Conservation of cofitness between BPHYT_RS06610 and BPHYT_RS16840 in Burkholderia phytofirmans PsJN

85 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS06610 triosephosphate isomerase 1.0 BPHYT_RS16840 transketolase 0.76 16
Paraburkholderia graminis OAS925 0.88 ABIE53_001588 triosephosphate isomerase 0.95 ABIE53_003537 transketolase — —
Paraburkholderia bryophila 376MFSha3.1 0.87 H281DRAFT_04564 triosephosphate isomerase 0.95 H281DRAFT_06314 transketolase — —
Paraburkholderia sabiae LMG 24235 0.80 QEN71_RS24165 triose-phosphate isomerase 0.90 QEN71_RS27010 transketolase — —
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS05495 triosephosphate isomerase 0.69 RR42_RS17575 transketolase — —
Ralstonia sp. UNC404CL21Col 0.60 ABZR87_RS14895 triose-phosphate isomerase 0.69 ABZR87_RS01440 transketolase — —
Ralstonia solanacearum GMI1000 0.59 RS_RS10360 triose-phosphate isomerase 0.68 RS_RS13760 transketolase — —
Ralstonia solanacearum PSI07 0.59 RPSI07_RS14320 triose-phosphate isomerase 0.68 RPSI07_RS11430 transketolase — —
Ralstonia solanacearum IBSBF1503 0.59 RALBFv3_RS02990 triose-phosphate isomerase 0.68 RALBFv3_RS05870 transketolase — —
Ralstonia solanacearum UW163 0.59 UW163_RS10735 triose-phosphate isomerase 0.68 UW163_RS07755 transketolase — —
Acidovorax sp. GW101-3H11 0.51 Ac3H11_1454 Triosephosphate isomerase (EC 5.3.1.1) 0.63 Ac3H11_649 Transketolase (EC 2.2.1.1) — —
Castellaniella sp019104865 MT123 0.51 ABCV34_RS01320 triose-phosphate isomerase 0.66 ABCV34_RS15450 transketolase — —
Xanthomonas campestris pv. campestris strain 8004 0.49 Xcc-8004.1979.1 Triosephosphate isomerase (EC 5.3.1.1) 0.59 Xcc-8004.1180.1 Transketolase (EC 2.2.1.1) — —
Variovorax sp. SCN45 0.49 GFF4748 Triosephosphate isomerase (EC 5.3.1.1) 0.60 GFF7176 Transketolase (EC 2.2.1.1) — —
Dechlorosoma suillum PS 0.49 Dsui_3052 triosephosphate isomerase 0.63 Dsui_1561 transketolase — —
Kangiella aquimarina DSM 16071 0.48 B158DRAFT_0649 triosephosphate isomerase (EC 5.3.1.1) 0.62 B158DRAFT_0510 transketolase, bacterial and yeast — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.48 GFF3679 Triosephosphate isomerase (EC 5.3.1.1) 0.62 GFF2487 Transketolase (EC 2.2.1.1) — —
Dyella japonica UNC79MFTsu3.2 0.46 ABZR86_RS01940 triose-phosphate isomerase 0.61 ABZR86_RS18655 transketolase — —
Rhodanobacter sp. FW510-T8 0.46 OKGIIK_07435 tpiA triose-phosphate isomerase 0.60 OKGIIK_01095 tkt transketolase — —
Alteromonas macleodii MIT1002 0.46 MIT1002_01868 Triosephosphate isomerase 0.64 MIT1002_00861 Transketolase 1 — —
Rhodanobacter denitrificans FW104-10B01 0.46 LRK54_RS17500 triose-phosphate isomerase 0.62 LRK54_RS05750 transketolase — —
Rahnella sp. WP5 0.46 EX31_RS14300 triose-phosphate isomerase 0.63 EX31_RS20285 transketolase — —
Herbaspirillum seropedicae SmR1 0.45 HSERO_RS08805 triosephosphate isomerase 0.71 HSERO_RS07115 transketolase — —
Dickeya dianthicola ME23 0.45 DZA65_RS21555 triose-phosphate isomerase 0.63 DZA65_RS19585 transketolase — —
Variovorax sp. OAS795 0.45 ABID97_RS20510 triose-phosphate isomerase 0.59 ABID97_RS02445 transketolase — —
Dickeya dianthicola 67-19 0.45 HGI48_RS20510 triose-phosphate isomerase 0.63 HGI48_RS18450 transketolase — —
Rhodanobacter denitrificans MT42 0.45 LRK55_RS17720 triose-phosphate isomerase 0.61 LRK55_RS05505 transketolase — —
Dickeya dadantii 3937 0.45 DDA3937_RS00865 triose-phosphate isomerase 0.64 DDA3937_RS18525 transketolase — —
Bacteroides ovatus ATCC 8483 0.44 BACOVA_01155 triose-phosphate isomerase 0.29 BACOVA_01706 Transketolase, thiamine diphosphate binding domain protein — —
Bacteroides thetaiotaomicron VPI-5482 0.44 BT3929 triosephosphate isomerase (NCBI ptt file) 0.30 BT0347 transketolase (NCBI ptt file) — —
Pectobacterium carotovorum WPP14 0.44 HER17_RS00800 triose-phosphate isomerase 0.63 HER17_RS02680 transketolase — —
Marinobacter adhaerens HP15 0.43 HP15_3071 triosephosphate isomerase 0.61 HP15_2913 bacterial transketolase — —
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_05590 triosephosphate isomerase 0.62 AO353_07955 transketolase — —
Bacteroides stercoris CC31F 0.43 HMPREF1181_RS06595 triose-phosphate isomerase 0.28 HMPREF1181_RS04450 transketolase — —
Erwinia tracheiphila SCR3 0.43 LU632_RS19730 tpiA triose-phosphate isomerase 0.63 LU632_RS05520 tkt transketolase — —
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_1164 Triosephosphate isomerase (EC 5.3.1.1) 0.62 Pf1N1B4_2397 Transketolase (EC 2.2.1.1) — —
Pseudomonas fluorescens FW300-N2E2 0.42 Pf6N2E2_3356 Triosephosphate isomerase (EC 5.3.1.1) 0.62 Pf6N2E2_4655 Transketolase (EC 2.2.1.1) — —
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_4184 triosephosphate isomerase 0.63 Psyr_4792 transketolase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_4184 triosephosphate isomerase 0.63 Psyr_4792 transketolase — —
Pseudomonas fluorescens FW300-N2C3 0.42 AO356_07440 triosephosphate isomerase 0.62 AO356_13680 transketolase — —
Pantoea sp. MT58 0.42 IAI47_00795 triose-phosphate isomerase 0.64 IAI47_03680 transketolase — —
Parabacteroides merdae CL09T00C40 0.42 HMPREF1078_RS12745 triose-phosphate isomerase 0.27 HMPREF1078_RS08725 transketolase — —
Serratia liquefaciens MT49 0.42 IAI46_24635 triose-phosphate isomerase 0.63 IAI46_21045 transketolase — —
Pseudomonas sp. RS175 0.42 PFR28_00085 Triosephosphate isomerase 0.62 PFR28_04188 Transketolase 1 — —
Pseudomonas putida KT2440 0.42 PP_4715 triose phosphate isomerase 0.63 PP_4965 transketolase A — —
Enterobacter sp. TBS_079 0.42 MPMX20_04548 Triosephosphate isomerase 0.64 MPMX20_03780 Transketolase 1 — —
Enterobacter asburiae PDN3 0.42 EX28DRAFT_4394 triosephosphate isomerase (EC 5.3.1.1) 0.63 EX28DRAFT_2974 transketolase, bacterial and yeast — —
Escherichia coli Nissle 1917 0.41 ECOLIN_RS22575 triose-phosphate isomerase 0.65 ECOLIN_RS16330 transketolase 0.48 12
Escherichia coli ECRC101 0.41 MCAODC_04310 tpiA triose-phosphate isomerase 0.65 MCAODC_09845 tkt transketolase — —
Escherichia coli ECRC62 0.41 BNILDI_05585 tpiA triose-phosphate isomerase 0.65 BNILDI_09775 tkt transketolase — —
Escherichia fergusonii Becca 0.41 EFB2_04699 Triosephosphate isomerase 0.65 EFB2_00966 Transketolase 1 — —
Escherichia coli ECOR27 0.41 NOLOHH_05945 tpiA triose-phosphate isomerase 0.65 NOLOHH_11230 tkt transketolase — —
Escherichia coli BL21 0.41 ECD_03804 triosephosphate isomerase 0.65 ECD_02765 transketolase 1, thiamine triphosphate-binding — —
Escherichia coli ECRC98 0.41 JDDGAC_17435 tpiA triose-phosphate isomerase 0.65 JDDGAC_22955 tkt transketolase — —
Escherichia coli ECRC100 0.41 OKFHMN_13810 tpiA triose-phosphate isomerase 0.65 OKFHMN_19325 tkt transketolase — —
Escherichia coli ECRC99 0.41 KEDOAH_14350 tpiA triose-phosphate isomerase 0.65 KEDOAH_08815 tkt transketolase — —
Escherichia coli BW25113 0.41 b3919 tpiA triosephosphate isomerase (NCBI) 0.65 b2935 tktA transketolase 1, thiamin-binding (NCBI) — —
Escherichia coli ECRC102 0.41 NIAGMN_11565 tpiA triose-phosphate isomerase 0.65 NIAGMN_17090 tkt transketolase — —
Escherichia coli ECOR38 0.41 HEPCGN_12455 tpiA triose-phosphate isomerase 0.65 HEPCGN_18630 tkt transketolase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.41 GFF2302 Triosephosphate isomerase (EC 5.3.1.1) 0.64 GFF3028 Transketolase (EC 2.2.1.1) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.41 OHPLBJKB_04132 Triosephosphate isomerase 0.65 OHPLBJKB_00781 Transketolase 1 — —
Pseudomonas fluorescens GW456-L13 0.41 PfGW456L13_5091 Triosephosphate isomerase (EC 5.3.1.1) 0.59 PfGW456L13_1064 Transketolase (EC 2.2.1.1) — —
Shewanella sp. ANA-3 0.41 Shewana3_1026 triosephosphate isomerase (RefSeq) 0.64 Shewana3_3353 transketolase (RefSeq) — —
Shewanella oneidensis MR-1 0.41 SO1200 tpiA triosephosphate isomerase (NCBI ptt file) 0.64 SO0930 tkt transketolase (NCBI ptt file) — —
Pseudomonas sp. S08-1 0.41 OH686_17115 triose-phosphate isomerase 0.63 OH686_10770 transketolase — —
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS25840 triose-phosphate isomerase 0.63 PFLU_RS28095 transketolase — —
Pseudomonas fluorescens SBW25 0.41 PFLU_RS25840 triose-phosphate isomerase 0.63 PFLU_RS28095 transketolase — —
Pseudomonas simiae WCS417 0.41 PS417_24000 triosephosphate isomerase 0.62 PS417_26440 transketolase — —
Lysobacter sp. OAE881 0.40 ABIE51_RS08295 triose-phosphate isomerase 0.61 ABIE51_RS17120 transketolase — —
Shewanella amazonensis SB2B 0.40 Sama_0957 Triose-phosphate isomerase (RefSeq) 0.63 Sama_2759 transketolase (RefSeq) — —
Klebsiella michiganensis M5al 0.40 BWI76_RS27465 triose-phosphate isomerase 0.64 BWI76_RS24015 transketolase — —
Shewanella loihica PV-4 0.40 Shew_2831 Triose-phosphate isomerase (RefSeq) 0.64 Shew_0752 transketolase (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.39 CSW01_13490 triose-phosphate isomerase 0.65 CSW01_17330 transketolase — —
Pseudomonas stutzeri RCH2 0.38 Psest_0975 triosephosphate isomerase 0.65 Psest_0328 transketolase, bacterial and yeast — —
Sinorhizobium meliloti 1021 0.37 SMc01023 triosephosphate isomerase 0.51 SMc02342 transketolase low > 103
Synechococcus elongatus PCC 7942 0.37 Synpcc7942_1261 tpiA triosephosphate isomerase 0.47 Synpcc7942_0538 tktA transketolase — —
Rhodopseudomonas palustris CGA009 0.37 TX73_014970 triose-phosphate isomerase 0.48 TX73_024110 transketolase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.37 A4249_RS06145 triose-phosphate isomerase 0.43 A4249_RS00780 transketolase — —
Azospirillum sp. SherDot2 0.35 MPMX19_01241 Triosephosphate isomerase 0.58 MPMX19_02942 Transketolase 1 — —
Rhizobium sp. OAE497 0.35 ABIE40_RS09645 triose-phosphate isomerase 0.44 ABIE40_RS15865 transketolase — —
Rhodospirillum rubrum S1H 0.35 Rru_A1889 Triosephosphate isomerase (NCBI) 0.54 Rru_A2405 transketolase (NCBI) — —
Agrobacterium fabrum C58 0.35 Atu1620 triosephosphate isomerase 0.44 Atu3736 transketolase — —
Desulfovibrio vulgaris Hildenborough JW710 0.34 DVU1677 tpiA triosephosphate isomerase (TIGR) 0.57 DVU2530 tkt transketolase (TIGR) — —
Acinetobacter radioresistens SK82 0.32 MPMX26_00247 Triosephosphate isomerase 0.60 MPMX26_01775 Transketolase 1 — —
Sphingomonas koreensis DSMZ 15582 0.32 Ga0059261_0254 triosephosphate isomerase (EC 5.3.1.1) 0.46 Ga0059261_0731 transketolase, bacterial and yeast — —
Desulfovibrio vulgaris Miyazaki F 0.30 DvMF_0348 Triose-phosphate isomerase (RefSeq) 0.57 DvMF_0976 transketolase (RefSeq) — —

Not shown: 13 genomes with orthologs for BPHYT_RS06610 only; 1 genomes with orthologs for BPHYT_RS16840 only