Conservation of cofitness between Atu0817 and Atu2264 in Agrobacterium fabrum C58

85 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu0817 sulfate adenylate transferase, subunit 2 1.0 Atu2264 2-isopropylmalate synthase 0.55 5
Sinorhizobium meliloti 1021 0.86 SMc00091 sulfate adenylyltransferase 0.88 SMc02717 2-isopropylmalate synthase 0.92 14
Rhizobium sp. OAE497 0.85 ABIE40_RS04470 sulfate adenylyltransferase subunit CysD 0.87 ABIE40_RS13330 2-isopropylmalate synthase 0.84 16
Shewanella loihica PV-4 0.68 Shew_1422 sulfate adenylyltransferase subunit 2 (RefSeq) 0.09 Shew_3472 2-isopropylmalate synthase (RefSeq) 0.74 35
Vibrio cholerae E7946 ATCC 55056 0.68 CSW01_12960 sulfate adenylyltransferase subunit CysD 0.10 CSW01_12595 2-isopropylmalate synthase low > 62
Marinobacter adhaerens HP15 0.67 HP15_2462 sulfate adenylyltransferase, small subunit 0.48 HP15_2055 2-isopropylmalate synthase 0.68 57
Dickeya dianthicola ME23 0.67 DZA65_RS18070 sulfate adenylyltransferase subunit CysD 0.10 DZA65_RS19200 2-isopropylmalate synthase 0.78 29
Dickeya dianthicola 67-19 0.67 HGI48_RS16995 sulfate adenylyltransferase subunit CysD 0.09 HGI48_RS18055 2-isopropylmalate synthase 0.74 44
Dickeya dadantii 3937 0.67 DDA3937_RS16925 sulfate adenylyltransferase subunit CysD 0.45 DDA3937_RS02895 2-isopropylmalate synthase low > 74
Shewanella sp. ANA-3 0.67 Shewana3_0863 sulfate adenylyltransferase subunit 2 (RefSeq) 0.09 Shewana3_3761 2-isopropylmalate synthase (RefSeq) 0.88 33
Enterobacter asburiae PDN3 0.67 EX28DRAFT_2848 sulfate adenylyltransferase, small subunit 0.46 EX28DRAFT_2770 2-isopropylmalate synthase, yeast type low > 76
Enterobacter sp. TBS_079 0.67 MPMX20_03638 Sulfate adenylyltransferase subunit 2 0.46 MPMX20_03565 2-isopropylmalate synthase low > 85
Pseudomonas sp. S08-1 0.67 OH686_08450 Sulfate adenylyltransferase subunit 2 0.52 OH686_17570 2-isopropylmalate synthase
Klebsiella michiganensis M5al 0.66 BWI76_RS22700 sulfate adenylyltransferase subunit 2 0.46 BWI76_RS22105 2-isopropylmalate synthase low > 92
Shewanella oneidensis MR-1 0.66 SO3727 cysD sulfate adenylyltransferase, subunit 2 (NCBI ptt file) 0.09 SO4236 leuA 2-isopropylmalate synthase (NCBI ptt file) 0.96 9
Pectobacterium carotovorum WPP14 0.66 HER17_RS04285 sulfate adenylyltransferase subunit CysD 0.10 HER17_RS03085 2-isopropylmalate synthase 0.89 32
Escherichia coli HS(pFamp)R (ATCC 700891) 0.66 OHPLBJKB_00981 Sulfate adenylyltransferase subunit 2 0.09 OHPLBJKB_03583 2-isopropylmalate synthase low > 73
Acinetobacter radioresistens SK82 0.66 MPMX26_02326 Sulfate adenylyltransferase subunit 2 0.50 MPMX26_00404 2-isopropylmalate synthase low > 36
Rahnella sp. WP5 0.66 EX31_RS07880 sulfate adenylyltransferase subunit CysD 0.50 EX31_RS24130 2-isopropylmalate synthase low > 89
Escherichia coli ECRC98 0.66 JDDGAC_24105 cysD sulfate adenylyltransferase subunit CysD 0.09 JDDGAC_14310 2-isopropylmalate synthase
Escherichia coli ECRC101 0.66 OKFHMN_20440 cysD sulfate adenylyltransferase subunit CysD 0.09 OKFHMN_10715 2-isopropylmalate synthase
Escherichia coli BL21 0.66 ECD_02602 sulfate adenylyltransferase, subunit 2 0.09 ECD_00076 2-isopropylmalate synthase low > 60
Escherichia coli ECOR38 0.66 HEPCGN_19620 cysD sulfate adenylyltransferase subunit CysD 0.09 HEPCGN_08695 2-isopropylmalate synthase low > 85
Escherichia coli ECRC102 0.66 NIAGMN_18210 cysD sulfate adenylyltransferase subunit CysD 0.09 NIAGMN_08565 2-isopropylmalate synthase
Escherichia coli ECRC62 0.66 BNILDI_10805 cysD sulfate adenylyltransferase subunit CysD 0.09 BNILDI_08550 2-isopropylmalate synthase
Escherichia coli ECOR27 0.66 NOLOHH_12255 cysD sulfate adenylyltransferase subunit CysD 0.09 NOLOHH_03060 2-isopropylmalate synthase low > 57
Escherichia coli ECRC99 0.66 KEDOAH_07700 cysD sulfate adenylyltransferase subunit CysD 0.09 KEDOAH_17440 2-isopropylmalate synthase
Escherichia fergusonii Becca 0.66 EFB2_01158 Sulfate adenylyltransferase subunit 2 0.09 EFB2_03971 2-isopropylmalate synthase low > 86
Escherichia coli ECRC101 0.66 MCAODC_10965 cysD sulfate adenylyltransferase subunit CysD 0.09 MCAODC_01230 2-isopropylmalate synthase
Escherichia coli BW25113 0.66 b2752 cysD sulfate adenylyltransferase subunit 2 (NCBI) 0.09 b0074 leuA 2-isopropylmalate synthase (NCBI) 0.88 12
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_4128 sulfate adenylyltransferase subunit 2 0.53 Psyr_1257 2-isopropylmalate synthase 0.84 13
Pseudomonas fluorescens FW300-N2E3 0.66 AO353_05080 sulfate adenylyltransferase 0.53 AO353_15925 2-isopropylmalate synthase 0.74 2
Serratia liquefaciens MT49 0.66 IAI46_03715 sulfate adenylyltransferase subunit CysD 0.49 IAI46_09630 2-isopropylmalate synthase low > 86
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_4128 sulfate adenylyltransferase subunit 2 0.53 Psyr_1257 2-isopropylmalate synthase 0.79 19
Pseudomonas fluorescens GW456-L13 0.66 PfGW456L13_4993 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.52 PfGW456L13_4854 2-isopropylmalate synthase (EC 2.3.3.13) 0.76 10
Pantoea sp. MT58 0.66 IAI47_04180 sulfate adenylyltransferase subunit CysD 0.44 IAI47_10235 2-isopropylmalate synthase low > 76
Escherichia coli Nissle 1917 0.66 ECOLIN_RS15385 sulfate adenylyltransferase subunit CysD 0.09 ECOLIN_RS00400 2-isopropylmalate synthase low > 52
Pseudomonas putida KT2440 0.66 PP_1303 Sulfate adenylyltransferase subunit 2 0.54 PP_1025 2-isopropylmalate synthase 0.59 3
Pseudomonas fluorescens SBW25 0.65 PFLU_RS03765 sulfate adenylyltransferase subunit CysD 0.53 PFLU_RS24765 2-isopropylmalate synthase low > 109
Pseudomonas fluorescens FW300-N2C3 0.65 AO356_16665 sulfate adenylyltransferase 0.53 AO356_06550 2-isopropylmalate synthase 0.64 28
Pseudomonas fluorescens FW300-N2E2 0.65 Pf6N2E2_5257 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.53 Pf6N2E2_3170 2-isopropylmalate synthase (EC 2.3.3.13) 0.45 38
Pseudomonas fluorescens SBW25-INTG 0.65 PFLU_RS03765 sulfate adenylyltransferase subunit CysD 0.53 PFLU_RS24765 2-isopropylmalate synthase low > 109
Pseudomonas simiae WCS417 0.65 PS417_03715 sulfate adenylyltransferase subunit 2 0.53 PS417_23110 2-isopropylmalate synthase
Pseudomonas sp. RS175 0.65 PFR28_00193 Sulfate adenylyltransferase subunit 2 0.53 PFR28_00305 2-isopropylmalate synthase 0.29 81
Shewanella amazonensis SB2B 0.64 Sama_2891 sulfate adenylyltransferase subunit 2 (RefSeq) 0.09 Sama_0335 2-isopropylmalate synthase (RefSeq) 0.93 27
Alteromonas macleodii MIT1002 0.64 MIT1002_01274 Sulfate adenylyltransferase subunit 2 0.09 MIT1002_00949 2-isopropylmalate synthase
Azospirillum sp. SherDot2 0.64 MPMX19_06719 Sulfate adenylyltransferase subunit 2 0.59 MPMX19_01822 2-isopropylmalate synthase low > 112
Pseudomonas fluorescens FW300-N1B4 0.64 Pf1N1B4_1058 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.53 Pf1N1B4_847 2-isopropylmalate synthase (EC 2.3.3.13)
Erwinia tracheiphila SCR3 0.64 LU632_RS06425 cysD sulfate adenylyltransferase subunit CysD 0.11 LU632_RS02880 leuA 2-isopropylmalate synthase 0.63 74
Pseudomonas stutzeri RCH2 0.63 Psest_3294 sulfate adenylyltransferase, small subunit 0.55 Psest_1277 2-isopropylmalate synthase, yeast type
Caulobacter crescentus NA1000 Δfur 0.62 CCNA_01550 sulfate adenylyltransferase subunit 2 0.10 CCNA_01610 2-isopropylmalate synthase low > 67
Caulobacter crescentus NA1000 0.62 CCNA_01550 sulfate adenylyltransferase subunit 2 0.10 CCNA_01610 2-isopropylmalate synthase 0.87 41
Rhodospirillum rubrum S1H 0.62 Rru_A2289 Sulfate adenylyltransferase, small subunit (NCBI) 0.59 Rru_A1928 Yeast 2-isopropylmalate synthase (NCBI)
Bacteroides ovatus ATCC 8483 0.61 BACOVA_01768 putative sulfate adenylyltransferase subunit 2 0.10 BACOVA_04604 2-isopropylmalate synthase low > 94
Xanthomonas campestris pv. campestris strain 8004 0.61 Xcc-8004.1259.1 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.11 Xcc-8004.1056.1 2-isopropylmalate synthase (EC 2.3.3.13) low > 74
Bacteroides thetaiotaomicron VPI-5482 0.61 BT0414 sulfate adenylyltransferase subunit 2 (NCBI ptt file) 0.10 BT1861 2-isopropylmalate synthase (EC 2.3.3.13) (from data) low > 81
Lysobacter sp. OAE881 0.61 ABIE51_RS15820 sulfate adenylyltransferase subunit CysD 0.11 ABIE51_RS17570 2-isopropylmalate synthase low > 62
Parabacteroides merdae CL09T00C40 0.61 HMPREF1078_RS01705 sulfate adenylyltransferase subunit CysD 0.12 HMPREF1078_RS16665 2-isopropylmalate synthase low > 61
Bacteroides stercoris CC31F 0.61 HMPREF1181_RS04305 sulfate adenylyltransferase subunit CysD 0.11 HMPREF1181_RS14150 2-isopropylmalate synthase low > 56
Phocaeicola vulgatus CL09T03C04 0.60 HMPREF1058_RS02945 sulfate adenylyltransferase subunit CysD 0.10 HMPREF1058_RS14545 2-isopropylmalate synthase low > 67
Rhodanobacter sp. FW510-T8 0.60 OKGIIK_01295 cysD sulfate adenylyltransferase subunit CysD 0.10 OKGIIK_13575 leuA 2-isopropylmalate synthase low > 52
Phocaeicola dorei CL03T12C01 0.60 ABI39_RS02260 sulfate adenylyltransferase subunit CysD 0.10 ABI39_RS10195 2-isopropylmalate synthase low > 72
Rhodanobacter denitrificans FW104-10B01 0.60 LRK54_RS05520 sulfate adenylyltransferase subunit CysD 0.10 LRK54_RS10345 2-isopropylmalate synthase low > 59
Rhodanobacter denitrificans MT42 0.60 LRK55_RS05290 sulfate adenylyltransferase subunit CysD 0.10 LRK55_RS09985 2-isopropylmalate synthase
Azospirillum brasilense Sp245 0.59 AZOBR_RS33775 sulfate adenylyltransferase subunit 2 0.58 AZOBR_RS12155 2-isopropylmalate synthase low > 97
Bosea sp. OAE506 0.59 ABIE41_RS15370 sulfate adenylyltransferase subunit CysD 0.11 ABIE41_RS13000 2-isopropylmalate synthase low > 77
Dyella japonica UNC79MFTsu3.2 0.57 ABZR86_RS18865 sulfate adenylyltransferase subunit CysD 0.11 ABZR86_RS15970 2-isopropylmalate synthase low > 74
Sphingomonas koreensis DSMZ 15582 0.55 Ga0059261_4076 sulfate adenylyltransferase, small subunit 0.51 Ga0059261_4031 2-isopropylmalate synthase, yeast type low > 68
Mycobacterium tuberculosis H37Rv 0.43 Rv1285 Probable sulfate adenylyltransferase subunit 2 CysD 0.52 Rv3710 2-isopropylmalate synthase LeuA (alpha-isopropylmalate synthase) (alpha-IPM synthetase) (IPMS)
Castellaniella sp019104865 MT123 0.41 ABCV34_RS14115 sulfate adenylyltransferase subunit CysD 0.48 ABCV34_RS12420 2-isopropylmalate synthase 0.84 33
Dechlorosoma suillum PS 0.40 Dsui_1983 sulfate adenylyltransferase, small subunit 0.51 Dsui_3227 2-isopropylmalate synthase
Herbaspirillum seropedicae SmR1 0.39 HSERO_RS15565 sulfate adenylyltransferase subunit 2 0.52 HSERO_RS17185 2-isopropylmalate synthase 0.90 4
Hydrogenophaga sp. GW460-11-11-14-LB1 0.37 GFF4290 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.50 GFF4280 2-isopropylmalate synthase (EC 2.3.3.13) 0.71 27
Ralstonia sp. UNC404CL21Col 0.37 ABZR87_RS00195 sulfate adenylyltransferase subunit CysD 0.52 ABZR87_RS22365 2-isopropylmalate synthase low > 80
Ralstonia solanacearum IBSBF1503 0.37 RALBFv3_RS04585 sulfate adenylyltransferase subunit CysD 0.53 RALBFv3_RS21840 2-isopropylmalate synthase
Ralstonia solanacearum UW163 0.37 UW163_RS09085 sulfate adenylyltransferase subunit CysD 0.53 UW163_RS17345 2-isopropylmalate synthase
Ralstonia solanacearum PSI07 0.36 RPSI07_RS12790 sulfate adenylyltransferase subunit CysD 0.52 RPSI07_RS01320 2-isopropylmalate synthase low > 81
Acidovorax sp. GW101-3H11 0.36 Ac3H11_574 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.46 Ac3H11_5000 2-isopropylmalate synthase (EC 2.3.3.13) low > 79
Ralstonia solanacearum GMI1000 0.36 RS_RS12155 sulfate adenylyltransferase subunit CysD 0.51 RS_RS18695 2-isopropylmalate synthase 2 low > 80
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS16255 sulfate adenylyltransferase 0.49 RR42_RS21205 2-isopropylmalate synthase low > 128
Variovorax sp. OAS795 0.36 ABID97_RS15365 sulfate adenylyltransferase subunit CysD 0.50 ABID97_RS14905 2-isopropylmalate synthase low > 91
Variovorax sp. SCN45 0.36 GFF1203 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.50 GFF1164 2-isopropylmalate synthase (EC 2.3.3.13) 0.88 31
Burkholderia phytofirmans PsJN 0.34 BPHYT_RS04740 sulfate adenylyltransferase subunit 2 0.50 BPHYT_RS13280 2-isopropylmalate synthase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.34 H281DRAFT_00117 sulfate adenylyltransferase subunit 2 0.51 H281DRAFT_00385 2-isopropylmalate synthase low > 103
Magnetospirillum magneticum AMB-1 0.34 AMB_RS11195 sulfate adenylyltransferase subunit 2 0.55 AMB_RS17550 2-isopropylmalate synthase low > 64
Rhodopseudomonas palustris CGA009 0.31 TX73_003885 sulfate adenylyltransferase subunit 2 0.50 TX73_024250 2-isopropylmalate synthase low > 86

Not shown: 8 genomes with orthologs for Atu0817 only; 9 genomes with orthologs for Atu2264 only