Conservation of cofitness between BPHYT_RS06610 and BPHYT_RS08960 in Burkholderia phytofirmans PsJN

86 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS06610 triosephosphate isomerase 1.0 BPHYT_RS08960 threonine synthase 0.76 13
Paraburkholderia graminis OAS925 0.88 ABIE53_001588 triosephosphate isomerase 0.96 ABIE53_002027 threonine synthase — —
Paraburkholderia bryophila 376MFSha3.1 0.87 H281DRAFT_04564 triosephosphate isomerase 0.96 H281DRAFT_00811 L-threonine synthase — —
Paraburkholderia sabiae LMG 24235 0.80 QEN71_RS24165 triose-phosphate isomerase 0.92 QEN71_RS22400 threonine synthase 0.60 91
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS05495 triosephosphate isomerase 0.76 RR42_RS12535 threonine synthase — —
Ralstonia sp. UNC404CL21Col 0.60 ABZR87_RS14895 triose-phosphate isomerase 0.76 ABZR87_RS11450 threonine synthase — —
Ralstonia solanacearum GMI1000 0.59 RS_RS10360 triose-phosphate isomerase 0.76 RS_RS06660 threonine synthase — —
Ralstonia solanacearum PSI07 0.59 RPSI07_RS14320 triose-phosphate isomerase 0.75 RPSI07_RS17485 threonine synthase — —
Ralstonia solanacearum UW163 0.59 UW163_RS10735 triose-phosphate isomerase 0.75 UW163_RS13325 threonine synthase — —
Ralstonia solanacearum IBSBF1503 0.59 RALBFv3_RS02990 triose-phosphate isomerase 0.75 RALBFv3_RS15880 threonine synthase — —
Acidovorax sp. GW101-3H11 0.51 Ac3H11_1454 Triosephosphate isomerase (EC 5.3.1.1) 0.64 Ac3H11_1505 Threonine synthase (EC 4.2.3.1) — —
Castellaniella sp019104865 MT123 0.51 ABCV34_RS01320 triose-phosphate isomerase 0.53 ABCV34_RS02300 threonine synthase — —
Xanthomonas campestris pv. campestris strain 8004 0.49 Xcc-8004.1979.1 Triosephosphate isomerase (EC 5.3.1.1) 0.17 Xcc-8004.2954.1 Threonine synthase (EC 4.2.3.1) — —
Variovorax sp. SCN45 0.49 GFF4748 Triosephosphate isomerase (EC 5.3.1.1) 0.64 GFF2800 Threonine synthase (EC 4.2.3.1) — —
Dechlorosoma suillum PS 0.49 Dsui_3052 triosephosphate isomerase 0.66 Dsui_2904 threonine synthase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.48 GFF3679 Triosephosphate isomerase (EC 5.3.1.1) 0.63 GFF3936 Threonine synthase (EC 4.2.3.1) — —
Dyella japonica UNC79MFTsu3.2 0.46 ABZR86_RS01940 triose-phosphate isomerase 0.16 ABZR86_RS15975 threonine synthase (EC 4.2.3.1) (from data) — —
Alteromonas macleodii MIT1002 0.46 MIT1002_01868 Triosephosphate isomerase 0.17 MIT1002_03084 Threonine synthase — —
Rahnella sp. WP5 0.46 EX31_RS14300 triose-phosphate isomerase 0.20 EX31_RS03935 threonine synthase — —
Herbaspirillum seropedicae SmR1 0.45 HSERO_RS08805 triosephosphate isomerase 0.72 HSERO_RS10470 threonine synthase — —
Dickeya dianthicola ME23 0.45 DZA65_RS21555 triose-phosphate isomerase 0.17 DZA65_RS19475 threonine synthase — —
Variovorax sp. OAS795 0.45 ABID97_RS20510 triose-phosphate isomerase 0.65 ABID97_RS25760 threonine synthase — —
Dickeya dianthicola 67-19 0.45 HGI48_RS20510 triose-phosphate isomerase 0.18 HGI48_RS18335 threonine synthase — —
Dickeya dadantii 3937 0.45 DDA3937_RS00865 triose-phosphate isomerase 0.18 DDA3937_RS18405 threonine synthase low > 74
Echinicola vietnamensis KMM 6221, DSM 17526 0.44 Echvi_1196 triosephosphate isomerase 0.19 Echvi_2002 threonine synthase 0.61 14
Bacteroides ovatus ATCC 8483 0.44 BACOVA_01155 triose-phosphate isomerase 0.20 BACOVA_03023 threonine synthase — —
Bacteroides thetaiotaomicron VPI-5482 0.44 BT3929 triosephosphate isomerase (NCBI ptt file) 0.20 BT2401 threonine synthase (NCBI ptt file) — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.44 ABZR88_RS14455 triose-phosphate isomerase 0.19 ABZR88_RS18960 threonine synthase — —
Pectobacterium carotovorum WPP14 0.44 HER17_RS00800 triose-phosphate isomerase 0.18 HER17_RS02805 threonine synthase — —
Marinobacter adhaerens HP15 0.43 HP15_3071 triosephosphate isomerase 0.33 HP15_765 threonine synthase — —
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_05590 triosephosphate isomerase 0.35 AO353_04350 threonine synthase — —
Bacteroides stercoris CC31F 0.43 HMPREF1181_RS06595 triose-phosphate isomerase 0.21 HMPREF1181_RS00050 threonine synthase — —
Phocaeicola vulgatus CL09T03C04 0.43 HMPREF1058_RS08270 triose-phosphate isomerase 0.20 HMPREF1058_RS14730 threonine synthase — —
Erwinia tracheiphila SCR3 0.43 LU632_RS19730 tpiA triose-phosphate isomerase 0.19 LU632_RS02620 thrC threonine synthase — —
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_1164 Triosephosphate isomerase (EC 5.3.1.1) 0.35 Pf1N1B4_3014 Threonine synthase (EC 4.2.3.1) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_4184 triosephosphate isomerase 0.34 Psyr_1291 L-threonine synthase — —
Pseudomonas fluorescens FW300-N2E2 0.42 Pf6N2E2_3356 Triosephosphate isomerase (EC 5.3.1.1) 0.35 Pf6N2E2_3142 Threonine synthase (EC 4.2.3.1) — —
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_4184 triosephosphate isomerase 0.34 Psyr_1291 L-threonine synthase — —
Pantoea sp. MT58 0.42 IAI47_00795 triose-phosphate isomerase 0.18 IAI47_16205 threonine synthase — —
Pedobacter sp. GW460-11-11-14-LB5 0.42 CA265_RS10795 triose-phosphate isomerase 0.20 CA265_RS23465 threonine synthase — —
Pseudomonas fluorescens FW300-N2C3 0.42 AO356_07440 triosephosphate isomerase 0.35 AO356_06370 threonine synthase — —
Serratia liquefaciens MT49 0.42 IAI46_24635 triose-phosphate isomerase 0.19 IAI46_03040 threonine synthase — —
Pseudomonas sp. RS175 0.42 PFR28_00085 Triosephosphate isomerase 0.35 PFR28_00334 Threonine synthase — —
Parabacteroides merdae CL09T00C40 0.42 HMPREF1078_RS12745 triose-phosphate isomerase 0.20 HMPREF1078_RS10395 threonine synthase — —
Enterobacter asburiae PDN3 0.42 EX28DRAFT_4394 triosephosphate isomerase (EC 5.3.1.1) 0.18 EX28DRAFT_3616 threonine synthase — —
Pseudomonas putida KT2440 0.42 PP_4715 triose phosphate isomerase 0.34 PP_1471 Threonine synthase — —
Enterobacter sp. TBS_079 0.42 MPMX20_04548 Triosephosphate isomerase 0.18 MPMX20_00712 Threonine synthase — —
Escherichia coli ECRC100 0.41 OKFHMN_13810 tpiA triose-phosphate isomerase 0.18 OKFHMN_11100 thrC threonine synthase — —
Pseudomonas fluorescens GW456-L13 0.41 PfGW456L13_5091 Triosephosphate isomerase (EC 5.3.1.1) 0.34 PfGW456L13_1724 Threonine synthase (EC 4.2.3.1) — —
Escherichia coli Nissle 1917 0.41 ECOLIN_RS22575 triose-phosphate isomerase 0.18 ECOLIN_RS00020 threonine synthase low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.41 OHPLBJKB_04132 Triosephosphate isomerase 0.18 OHPLBJKB_03656 Threonine synthase — —
Escherichia coli BL21 0.41 ECD_03804 triosephosphate isomerase 0.18 ECD_00004 L-threonine synthase — —
Escherichia fergusonii Becca 0.41 EFB2_04699 Triosephosphate isomerase 0.18 EFB2_04039 Threonine synthase — —
Escherichia coli ECOR38 0.41 HEPCGN_12455 tpiA triose-phosphate isomerase 0.18 HEPCGN_09105 thrC threonine synthase — —
Escherichia coli ECRC99 0.41 KEDOAH_14350 tpiA triose-phosphate isomerase 0.18 KEDOAH_17055 thrC threonine synthase — —
Escherichia coli ECRC62 0.41 BNILDI_05585 tpiA triose-phosphate isomerase 0.18 BNILDI_08170 thrC threonine synthase — —
Escherichia coli BW25113 0.41 b3919 tpiA triosephosphate isomerase (NCBI) 0.18 b0004 thrC threonine synthase (NCBI) — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.41 GFF2302 Triosephosphate isomerase (EC 5.3.1.1) 0.18 GFF1080 Threonine synthase (EC 4.2.3.1) — —
Escherichia coli ECOR27 0.41 NOLOHH_05945 tpiA triose-phosphate isomerase 0.18 NOLOHH_03430 thrC threonine synthase — —
Escherichia coli ECRC98 0.41 JDDGAC_17435 tpiA triose-phosphate isomerase 0.18 JDDGAC_14695 thrC threonine synthase — —
Escherichia coli ECRC102 0.41 NIAGMN_11565 tpiA triose-phosphate isomerase 0.18 NIAGMN_08950 thrC threonine synthase — —
Escherichia coli ECRC101 0.41 MCAODC_04310 tpiA triose-phosphate isomerase 0.18 MCAODC_01615 thrC threonine synthase — —
Shewanella oneidensis MR-1 0.41 SO1200 tpiA triosephosphate isomerase (NCBI ptt file) 0.15 SO3413 thrC threonine synthase (NCBI ptt file) — —
Shewanella sp. ANA-3 0.41 Shewana3_1026 triosephosphate isomerase (RefSeq) 0.16 Shewana3_1141 threonine synthase (RefSeq) — —
Pseudomonas sp. S08-1 0.41 OH686_17115 triose-phosphate isomerase 0.33 OH686_17765 threonine synthase — —
Pseudomonas fluorescens SBW25 0.41 PFLU_RS25840 triose-phosphate isomerase 0.34 PFLU_RS24545 threonine synthase — —
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS25840 triose-phosphate isomerase 0.34 PFLU_RS24545 threonine synthase — —
Pseudomonas simiae WCS417 0.41 PS417_24000 triosephosphate isomerase 0.34 PS417_22880 threonine synthase — —
Lysobacter sp. OAE881 0.40 ABIE51_RS08295 triose-phosphate isomerase 0.18 ABIE51_RS17530 threonine synthase — —
Klebsiella michiganensis M5al 0.40 BWI76_RS27465 triose-phosphate isomerase 0.19 BWI76_RS04255 threonine synthase — —
Shewanella loihica PV-4 0.40 Shew_2831 Triose-phosphate isomerase (RefSeq) 0.17 Shew_1081 threonine synthase (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.39 CSW01_13490 triose-phosphate isomerase 0.19 CSW01_11965 threonine synthase — —
Pseudomonas stutzeri RCH2 0.38 Psest_0975 triosephosphate isomerase 0.33 Psest_3125 threonine synthase — —
Sinorhizobium meliloti 1021 0.37 SMc01023 triosephosphate isomerase 0.35 SMc00077 threonine synthase — —
Magnetospirillum magneticum AMB-1 0.37 AMB_RS09205 triose-phosphate isomerase 0.32 AMB_RS17140 threonine synthase — —
Rhodopseudomonas palustris CGA009 0.37 TX73_014970 triose-phosphate isomerase 0.31 TX73_004325 threonine synthase — —
Phaeobacter inhibens DSM 17395 0.37 PGA1_c20650 triosephosphate isomerase TpiA 0.32 PGA1_c06310 threonine synthase ThrC — —
Brevundimonas sp. GW460-12-10-14-LB2 0.37 A4249_RS06145 triose-phosphate isomerase 0.25 A4249_RS00020 threonine synthase — —
Rhizobium sp. OAE497 0.35 ABIE40_RS09645 triose-phosphate isomerase 0.35 ABIE40_RS04230 threonine synthase — —
Azospirillum sp. SherDot2 0.35 MPMX19_01241 Triosephosphate isomerase 0.35 MPMX19_00671 Threonine synthase — —
Agrobacterium fabrum C58 0.35 Atu1620 triosephosphate isomerase 0.35 Atu0787 threonine synthase — —
Rhodospirillum rubrum S1H 0.35 Rru_A1889 Triosephosphate isomerase (NCBI) 0.32 Rru_A3233 Threonine synthase (NCBI) — —
Bifidobacterium breve UCC2003 0.34 BBR_RS15540 triose-phosphate isomerase 0.22 BBR_RS14070 threonine synthase — —
Caulobacter crescentus NA1000 0.33 CCNA_01970 triosephosphate isomerase 0.32 CCNA_03510 threonine synthase — —
Caulobacter crescentus NA1000 Δfur 0.33 CCNA_01970 triosephosphate isomerase 0.32 CCNA_03510 threonine synthase — —
Dinoroseobacter shibae DFL-12 0.33 Dshi_2078 Triose-phosphate isomerase (RefSeq) 0.36 Dshi_1146 threonine synthase (RefSeq) — —
Sphingomonas koreensis DSMZ 15582 0.32 Ga0059261_0254 triosephosphate isomerase (EC 5.3.1.1) 0.33 Ga0059261_1999 threonine synthase — —

Not shown: 12 genomes with orthologs for BPHYT_RS06610 only; 3 genomes with orthologs for BPHYT_RS08960 only