Conservation of cofitness between BPHYT_RS17885 and BPHYT_RS13705 in Burkholderia phytofirmans PsJN

89 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS17885 3-dehydroquinate synthase 1.0 BPHYT_RS13705 chorismate synthase 0.92 5
Paraburkholderia graminis OAS925 0.96 ABIE53_003740 3-dehydroquinate synthase 0.97 ABIE53_002916 chorismate synthase — —
Paraburkholderia bryophila 376MFSha3.1 0.96 H281DRAFT_05615 3-dehydroquinate synthase 0.97 H281DRAFT_04489 chorismate synthase — —
Paraburkholderia sabiae LMG 24235 0.89 QEN71_RS28035 3-dehydroquinate synthase 0.95 QEN71_RS05215 chorismate synthase 0.86 10
Cupriavidus basilensis FW507-4G11 0.75 RR42_RS19005 3-dehydroquinate synthase 0.86 RR42_RS06485 chorismate synthase 0.89 3
Ralstonia solanacearum UW163 0.72 UW163_RS06680 3-dehydroquinate synthase 0.84 UW163_RS15160 chorismate synthase — —
Ralstonia solanacearum IBSBF1503 0.72 RALBFv3_RS06935 3-dehydroquinate synthase 0.84 RALBFv3_RS01850 chorismate synthase — —
Ralstonia solanacearum PSI07 0.71 RPSI07_RS10300 3-dehydroquinate synthase 0.84 RPSI07_RS15640 chorismate synthase — —
Ralstonia sp. UNC404CL21Col 0.71 ABZR87_RS02590 3-dehydroquinate synthase 0.87 ABZR87_RS13790 chorismate synthase 0.92 1
Ralstonia solanacearum GMI1000 0.71 RS_RS14880 3-dehydroquinate synthase 0.84 RS_RS07885 chorismate synthase — —
Variovorax sp. OAS795 0.63 ABID97_RS23255 3-dehydroquinate synthase 0.70 ABID97_RS19805 chorismate synthase — —
Variovorax sp. SCN45 0.61 GFF5325 3-dehydroquinate synthase (EC 4.2.3.4) 0.70 GFF2627 Chorismate synthase (EC 4.2.3.5) 0.64 51
Hydrogenophaga sp. GW460-11-11-14-LB1 0.60 GFF1331 3-dehydroquinate synthase (EC 4.2.3.4) 0.77 GFF5239 Chorismate synthase (EC 4.2.3.5) 0.80 5
Castellaniella sp019104865 MT123 0.58 ABCV34_RS12705 3-dehydroquinate synthase 0.76 ABCV34_RS04300 chorismate synthase — —
Pseudomonas putida KT2440 0.58 PP_5078 3-dehydroquinate synthase 0.66 PP_1830 Chorismate synthase — —
Pseudomonas fluorescens SBW25 0.57 PFLU_RS02030 3-dehydroquinate synthase 0.64 PFLU_RS21280 chorismate synthase — —
Pseudomonas sp. S08-1 0.57 OH686_10015 3-dehydroquinate synthase 0.66 OH686_00675 chorismate synthase — —
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS02030 3-dehydroquinate synthase 0.64 PFLU_RS21280 chorismate synthase — —
Pseudomonas simiae WCS417 0.57 PS417_01985 3-dehydroquinate synthase 0.64 PS417_19315 chorismate synthase — —
Dechlorosoma suillum PS 0.57 Dsui_1095 3-dehydroquinate synthase 0.77 Dsui_3204 chorismate synthase — —
Acidovorax sp. GW101-3H11 0.56 Ac3H11_4705 3-dehydroquinate synthase (EC 4.2.3.4) 0.76 Ac3H11_2925 Chorismate synthase (EC 4.2.3.5) 0.83 1
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_275 3-dehydroquinate synthase (EC 4.2.3.4) 0.65 PfGW456L13_4165 Chorismate synthase (EC 4.2.3.5) 0.73 8
Pseudomonas fluorescens FW300-N2E2 0.56 Pf6N2E2_3754 3-dehydroquinate synthase (EC 4.2.3.4) 0.64 Pf6N2E2_5822 Chorismate synthase (EC 4.2.3.5) — —
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_1537 3-dehydroquinate synthase (EC 4.2.3.4) 0.65 Pf1N1B4_3780 Chorismate synthase (EC 4.2.3.5) — —
Pseudomonas fluorescens FW300-N2C3 0.56 AO356_09385 3-dehydroquinate synthase 0.64 AO356_19540 chorismate synthase — —
Marinobacter adhaerens HP15 0.55 HP15_480 3-dehydroquinate synthase 0.71 HP15_1838 chorismate synthase — —
Shewanella amazonensis SB2B 0.55 Sama_3367 3-dehydroquinate synthase (RefSeq) 0.65 Sama_2159 chorismate synthase (RefSeq) — —
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_12505 3-dehydroquinate synthase 0.65 AO353_02250 chorismate synthase — —
Acinetobacter radioresistens SK82 0.55 MPMX26_02810 3-dehydroquinate synthase 0.58 MPMX26_01340 Chorismate synthase — —
Pseudomonas sp. RS175 0.54 PFR28_05013 3-dehydroquinate synthase 0.64 PFR28_03126 Chorismate synthase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.54 Psyr_0409 3-dehydroquinate synthase 0.65 Psyr_1853 chorismate synthase — —
Pseudomonas syringae pv. syringae B728a 0.54 Psyr_0409 3-dehydroquinate synthase 0.65 Psyr_1853 chorismate synthase — —
Pseudomonas stutzeri RCH2 0.54 Psest_3713 3-dehydroquinate synthase 0.65 Psest_1903 chorismate synthase — —
Alteromonas macleodii MIT1002 0.53 MIT1002_00447 3-dehydroquinate synthase 0.66 MIT1002_01229 Chorismate synthase — —
Shewanella sp. ANA-3 0.52 Shewana3_3893 aroB 3-dehydroquinate synthase (RefSeq) 0.62 Shewana3_1469 chorismate synthase (RefSeq) 0.95 3
Shewanella loihica PV-4 0.51 Shew_0214 3-dehydroquinate synthase (RefSeq) 0.63 Shew_2416 chorismate synthase (RefSeq) 0.87 3
Rahnella sp. WP5 0.51 EX31_RS04720 3-dehydroquinate synthase 0.63 EX31_RS19685 chorismate synthase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.51 OHPLBJKB_00314 3-dehydroquinate synthase 0.62 OHPLBJKB_01376 Chorismate synthase low > 73
Escherichia coli ECOR27 0.51 NOLOHH_08905 aroB 3-dehydroquinate synthase 0.62 NOLOHH_14250 aroC chorismate synthase 0.94 7
Escherichia coli BL21 0.51 ECD_03241 3-dehydroquinate synthase 0.62 ECD_02254 chorismate synthase 0.74 4
Escherichia coli ECRC62 0.51 BNILDI_02615 aroB 3-dehydroquinate synthase 0.62 BNILDI_13170 aroC chorismate synthase 0.95 6
Escherichia coli Nissle 1917 0.50 ECOLIN_RS19360 3-dehydroquinate synthase 0.62 ECOLIN_RS13490 chorismate synthase — —
Escherichia coli ECRC99 0.50 KEDOAH_11025 aroB 3-dehydroquinate synthase 0.62 KEDOAH_05580 aroC chorismate synthase — —
Escherichia coli ECOR38 0.50 HEPCGN_15935 aroB 3-dehydroquinate synthase 0.62 HEPCGN_21820 aroC chorismate synthase 0.92 4
Escherichia fergusonii Becca 0.50 EFB2_00439 3-dehydroquinate synthase 0.62 EFB2_01529 Chorismate synthase low > 86
Pantoea sp. MT58 0.50 IAI47_01895 3-dehydroquinate synthase 0.61 IAI47_06150 chorismate synthase — —
Escherichia coli ECRC101 0.50 MCAODC_07645 aroB 3-dehydroquinate synthase 0.62 MCAODC_13655 aroC chorismate synthase 0.86 8
Escherichia coli ECRC100 0.50 OKFHMN_17115 aroB 3-dehydroquinate synthase 0.62 OKFHMN_22615 aroC chorismate synthase 0.94 50
Escherichia coli ECRC98 0.50 JDDGAC_20745 aroB 3-dehydroquinate synthase 0.62 JDDGAC_26575 aroC chorismate synthase 0.91 14
Escherichia coli ECRC102 0.50 NIAGMN_14885 aroB 3-dehydroquinate synthase 0.62 NIAGMN_20390 aroC chorismate synthase — —
Escherichia coli BW25113 0.50 b3389 aroB 3-dehydroquinate synthase (NCBI) 0.62 b2329 aroC chorismate synthase (NCBI) 0.93 8
Vibrio cholerae E7946 ATCC 55056 0.50 CSW01_13300 3-dehydroquinate synthase 0.64 CSW01_10560 chorismate synthase low > 62
Klebsiella michiganensis M5al 0.49 BWI76_RS26085 3-dehydroquinate synthase 0.61 BWI76_RS20435 chorismate synthase 0.70 3
Serratia liquefaciens MT49 0.49 IAI46_23700 3-dehydroquinate synthase 0.63 IAI46_18025 chorismate synthase 0.64 37
Dickeya dadantii 3937 0.49 DDA3937_RS19545 3-dehydroquinate synthase 0.62 DDA3937_RS14580 chorismate synthase — —
Enterobacter sp. TBS_079 0.49 MPMX20_04278 3-dehydroquinate synthase 0.61 MPMX20_03264 Chorismate synthase 0.83 24
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.48 GFF630 3-dehydroquinate synthase (EC 4.2.3.4) 0.63 GFF1950 Chorismate synthase (EC 4.2.3.5) low > 78
Pectobacterium carotovorum WPP14 0.48 HER17_RS01780 3-dehydroquinate synthase 0.63 HER17_RS06935 chorismate synthase 0.81 49
Dickeya dianthicola ME23 0.48 DZA65_RS20760 3-dehydroquinate synthase 0.63 DZA65_RS15465 chorismate synthase — —
Dickeya dianthicola 67-19 0.48 HGI48_RS19675 3-dehydroquinate synthase 0.63 HGI48_RS14530 chorismate synthase — —
Enterobacter asburiae PDN3 0.48 EX28DRAFT_4153 3-dehydroquinate synthase (EC 4.2.3.4) 0.61 EX28DRAFT_0275 chorismate synthase (EC 4.2.3.5) — —
Erwinia tracheiphila SCR3 0.48 LU632_RS22865 aroB 3-dehydroquinate synthase 0.65 LU632_RS07775 aroC chorismate synthase 0.68 10
Kangiella aquimarina DSM 16071 0.44 B158DRAFT_0764 3-dehydroquinate synthase (EC 4.2.3.4) 0.47 B158DRAFT_2433 chorismate synthase (EC 4.2.3.5) 0.82 3
Rhodospirillum rubrum S1H 0.43 Rru_A3741 3-dehydroquinate synthase (NCBI) 0.56 Rru_A2623 Chorismate synthase (NCBI) — —
Lysobacter sp. OAE881 0.42 ABIE51_RS16100 3-dehydroquinate synthase 0.65 ABIE51_RS08220 chorismate synthase — —
Rhodanobacter denitrificans FW104-10B01 0.41 LRK54_RS04310 3-dehydroquinate synthase 0.66 LRK54_RS01725 chorismate synthase — —
Rhodanobacter sp. FW510-T8 0.41 OKGIIK_11185 aroB 3-dehydroquinate synthase 0.67 OKGIIK_04805 aroC chorismate synthase — —
Rhodanobacter denitrificans MT42 0.41 LRK55_RS04085 3-dehydroquinate synthase 0.66 LRK55_RS01505 chorismate synthase — —
Caulobacter crescentus NA1000 Δfur 0.40 CCNA_03104 3-dehydroquinate synthase 0.47 CCNA_03256 chorismate synthase low > 67
Caulobacter crescentus NA1000 0.40 CCNA_03104 3-dehydroquinate synthase 0.47 CCNA_03256 chorismate synthase low > 66
Magnetospirillum magneticum AMB-1 0.40 AMB_RS19865 3-dehydroquinate synthase 0.57 AMB_RS08025 chorismate synthase — —
Synechococcus elongatus PCC 7942 0.40 Synpcc7942_0525 aroB 3-dehydroquinate synthase 0.45 Synpcc7942_0212 aroC chorismate synthase — —
Azospirillum sp. SherDot2 0.39 MPMX19_02639 3-dehydroquinate synthase 0.56 MPMX19_01810 Chorismate synthase — —
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS10480 3-dehydroquinate synthase 0.70 ABZR86_RS08040 chorismate synthase 0.89 1
Brevundimonas sp. GW460-12-10-14-LB2 0.38 A4249_RS04175 3-dehydroquinate synthase 0.50 A4249_RS08790 chorismate synthase — —
Xanthomonas campestris pv. campestris strain 8004 0.38 Xcc-8004.1615.1 3-dehydroquinate synthase (EC 4.2.3.4) 0.67 Xcc-8004.1955.1 Chorismate synthase (EC 4.2.3.5) 0.66 6
Azospirillum brasilense Sp245 0.38 AZOBR_RS03220 3-dehydroquinate synthase 0.58 AZOBR_RS10730 chorismate synthase — —
Rhizobium sp. OAE497 0.38 ABIE40_RS17670 3-dehydroquinate synthase 0.50 ABIE40_RS03980 chorismate synthase — —
Sinorhizobium meliloti 1021 0.38 SMc00696 3-dehydroquinate synthase 0.50 SMc00007 chorismate synthase — —
Phaeobacter inhibens DSM 17395 0.37 PGA1_c14100 3-dehydroquinate synthase AroB 0.53 PGA1_c34060 chorismate synthase AroC — —
Rhodopseudomonas palustris CGA009 0.37 TX73_002610 3-dehydroquinate synthase 0.54 TX73_006170 chorismate synthase — —
Agrobacterium fabrum C58 0.36 Atu3625 3-dehydroquinate synthase 0.48 Atu0754 chorismate synthase — —
Dinoroseobacter shibae DFL-12 0.36 Dshi_1608 3-dehydroquinate synthase (RefSeq) 0.54 Dshi_3275 Chorismate synthase (RefSeq) — —
Sphingomonas koreensis DSMZ 15582 0.35 Ga0059261_3591 3-dehydroquinate synthase (EC 4.2.3.4) 0.48 Ga0059261_2470 chorismate synthase (EC 4.2.3.5) — —
Mycobacterium tuberculosis H37Rv 0.30 Rv2538c 3-dehydroquinate synthase AroB 0.25 Rv2540c Probable chorismate synthase AroF (5-enolpyruvylshikimate-3-phosphate phospholyase) — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.27 ABZR88_RS05215 3-dehydroquinate synthase 0.43 ABZR88_RS06995 chorismate synthase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.24 CA264_13105 3-dehydroquinate synthase 0.43 CA264_19835 chorismate synthase — —
Bacteroides stercoris CC31F 0.24 HMPREF1181_RS09265 3-dehydroquinate synthase 0.39 HMPREF1181_RS08365 chorismate synthase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.23 Echvi_0121 3-dehydroquinate synthase 0.47 Echvi_1518 chorismate synthase — —
Parabacteroides merdae CL09T00C40 0.22 HMPREF1078_RS04395 3-dehydroquinate synthase 0.43 HMPREF1078_RS16710 chorismate synthase — —

Not shown: 1 genomes with orthologs for BPHYT_RS17885 only; 13 genomes with orthologs for BPHYT_RS13705 only