Conservation of cofitness between Atu0817 and Atu2791 in Agrobacterium fabrum C58

92 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu0817 sulfate adenylate transferase, subunit 2 1.0 Atu2791 3-isopropylmalate dehydrogenase 0.55 7
Sinorhizobium meliloti 1021 0.86 SMc00091 sulfate adenylyltransferase 0.90 SMc04405 3-isopropylmalate dehydrogenase 0.92 12
Rhizobium sp. OAE497 0.85 ABIE40_RS04470 sulfate adenylyltransferase subunit CysD 0.89 ABIE40_RS19050 3-isopropylmalate dehydrogenase 0.83 20
Shewanella loihica PV-4 0.68 Shew_1422 sulfate adenylyltransferase subunit 2 (RefSeq) 0.38 Shew_3471 3-isopropylmalate dehydrogenase (RefSeq) 0.75 23
Vibrio cholerae E7946 ATCC 55056 0.68 CSW01_12960 sulfate adenylyltransferase subunit CysD 0.43 CSW01_12600 3-isopropylmalate dehydrogenase low > 62
Marinobacter adhaerens HP15 0.67 HP15_2462 sulfate adenylyltransferase, small subunit 0.54 HP15_1832 3-isopropylmalate dehydrogenase 0.87 17
Dickeya dianthicola ME23 0.67 DZA65_RS18070 sulfate adenylyltransferase subunit CysD 0.43 DZA65_RS19205 3-isopropylmalate dehydrogenase 0.71 48
Dickeya dianthicola 67-19 0.67 HGI48_RS16995 sulfate adenylyltransferase subunit CysD 0.43 HGI48_RS18060 3-isopropylmalate dehydrogenase 0.75 41
Dickeya dadantii 3937 0.67 DDA3937_RS16925 sulfate adenylyltransferase subunit CysD 0.42 DDA3937_RS18120 3-isopropylmalate dehydrogenase low > 74
Shewanella sp. ANA-3 0.67 Shewana3_0863 sulfate adenylyltransferase subunit 2 (RefSeq) 0.39 Shewana3_3760 3-isopropylmalate dehydrogenase (RefSeq) 0.86 49
Enterobacter sp. TBS_079 0.67 MPMX20_03638 Sulfate adenylyltransferase subunit 2 0.44 MPMX20_00768 3-isopropylmalate dehydrogenase 0.59 13
Pseudomonas sp. S08-1 0.67 OH686_08450 Sulfate adenylyltransferase subunit 2 0.53 OH686_04470 3-isopropylmalate dehydrogenase
Enterobacter asburiae PDN3 0.67 EX28DRAFT_2848 sulfate adenylyltransferase, small subunit 0.44 EX28DRAFT_3669 3-isopropylmalate dehydrogenase 0.79 31
Kangiella aquimarina DSM 16071 0.66 B158DRAFT_2360 sulfate adenylyltransferase, small subunit 0.53 B158DRAFT_1322 3-isopropylmalate dehydrogenase (EC 1.1.1.85) low > 40
Klebsiella michiganensis M5al 0.66 BWI76_RS22700 sulfate adenylyltransferase subunit 2 0.44 BWI76_RS04675 3-isopropylmalate dehydrogenase 0.56 46
Shewanella oneidensis MR-1 0.66 SO3727 cysD sulfate adenylyltransferase, subunit 2 (NCBI ptt file) 0.39 SO4235 leuB 3-isopropylmalate dehydrogenase (NCBI ptt file) 0.97 6
Acinetobacter radioresistens SK82 0.66 MPMX26_02326 Sulfate adenylyltransferase subunit 2 0.54 MPMX26_00348 3-isopropylmalate dehydrogenase 0.82 17
Rahnella sp. WP5 0.66 EX31_RS07880 sulfate adenylyltransferase subunit CysD 0.42 EX31_RS03685 3-isopropylmalate dehydrogenase 0.93 27
Escherichia coli HS(pFamp)R (ATCC 700891) 0.66 OHPLBJKB_00981 Sulfate adenylyltransferase subunit 2 0.44 OHPLBJKB_03584 3-isopropylmalate dehydrogenase low > 73
Pectobacterium carotovorum WPP14 0.66 HER17_RS04285 sulfate adenylyltransferase subunit CysD 0.43 HER17_RS03080 3-isopropylmalate dehydrogenase 0.84 69
Escherichia coli BW25113 0.66 b2752 cysD sulfate adenylyltransferase subunit 2 (NCBI) 0.44 b0073 leuB 3-isopropylmalate dehydrogenase (VIMSS) 0.87 17
Escherichia fergusonii Becca 0.66 EFB2_01158 Sulfate adenylyltransferase subunit 2 0.44 EFB2_03972 3-isopropylmalate dehydrogenase low > 86
Escherichia coli ECRC99 0.66 KEDOAH_07700 cysD sulfate adenylyltransferase subunit CysD 0.44 KEDOAH_17435 leuB 3-isopropylmalate dehydrogenase
Escherichia coli ECOR27 0.66 NOLOHH_12255 cysD sulfate adenylyltransferase subunit CysD 0.44 NOLOHH_03065 leuA 2-isopropylmalate synthase low > 57
Escherichia coli ECOR38 0.66 HEPCGN_19620 cysD sulfate adenylyltransferase subunit CysD 0.44 HEPCGN_08700 leuB 3-isopropylmalate dehydrogenase low > 85
Escherichia coli ECRC62 0.66 BNILDI_10805 cysD sulfate adenylyltransferase subunit CysD 0.44 BNILDI_08545 leuA 2-isopropylmalate synthase
Escherichia coli ECRC102 0.66 NIAGMN_18210 cysD sulfate adenylyltransferase subunit CysD 0.44 NIAGMN_08570 leuB 3-isopropylmalate dehydrogenase
Escherichia coli BL21 0.66 ECD_02602 sulfate adenylyltransferase, subunit 2 0.44 ECD_00075 3-isopropylmalate dehydrogenase, NAD(+)-dependent low > 60
Escherichia coli ECRC101 0.66 OKFHMN_20440 cysD sulfate adenylyltransferase subunit CysD 0.44 OKFHMN_10720 leuB 3-isopropylmalate dehydrogenase
Escherichia coli ECRC98 0.66 JDDGAC_24105 cysD sulfate adenylyltransferase subunit CysD 0.44 JDDGAC_14315 leuB 3-isopropylmalate dehydrogenase
Escherichia coli ECRC101 0.66 MCAODC_10965 cysD sulfate adenylyltransferase subunit CysD 0.44 MCAODC_01235 leuB 3-isopropylmalate dehydrogenase
Serratia liquefaciens MT49 0.66 IAI46_03715 sulfate adenylyltransferase subunit CysD 0.43 IAI46_03350 3-isopropylmalate dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_4128 sulfate adenylyltransferase subunit 2 0.55 Psyr_1985 3-isopropylmalate dehydrogenase 0.84 15
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_4128 sulfate adenylyltransferase subunit 2 0.55 Psyr_1985 3-isopropylmalate dehydrogenase 0.76 28
Pseudomonas fluorescens FW300-N2E3 0.66 AO353_05080 sulfate adenylyltransferase 0.55 AO353_20635 3-isopropylmalate dehydrogenase 0.70 9
Pseudomonas fluorescens GW456-L13 0.66 PfGW456L13_4993 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.54 PfGW456L13_3945 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.74 18
Pantoea sp. MT58 0.66 IAI47_04180 sulfate adenylyltransferase subunit CysD 0.41 IAI47_16005 3-isopropylmalate dehydrogenase 0.79 12
Escherichia coli Nissle 1917 0.66 ECOLIN_RS15385 sulfate adenylyltransferase subunit CysD 0.44 ECOLIN_RS00395 3-isopropylmalate dehydrogenase low > 52
Pseudomonas putida KT2440 0.66 PP_1303 Sulfate adenylyltransferase subunit 2 0.55 PP_1988 3-isopropylmalate dehydrogenase 0.51 13
Pseudomonas simiae WCS417 0.65 PS417_03715 sulfate adenylyltransferase subunit 2 0.57 PS417_18585 3-isopropylmalate dehydrogenase
Pseudomonas fluorescens FW300-N2E2 0.65 Pf6N2E2_5257 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.56 Pf6N2E2_66 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.47 29
Pseudomonas fluorescens SBW25 0.65 PFLU_RS03765 sulfate adenylyltransferase subunit CysD 0.57 PFLU_RS20565 3-isopropylmalate dehydrogenase low > 109
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF4800 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.44 GFF165 3-isopropylmalate dehydrogenase (EC 1.1.1.85) low > 78
Pseudomonas fluorescens SBW25-INTG 0.65 PFLU_RS03765 sulfate adenylyltransferase subunit CysD 0.57 PFLU_RS20565 3-isopropylmalate dehydrogenase low > 109
Pseudomonas fluorescens FW300-N2C3 0.65 AO356_16665 sulfate adenylyltransferase 0.56 AO356_21415 3-isopropylmalate dehydrogenase 0.67 13
Pseudomonas sp. RS175 0.65 PFR28_00193 Sulfate adenylyltransferase subunit 2 0.56 PFR28_02821 3-isopropylmalate dehydrogenase low > 88
Shewanella amazonensis SB2B 0.64 Sama_2891 sulfate adenylyltransferase subunit 2 (RefSeq) 0.38 Sama_0336 3-isopropylmalate dehydrogenase (RefSeq) 0.94 21
Alteromonas macleodii MIT1002 0.64 MIT1002_01274 Sulfate adenylyltransferase subunit 2 0.39 MIT1002_00948 3-isopropylmalate dehydrogenase
Pseudomonas fluorescens FW300-N1B4 0.64 Pf1N1B4_1058 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.56 Pf1N1B4_12 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
Azospirillum sp. SherDot2 0.64 MPMX19_06719 Sulfate adenylyltransferase subunit 2 0.64 MPMX19_00607 3-isopropylmalate dehydrogenase low > 112
Erwinia tracheiphila SCR3 0.64 LU632_RS06425 cysD sulfate adenylyltransferase subunit CysD 0.41 LU632_RS02875 leuB 3-isopropylmalate dehydrogenase low > 74
Pseudomonas stutzeri RCH2 0.63 Psest_3294 sulfate adenylyltransferase, small subunit 0.54 Psest_2589 3-isopropylmalate dehydrogenase
Caulobacter crescentus NA1000 0.62 CCNA_01550 sulfate adenylyltransferase subunit 2 0.56 CCNA_00193 3-isopropylmalate dehydrogenase 0.90 28
Caulobacter crescentus NA1000 Δfur 0.62 CCNA_01550 sulfate adenylyltransferase subunit 2 0.56 CCNA_00193 3-isopropylmalate dehydrogenase low > 67
Rhodospirillum rubrum S1H 0.62 Rru_A2289 Sulfate adenylyltransferase, small subunit (NCBI) 0.57 Rru_A1191 3-isopropylmalate dehydrogenase (NCBI)
Brevundimonas sp. GW460-12-10-14-LB2 0.62 A4249_RS15305 sulfate adenylyltransferase subunit CysD 0.40 A4249_RS09995 3-isopropylmalate dehydrogenase 0.99 19
Bacteroides ovatus ATCC 8483 0.61 BACOVA_01768 putative sulfate adenylyltransferase subunit 2 0.32 BACOVA_04600 3-isopropylmalate dehydrogenase low > 94
Xanthomonas campestris pv. campestris strain 8004 0.61 Xcc-8004.1259.1 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.52 Xcc-8004.1053.1 3-isopropylmalate dehydrogenase (EC 1.1.1.85) low > 74
Bacteroides thetaiotaomicron VPI-5482 0.61 BT0414 sulfate adenylyltransferase subunit 2 (NCBI ptt file) 0.32 BT1857 3-isopropylmalate dehydrogenase (NCBI ptt file) low > 81
Lysobacter sp. OAE881 0.61 ABIE51_RS15820 sulfate adenylyltransferase subunit CysD 0.39 ABIE51_RS17585 3-isopropylmalate dehydrogenase 0.97 23
Parabacteroides merdae CL09T00C40 0.61 HMPREF1078_RS01705 sulfate adenylyltransferase subunit CysD 0.33 HMPREF1078_RS16640 3-isopropylmalate dehydrogenase low > 61
Bacteroides stercoris CC31F 0.61 HMPREF1181_RS04305 sulfate adenylyltransferase subunit CysD 0.33 HMPREF1181_RS14125 3-isopropylmalate dehydrogenase low > 56
Phocaeicola vulgatus CL09T03C04 0.60 HMPREF1058_RS02945 sulfate adenylyltransferase subunit CysD 0.33 HMPREF1058_RS14565 3-isopropylmalate dehydrogenase low > 67
Rhodanobacter sp. FW510-T8 0.60 OKGIIK_01295 cysD sulfate adenylyltransferase subunit CysD 0.39 OKGIIK_13595 leuB 3-isopropylmalate dehydrogenase low > 52
Rhodanobacter denitrificans FW104-10B01 0.60 LRK54_RS05520 sulfate adenylyltransferase subunit CysD 0.37 LRK54_RS10325 3-isopropylmalate dehydrogenase low > 59
Phocaeicola dorei CL03T12C01 0.60 ABI39_RS02260 sulfate adenylyltransferase subunit CysD 0.33 ABI39_RS10215 3-isopropylmalate dehydrogenase low > 72
Rhodanobacter denitrificans MT42 0.60 LRK55_RS05290 sulfate adenylyltransferase subunit CysD 0.37 LRK55_RS09965 3-isopropylmalate dehydrogenase
Bosea sp. OAE506 0.59 ABIE41_RS15370 sulfate adenylyltransferase subunit CysD 0.69 ABIE41_RS11860 3-isopropylmalate dehydrogenase
Azospirillum brasilense Sp245 0.59 AZOBR_RS33775 sulfate adenylyltransferase subunit 2 0.63 AZOBR_RS14130 3-isopropylmalate dehydrogenase low > 97
Dyella japonica UNC79MFTsu3.2 0.57 ABZR86_RS18865 sulfate adenylyltransferase subunit CysD 0.35 ABZR86_RS15950 3-isopropylmalate dehydrogenase low > 74
Sphingomonas koreensis DSMZ 15582 0.55 Ga0059261_4076 sulfate adenylyltransferase, small subunit 0.43 Ga0059261_3190 3-isopropylmalate dehydrogenase low > 68
Castellaniella sp019104865 MT123 0.41 ABCV34_RS14115 sulfate adenylyltransferase subunit CysD 0.46 ABCV34_RS04280 3-isopropylmalate dehydrogenase low > 48
Echinicola vietnamensis KMM 6221, DSM 17526 0.41 Echvi_0983 sulfate adenylyltransferase, small subunit 0.38 Echvi_2062 3-isopropylmalate dehydrogenase
Pedobacter sp. GW460-11-11-14-LB5 0.40 CA265_RS04115 sulfate adenylyltransferase 0.40 CA265_RS15850 3-isopropylmalate dehydrogenase 0.93 19
Dechlorosoma suillum PS 0.40 Dsui_1983 sulfate adenylyltransferase, small subunit 0.52 Dsui_3198 3-isopropylmalate dehydrogenase
Herbaspirillum seropedicae SmR1 0.39 HSERO_RS15565 sulfate adenylyltransferase subunit 2 0.48 HSERO_RS16500 3-isopropylmalate dehydrogenase 0.89 10
Mucilaginibacter yixingensis YX-36 DSM 26809 0.38 ABZR88_RS04940 sulfate adenylyltransferase subunit CysD 0.41 ABZR88_RS11605 3-isopropylmalate dehydrogenase
Pontibacter actiniarum KMM 6156, DSM 19842 0.37 CA264_02545 sulfate adenylyltransferase small subunit 0.35 CA264_09445 3-isopropylmalate dehydrogenase low > 74
Hydrogenophaga sp. GW460-11-11-14-LB1 0.37 GFF4290 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.48 GFF3360 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.83 13
Ralstonia sp. UNC404CL21Col 0.37 ABZR87_RS00195 sulfate adenylyltransferase subunit CysD 0.48 ABZR87_RS14530 3-isopropylmalate dehydrogenase 0.75 13
Ralstonia solanacearum IBSBF1503 0.37 RALBFv3_RS04585 sulfate adenylyltransferase subunit CysD 0.48 RALBFv3_RS02610 3-isopropylmalate dehydrogenase
Ralstonia solanacearum UW163 0.37 UW163_RS09085 sulfate adenylyltransferase subunit CysD 0.48 UW163_RS11115 3-isopropylmalate dehydrogenase
Ralstonia solanacearum GMI1000 0.36 RS_RS12155 sulfate adenylyltransferase subunit CysD 0.48 RS_RS09990 3-isopropylmalate dehydrogenase low > 80
Ralstonia solanacearum PSI07 0.36 RPSI07_RS12790 sulfate adenylyltransferase subunit CysD 0.48 RPSI07_RS14705 3-isopropylmalate dehydrogenase 0.43 51
Acidovorax sp. GW101-3H11 0.36 Ac3H11_574 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.47 Ac3H11_1528 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.86 6
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS16255 sulfate adenylyltransferase 0.48 RR42_RS14385 3-isopropylmalate dehydrogenase 0.84 21
Variovorax sp. OAS795 0.36 ABID97_RS15365 sulfate adenylyltransferase subunit CysD 0.48 ABID97_RS08455 3-isopropylmalate dehydrogenase
Variovorax sp. SCN45 0.36 GFF1203 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.48 GFF3888 3-isopropylmalate dehydrogenase (EC 1.1.1.85) low > 127
Paraburkholderia sabiae LMG 24235 0.35 QEN71_RS25240 sulfate adenylyltransferase subunit CysD 0.47 QEN71_RS17620 3-isopropylmalate dehydrogenase 0.77 54
Burkholderia phytofirmans PsJN 0.34 BPHYT_RS04740 sulfate adenylyltransferase subunit 2 0.47 BPHYT_RS33900 3-isopropylmalate dehydrogenase 0.79 5
Paraburkholderia bryophila 376MFSha3.1 0.34 H281DRAFT_00117 sulfate adenylyltransferase subunit 2 0.47 H281DRAFT_06072 3-isopropylmalate dehydrogenase 0.68 15
Magnetospirillum magneticum AMB-1 0.34 AMB_RS11195 sulfate adenylyltransferase subunit 2 0.55 AMB_RS20570 3-isopropylmalate dehydrogenase
Rhodopseudomonas palustris CGA009 0.31 TX73_003885 sulfate adenylyltransferase subunit 2 0.72 TX73_001175 3-isopropylmalate dehydrogenase

Not shown: 1 genomes with orthologs for Atu0817 only; 6 genomes with orthologs for Atu2791 only