Conservation of cofitness between Atu0354 and Atu0537 in Agrobacterium fabrum C58

86 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu0354 ferric uptake regulator 1.0 Atu0537 histidinol dehydrogenase 0.26 18
Rhizobium sp. OAE497 0.90 ABIE40_RS01715 Fur family transcriptional regulator 0.80 ABIE40_RS02725 histidinol dehydrogenase — —
Rhodospirillum rubrum S1H 0.69 Rru_A3767 Ferric uptake regulator (FUR) family (NCBI) 0.58 Rru_A2771 Histidinol dehydrogenase (NCBI) — —
Caulobacter crescentus NA1000 Δfur 0.69 CCNA_00055 ferric uptake regulation protein 0.51 CCNA_02431 histidinol dehydrogenase — —
Caulobacter crescentus NA1000 0.69 CCNA_00055 ferric uptake regulation protein 0.51 CCNA_02431 histidinol dehydrogenase — —
Magnetospirillum magneticum AMB-1 0.68 AMB_RS22570 transcriptional repressor 0.63 AMB_RS16905 histidinol dehydrogenase — —
Rhodopseudomonas palustris CGA009 0.67 TX73_002335 Fur family transcriptional regulator 0.67 TX73_023540 histidinol dehydrogenase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.67 A4249_RS14725 Fur family transcriptional regulator 0.31 A4249_RS10695 histidinol dehydrogenase — —
Sphingomonas koreensis DSMZ 15582 0.65 Ga0059261_1916 Fe2+/Zn2+ uptake regulation proteins 0.54 Ga0059261_1281 histidinol dehydrogenase — —
Phaeobacter inhibens DSM 17395 0.64 PGA1_c11400 ferric uptake regulation protein Fur 0.60 PGA1_c31190 histidinol dehydrogenase HisD — —
Dinoroseobacter shibae DFL-12 0.62 Dshi_2142 ferric uptake regulator, Fur family (RefSeq) 0.57 Dshi_0979 Histidinol dehydrogenase (RefSeq) — —
Azospirillum sp. SherDot2 0.62 MPMX19_00247 Ferric uptake regulation protein 0.59 MPMX19_05543 Histidinol dehydrogenase — —
Bosea sp. OAE506 0.52 ABIE41_RS08350 Fur family transcriptional regulator 0.61 ABIE41_RS24015 histidinol dehydrogenase low > 77
Sinorhizobium meliloti 1021 0.46 SMc02510 ferric uptake regulation protein 0.79 SMc02307 histidinol dehydrogenase low > 103
Pseudomonas fluorescens SBW25-INTG 0.36 PFLU_RS25915 ferric iron uptake transcriptional regulator 0.48 PFLU_RS04470 histidinol dehydrogenase — —
Pseudomonas simiae WCS417 0.36 PS417_24075 Fur family transcriptional regulator 0.48 PS417_04420 histidinol dehydrogenase — —
Pseudomonas fluorescens SBW25 0.36 PFLU_RS25915 ferric iron uptake transcriptional regulator 0.48 PFLU_RS04470 histidinol dehydrogenase — —
Desulfovibrio vulgaris Miyazaki F 0.36 DvMF_1364 ferric uptake regulator, Fur family (RefSeq) 0.37 DvMF_2814 hisD histidinol dehydrogenase (RefSeq) — —
Pantoea sp. MT58 0.36 IAI47_13860 ferric iron uptake transcriptional regulator 0.34 IAI47_07090 histidinol dehydrogenase — —
Desulfovibrio vulgaris Hildenborough JW710 0.36 DVU0942 fur ferric uptake regulator (Dmitry Rodionov) 0.39 DVU0796 hisD histidinol dehydrogenase (TIGR) — —
Escherichia coli Nissle 1917 0.36 ECOLIN_RS03695 ferric iron uptake transcriptional regulator 0.35 ECOLIN_RS11945 histidinol dehydrogenase — —
Escherichia coli ECRC62 0.36 BNILDI_21515 fur ferric iron uptake transcriptional regulator 0.34 BNILDI_14740 hisD Histidinol dehydrogenase — —
Escherichia coli ECRC99 0.36 KEDOAH_20840 fur ferric iron uptake transcriptional regulator 0.34 KEDOAH_03635 hisD Histidinol dehydrogenase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.36 GFF4596 Ferric uptake regulation protein FUR 0.34 GFF3912 Histidinol dehydrogenase (EC 1.1.1.23) low > 78
Escherichia coli ECRC102 0.36 NIAGMN_05185 fur ferric iron uptake transcriptional regulator 0.34 NIAGMN_22460 hisD Histidinol dehydrogenase — —
Escherichia coli ECRC101 0.36 MCAODC_26345 fur ferric iron uptake transcriptional regulator 0.34 MCAODC_20425 hisD Histidinol dehydrogenase — —
Erwinia tracheiphila SCR3 0.36 LU632_RS16195 fur ferric iron uptake transcriptional regulator 0.34 LU632_RS08945 hisD histidinol dehydrogenase — —
Escherichia coli ECOR38 0.36 HEPCGN_01095 fur ferric iron uptake transcriptional regulator 0.35 HEPCGN_03220 hisD Histidinol dehydrogenase — —
Escherichia fergusonii Becca 0.36 EFB2_03411 Ferric uptake regulation protein 0.35 EFB2_01836 Histidinol dehydrogenase — —
Escherichia coli ECOR27 0.36 NOLOHH_23510 fur ferric iron uptake transcriptional regulator 0.35 NOLOHH_15830 hisD Histidinol dehydrogenase — —
Escherichia coli BW25113 0.36 b0683 fur ferric uptake regulator (NCBI) 0.35 b2020 hisD histidinol dehydrogenase (NCBI) low > 76
Escherichia coli ECRC98 0.36 JDDGAC_10780 fur ferric iron uptake transcriptional regulator 0.34 JDDGAC_28625 hisD Histidinol dehydrogenase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.36 OHPLBJKB_03032 Ferric uptake regulation protein 0.34 OHPLBJKB_01680 Histidinol dehydrogenase low > 73
Escherichia coli ECRC101 0.36 OKFHMN_07130 fur ferric iron uptake transcriptional regulator 0.34 OKFHMN_24515 hisD Histidinol dehydrogenase — —
Escherichia coli BL21 0.36 ECD_00640 ferric iron uptake regulon transcriptional repressor; autorepressor 0.34 ECD_01922 bifunctional histidinal dehydrogenase/ histidinol dehydrogenase — —
Serratia liquefaciens MT49 0.35 IAI46_06120 ferric iron uptake transcriptional regulator 0.34 IAI46_08210 histidinol dehydrogenase — —
Dickeya dadantii 3937 0.35 DDA3937_RS06325 ferric iron uptake transcriptional regulator 0.34 DDA3937_RS09735 histidinol dehydrogenase — —
Enterobacter sp. TBS_079 0.35 MPMX20_01329 Ferric uptake regulation protein 0.34 MPMX20_03002 Histidinol dehydrogenase — —
Dickeya dianthicola ME23 0.35 DZA65_RS06715 ferric iron uptake transcriptional regulator 0.33 DZA65_RS10055 histidinol dehydrogenase — —
Dickeya dianthicola 67-19 0.35 HGI48_RS06370 ferric iron uptake transcriptional regulator 0.33 HGI48_RS09745 histidinol dehydrogenase — —
Enterobacter asburiae PDN3 0.35 EX28DRAFT_2292 Fe2+/Zn2+ uptake regulation proteins 0.34 EX28DRAFT_0539 histidinol dehydrogenase — —
Klebsiella michiganensis M5al 0.35 BWI76_RS08265 transcriptional repressor 0.33 BWI76_RS18925 histidinol dehydrogenase — —
Pectobacterium carotovorum WPP14 0.35 HER17_RS15090 ferric iron uptake transcriptional regulator 0.34 HER17_RS12230 histidinol dehydrogenase — —
Pseudomonas sp. S08-1 0.34 OH686_17045 Ferric uptake regulation protein FUR 0.46 OH686_08470 Histidinol dehydrogenase — —
Shewanella loihica PV-4 0.34 Shew_1661 fur ferric uptake regulator (RefSeq) 0.35 Shew_2198 histidinol dehydrogenase (RefSeq) — —
Dyella japonica UNC79MFTsu3.2 0.34 ABZR86_RS05680 ferric iron uptake transcriptional regulator 0.32 ABZR86_RS06730 histidinol dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.33 RALBFv3_RS22260 ferric iron uptake transcriptional regulator 0.43 RALBFv3_RS06845 histidinol dehydrogenase — —
Ralstonia solanacearum UW163 0.33 UW163_RS22805 ferric iron uptake transcriptional regulator 0.43 UW163_RS06770 histidinol dehydrogenase — —
Rhodanobacter denitrificans FW104-10B01 0.33 LRK54_RS17945 ferric iron uptake transcriptional regulator 0.30 LRK54_RS01605 histidinol dehydrogenase — —
Pseudomonas sp. RS175 0.33 PFR28_00070 Ferric uptake regulation protein 0.46 PFR28_00187 Histidinol dehydrogenase — —
Rhodanobacter denitrificans MT42 0.33 LRK55_RS17800 ferric iron uptake transcriptional regulator 0.31 LRK55_RS01385 histidinol dehydrogenase — —
Alteromonas macleodii MIT1002 0.33 MIT1002_02294 Ferric uptake regulation protein 0.36 MIT1002_02633 Histidinol dehydrogenase — —
Ralstonia solanacearum PSI07 0.33 RPSI07_RS00940 ferric iron uptake transcriptional regulator 0.44 RPSI07_RS10390 histidinol dehydrogenase — —
Vibrio cholerae E7946 ATCC 55056 0.32 CSW01_10515 transcriptional repressor 0.37 CSW01_05750 histidinol dehydrogenase — —
Xanthomonas campestris pv. campestris strain 8004 0.32 Xcc-8004.3432.1 Ferric uptake regulation protein FUR 0.33 Xcc-8004.2948.1 Histidinol dehydrogenase (EC 1.1.1.23) — —
Lysobacter sp. OAE881 0.32 ABIE51_RS11660 ferric iron uptake transcriptional regulator 0.32 ABIE51_RS13325 histidinol dehydrogenase — —
Ralstonia sp. UNC404CL21Col 0.32 ABZR87_RS17260 ferric iron uptake transcriptional regulator 0.44 ABZR87_RS02500 histidinol dehydrogenase — —
Ralstonia solanacearum GMI1000 0.32 RS_RS18345 ferric iron uptake transcriptional regulator 0.43 RS_RS14790 histidinol dehydrogenase — —
Herbaspirillum seropedicae SmR1 0.32 HSERO_RS03040 Fur family transcriptional regulator 0.46 HSERO_RS20345 histidinol dehydrogenase — —
Paraburkholderia sabiae LMG 24235 0.32 QEN71_RS26980 ferric iron uptake transcriptional regulator 0.43 QEN71_RS27865 histidinol dehydrogenase — —
Rhodanobacter sp. FW510-T8 0.32 OKGIIK_07355 fur ferric iron uptake transcriptional regulator 0.31 OKGIIK_04950 hisD histidinol dehydrogenase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.31 Psyr_4198 Ferric-uptake regulator 0.47 Psyr_4133 histidinol dehydrogenase — —
Burkholderia phytofirmans PsJN 0.31 BPHYT_RS16810 Fur family transcriptional regulator 0.43 BPHYT_RS17710 histidinol dehydrogenase — —
Paraburkholderia bryophila 376MFSha3.1 0.31 H281DRAFT_06316 ferric uptake regulator, Fur family 0.42 H281DRAFT_05652 histidinol dehydrogenase — —
Pseudomonas syringae pv. syringae B728a 0.31 Psyr_4198 Ferric-uptake regulator 0.47 Psyr_4133 histidinol dehydrogenase — —
Marinobacter adhaerens HP15 0.31 HP15_3085 ferric-uptake regulator 0.47 HP15_2428 histidinol dehydrogenase — —
Pseudomonas stutzeri RCH2 0.31 Psest_0961 Fe2+/Zn2+ uptake regulation proteins 0.47 Psest_3298 histidinol dehydrogenase — —
Acinetobacter radioresistens SK82 0.31 MPMX26_02407 Ferric uptake regulation protein 0.47 MPMX26_02587 Histidinol dehydrogenase — —
Shewanella oneidensis MR-1 0.31 SO1937 fur ferric uptake regulation protein (NCBI ptt file) 0.36 SO2073 hisD histidinol dehydrogenase (NCBI ptt file) — —
Pseudomonas putida KT2440 0.31 PP_4730 ferric iron uptake global transcriptional repressor Fur-Fe+2 0.46 PP_0966 Histidinol dehydrogenase — —
Paraburkholderia graminis OAS925 0.31 ABIE53_003531 Fur family ferric uptake transcriptional regulator 0.43 ABIE53_003701 histidinol dehydrogenase — —
Shewanella sp. ANA-3 0.31 Shewana3_1716 fur ferric uptake regulator (RefSeq) 0.36 Shewana3_1853 hisD histidinol dehydrogenase (RefSeq) — —
Castellaniella sp019104865 MT123 0.31 ABCV34_RS07475 ferric iron uptake transcriptional regulator 0.44 ABCV34_RS11230 histidinol dehydrogenase low > 48
Pseudomonas fluorescens GW456-L13 0.30 PfGW456L13_5107 Ferric uptake regulation protein FUR 0.46 PfGW456L13_5000 Histidinol dehydrogenase (EC 1.1.1.23) — —
Pseudomonas fluorescens FW300-N2C3 0.30 AO356_07515 Fur family transcriptional regulator 0.47 AO356_06965 histidinol dehydrogenase — —
Pseudomonas fluorescens FW300-N1B4 0.30 Pf1N1B4_1179 Ferric uptake regulation protein FUR 0.47 Pf1N1B4_1066 Histidinol dehydrogenase (EC 1.1.1.23) — —
Pseudomonas fluorescens FW300-N2E2 0.30 Pf6N2E2_3371 Ferric uptake regulation protein FUR 0.47 Pf6N2E2_3252 Histidinol dehydrogenase (EC 1.1.1.23) — —
Kangiella aquimarina DSM 16071 0.29 B158DRAFT_0599 Fe2+/Zn2+ uptake regulation proteins 0.29 B158DRAFT_2293 histidinol dehydrogenase low > 40
Cupriavidus basilensis FW507-4G11 0.29 RR42_RS17560 Fur family transcriptional regulator 0.45 RR42_RS18915 histidinol dehydrogenase — —
Variovorax sp. SCN45 0.29 GFF7296 Ferric uptake regulation protein FUR 0.45 GFF5345 Histidinol dehydrogenase (EC 1.1.1.23) — —
Variovorax sp. OAS795 0.28 ABID97_RS04505 ferric iron uptake transcriptional regulator 0.45 ABID97_RS23160 histidinol dehydrogenase — —
Synechococcus elongatus PCC 7942 0.28 Synpcc7942_0987 fur putative ferric uptake regulator, FUR family 0.46 Synpcc7942_1519 hisD histidinol dehydrogenase — —
Pseudomonas fluorescens FW300-N2E3 0.27 AO353_05665 Fur family transcriptional regulator 0.47 AO353_05110 histidinol dehydrogenase — —
Acidovorax sp. GW101-3H11 0.27 Ac3H11_684 Ferric uptake regulation protein FUR 0.44 Ac3H11_4724 Histidinol dehydrogenase (EC 1.1.1.23) — —
Mycobacterium tuberculosis H37Rv 0.24 Rv2359 Probable zinc uptake regulation protein Zur 0.32 Rv1599 Probable histidinol dehydrogenase HisD (HDH) — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.23 ABZR88_RS15615 Fur family transcriptional regulator 0.34 ABZR88_RS06880 histidinol dehydrogenase — —
Bifidobacterium breve UCC2003 0.20 BBR_RS13305 transcriptional repressor 0.34 BBR_RS17055 histidinol dehydrogenase low > 34

Not shown: 1 genomes with orthologs for Atu0354 only; 15 genomes with orthologs for Atu0537 only