr_4581 anthranilate synthase, component II
Pseudomonas syringae pv. syringae B728a 0.73 Psyr_0544 hydroxymethylpyrimidine synthase 0.63 Psyr_4581 anthranilate synthase, component II low > 86
Pseudomonas simiae WCS417 0.73 PS417_02355 thiamine biosynthesis protein ThiC 0.62 PS417_25720 anthranilate synthase component II low > 88
Lysobacter sp. OAE881 0.73 ABIE51_RS17515 phosphomethylpyrimidine synthase ThiC 0.61 ABIE51_RS04175 aminodeoxychorismate/anthranilate synthase component II low > 62
Mucilaginibacter yixingensis YX-36 DSM 26809 0.72 ABZR88_RS08840 phosphomethylpyrimidine synthase ThiC 0.41 ABZR88_RS16600 aminodeoxychorismate/anthranilate synthase component II
Pontibacter actiniarum KMM 6156, DSM 19842 0.72 CA264_20435 phosphomethylpyrimidine synthase ThiC 0.43 CA264_05060 glutamine amidotransferase low > 74
Acinetobacter radioresistens SK82 0.71 MPMX26_00180 Phosphomethylpyrimidine synthase 0.61 MPMX26_00985 Anthranilate synthase component 2 low > 36
Pedobacter sp. GW460-11-11-14-LB5 0.71 CA265_RS20165 phosphomethylpyrimidine synthase ThiC 0.41 CA265_RS22895 aminodeoxychorismate/anthranilate synthase component II low > 88
Echinicola vietnamensis KMM 6221, DSM 17526 0.71 Echvi_3567 thiamine biosynthesis protein ThiC 0.42 Echvi_2506 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase low > 79
Ralstonia solanacearum PSI07 0.69 RPSI07_RS23420 phosphomethylpyrimidine synthase ThiC 0.78 RPSI07_RS10750 type 1 glutamine amidotransferase
Pectobacterium carotovorum WPP14 0.69 HER17_RS20380 phosphomethylpyrimidine synthase ThiC 0.60 HER17_RS01905 aminodeoxychorismate synthase component II low > 75
Shewanella loihica PV-4 0.69 Shew_2096 thiamine biosynthesis protein ThiC (RefSeq) 0.53 Shew_0575 glutamine amidotransferase of anthranilate synthase (RefSeq) low > 60
Ralstonia sp. UNC404CL21Col 0.68 ABZR87_RS04785 phosphomethylpyrimidine synthase ThiC 0.76 ABZR87_RS02145 aminodeoxychorismate/anthranilate synthase component II low > 80
Cupriavidus basilensis FW507-4G11 0.68 RR42_RS01290 thiamine biosynthesis protein ThiC 0.76 RR42_RS18300 anthranilate synthase subunit II 0.70 29
Ralstonia solanacearum UW163 0.68 UW163_RS03640 phosphomethylpyrimidine synthase ThiC 0.78 UW163_RS07135 type 1 glutamine amidotransferase
Ralstonia solanacearum IBSBF1503 0.68 RALBFv3_RS09940 phosphomethylpyrimidine synthase ThiC 0.78 RALBFv3_RS06490 type 1 glutamine amidotransferase low > 76
Shewanella amazonensis SB2B 0.68 Sama_1860 thiamine biosynthesis protein ThiC (RefSeq) 0.50 Sama_3015 para-aminobenzoate synthase glutamine amidotransferase, component II (RefSeq) low > 62
Rahnella sp. WP5 0.68 EX31_RS16815 phosphomethylpyrimidine synthase ThiC 0.55 EX31_RS04635 aminodeoxychorismate synthase component II 0.38 19
Ralstonia solanacearum GMI1000 0.68 RS_RS00555 phosphomethylpyrimidine synthase 0.77 RS_RS14435 type 1 glutamine amidotransferase
Enterobacter sp. TBS_079 0.68 MPMX20_00217 Phosphomethylpyrimidine synthase 0.57 MPMX20_04263 Aminodeoxychorismate synthase component 2 low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.68 GFF4198 Thiamin biosynthesis protein ThiC 0.59 GFF3709 Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) low > 78
Serratia liquefaciens MT49 0.67 IAI46_01320 phosphomethylpyrimidine synthase ThiC 0.59 IAI46_23595 aminodeoxychorismate synthase component II 0.41 62
Enterobacter asburiae PDN3 0.67 EX28DRAFT_4536 phosphomethylpyrimidine synthase 0.57 EX28DRAFT_4169 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase low > 76
Escherichia coli Nissle 1917 0.67 ECOLIN_RS23040 phosphomethylpyrimidine synthase ThiC 0.59 ECOLIN_RS19245 aminodeoxychorismate synthase component 2 0.53 51
Escherichia fergusonii Becca 0.67 EFB2_04617 Phosphomethylpyrimidine synthase 0.59 EFB2_00462 Aminodeoxychorismate synthase component 2 low > 86
Escherichia coli ECOR27 0.67 NOLOHH_05520 thiC phosphomethylpyrimidine synthase ThiC 0.59 NOLOHH_09020 pabA aminodeoxychorismate synthase component 2 low > 75
Escherichia coli ECRC102 0.67 NIAGMN_11125 thiC phosphomethylpyrimidine synthase ThiC 0.59 NIAGMN_14990 pabA aminodeoxychorismate synthase component 2
Escherichia coli ECRC100 0.67 OKFHMN_13375 thiC phosphomethylpyrimidine synthase ThiC 0.59 OKFHMN_17220 pabA aminodeoxychorismate synthase component 2 low > 80
Escherichia coli ECRC101 0.67 MCAODC_03875 thiC phosphomethylpyrimidine synthase ThiC 0.59 MCAODC_07750 pabA aminodeoxychorismate synthase component 2 low > 87
Escherichia coli ECRC99 0.67 KEDOAH_14785 thiC phosphomethylpyrimidine synthase ThiC 0.59 KEDOAH_10920 pabA aminodeoxychorismate synthase component 2
Escherichia coli BW25113 0.67 b3994 thiC thiamine biosynthesis protein ThiC (NCBI) 0.59 b3360 pabA para-aminobenzoate synthase component II (NCBI) low > 76
Escherichia coli ECRC62 0.67 BNILDI_06005 thiC phosphomethylpyrimidine synthase ThiC 0.59 BNILDI_02500 pabA aminodeoxychorismate synthase component 2 low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_04056 Phosphomethylpyrimidine synthase 0.59 OHPLBJKB_00342 Aminodeoxychorismate synthase component 2 low > 73
Escherichia coli ECRC98 0.67 JDDGAC_17000 thiC phosphomethylpyrimidine synthase ThiC 0.59 JDDGAC_20850 pabA aminodeoxychorismate synthase component 2 low > 86
Escherichia coli BL21 0.67 ECD_03871 phosphomethylpyrimidine synthase 0.59 ECD_03211 aminodeoxychorismate synthase, subunit II low > 61
Escherichia coli ECOR38 0.67 HEPCGN_12010 thiC phosphomethylpyrimidine synthase ThiC 0.58 HEPCGN_16050 pabA aminodeoxychorismate synthase component 2 low > 87
Klebsiella michiganensis M5al 0.67 BWI76_RS01555 phosphomethylpyrimidine synthase ThiC 0.57 BWI76_RS26005 glutamine amidotransferase low > 92
Pantoea sp. MT58 0.67 IAI47_18085 phosphomethylpyrimidine synthase ThiC 0.57 IAI47_01950 aminodeoxychorismate/anthranilate synthase component II low > 76
Dickeya dadantii 3937 0.67 DDA3937_RS01175 phosphomethylpyrimidine synthase ThiC 0.60 DDA3937_RS19455 aminodeoxychorismate synthase component II
Variovorax sp. SCN45 0.67 GFF2000 Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) 0.63 GFF5894 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)
Erwinia tracheiphila SCR3 0.67 LU632_RS00970 thiC phosphomethylpyrimidine synthase ThiC 0.56 LU632_RS22815 aminodeoxychorismate synthase component II
Shewanella oneidensis MR-1 0.67 SO2445 thiC thiamin biosynthesis protein ThiC (NCBI ptt file) 0.51 SO0613 pabA para-aminobenzoate synthase glutamine amidotransferase, component II (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.66 CSW01_00335 phosphomethylpyrimidine synthase 0.57 CSW01_13255 aminodeoxychorismate/anthranilate synthase component II low > 62
Alteromonas macleodii MIT1002 0.66 MIT1002_00097 Phosphomethylpyrimidine synthase 0.52 MIT1002_00439 Para-aminobenzoate synthase glutamine amidotransferase component II 0.77 39
Shewanella sp. ANA-3 0.66 Shewana3_1936 thiamine biosynthesis protein ThiC (RefSeq) 0.52 Shewana3_0606 aminodeoxychorismate synthase, glutamine amidotransferase subunit (RefSeq) low > 73
Dickeya dianthicola ME23 0.66 DZA65_RS01215 phosphomethylpyrimidine synthase ThiC 0.59 DZA65_RS20660 aminodeoxychorismate synthase component II low > 75
Dickeya dianthicola 67-19 0.66 HGI48_RS01170 phosphomethylpyrimidine synthase ThiC 0.59 HGI48_RS19575 aminodeoxychorismate synthase component II
Hydrogenophaga sp. GW460-11-11-14-LB1 0.66 GFF4626 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.65 GFF3107 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) low > 90
Acidovorax sp. GW101-3H11 0.65 Ac3H11_2027 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.65 Ac3H11_769 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) 0.88 21
Variovorax sp. OAS795 0.65 ABID97_RS25235 phosphomethylpyrimidine synthase ThiC 0.61 ABID97_RS05260 aminodeoxychorismate/anthranilate synthase component II low > 91
Azospirillum brasilense Sp245 0.64 AZOBR_RS07940 phosphomethylpyrimidine synthase 0.54 AZOBR_RS07460 anthranilate synthase
Magnetospirillum magneticum AMB-1 0.63 AMB_RS01125 phosphomethylpyrimidine synthase 0.60 AMB_RS14405 type 1 glutamine amidotransferase
Phaeobacter inhibens DSM 17395 0.62 PGA1_c09110 thiamine biosynthesis protein ThiC 0.56 PGA1_c16880 anthranilate synthase component II
Sphingomonas koreensis DSMZ 15582 0.62 Ga0059261_2424 hydroxymethylpyrimidine synthase 0.47 Ga0059261_0926 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 0.91 9
Dinoroseobacter shibae DFL-12 0.62 Dshi_4080 thiamine biosynthesis protein ThiC (RefSeq) 0.56 Dshi_1798 glutamine amidotransferase of anthranilate synthase (RefSeq)
Caulobacter crescentus NA1000 0.61 CCNA_02109 thiamine biosynthesis protein thiC 0.57 CCNA_01974 anthranilate synthase component II/para-aminobenzoate synthase glutamine amidotransferase component II low > 66
Caulobacter crescentus NA1000 Δfur 0.61 CCNA_02109 thiamine biosynthesis protein thiC 0.57 CCNA_01974 anthranilate synthase component II/para-aminobenzoate synthase glutamine amidotransferase component II low > 67
Brevundimonas sp. GW460-12-10-14-LB2 0.60 A4249_RS15715 phosphomethylpyrimidine synthase ThiC 0.57 A4249_RS06165 aminodeoxychorismate/anthranilate synthase component II low > 48
Bosea sp. OAE506 0.60 ABIE41_RS02770 phosphomethylpyrimidine synthase ThiC 0.48 ABIE41_RS17415 aminodeoxychorismate/anthranilate synthase component II
Azospirillum sp. SherDot2 0.60 MPMX19_00336 Phosphomethylpyrimidine synthase 0.56 MPMX19_01016 Anthranilate synthase component 2
Rhodospirillum rubrum S1H 0.57 Rru_A2008 Thiamine biosynthesis protein ThiC (NCBI) 0.53 Rru_A1895 Glutamine amidotransferase of anthranilate synthase (NCBI) low > 58
Phocaeicola dorei CL03T12C01 0.56 ABI39_RS17760 phosphomethylpyrimidine synthase ThiC 0.42 ABI39_RS21055 aminodeoxychorismate/anthranilate synthase component II 0.54 50
Phocaeicola vulgatus CL09T03C04 0.56 HMPREF1058_RS03280 phosphomethylpyrimidine synthase ThiC 0.43 HMPREF1058_RS07180 aminodeoxychorismate/anthranilate synthase component II 0.80 13
Bacteroides stercoris CC31F 0.56 HMPREF1181_RS14685 phosphomethylpyrimidine synthase ThiC 0.45 HMPREF1181_RS15330 aminodeoxychorismate/anthranilate synthase component II low > 56
Bacteroides ovatus ATCC 8483 0.56 BACOVA_02358 thiamine biosynthesis protein ThiC 0.43 BACOVA_03781 glutamine amidotransferase, class I 0.69 77
Bacteroides thetaiotaomicron VPI-5482 0.56 BT0650 thiamine biosynthesis protein ThiC (NCBI ptt file) 0.43 BT0531 anthranilate synthase component II (NCBI ptt file) 0.35 75
Parabacteroides merdae CL09T00C40 0.56 HMPREF1078_RS03485 phosphomethylpyrimidine synthase ThiC 0.42 HMPREF1078_RS00140 aminodeoxychorismate/anthranilate synthase component II low > 61
Mycobacterium tuberculosis H37Rv 0.51 Rv0423c Probable thiamine biosynthesis protein ThiC 0.43 Rv0013 Possible anthranilate synthase component II TrpG (glutamine amidotransferase)

Not shown: 4 genomes with orthologs for BPHYT_RS13220 only; 9 genomes with orthologs for BPHYT_RS17395 only