Conservation of cofitness between DvMF_0355 and DvMF_0140 in Desulfovibrio vulgaris Miyazaki F

81 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Desulfovibrio vulgaris Miyazaki F 1.0 DvMF_0355 DNA mismatch repair protein MutS (RefSeq) 1.0 DvMF_0140 dTDP-4-dehydrorhamnose reductase (RefSeq) 0.51 7
Desulfovibrio vulgaris Hildenborough JW710 0.73 DVU1649 mutS DNA mismatch repair protein MutS (TIGR) 0.75 DVU1363 rfbD dTDP-4-dehydrorhamnose reductase (TIGR) low > 55
Pseudomonas sp. RS175 0.33 PFR28_00429 DNA mismatch repair protein MutS 0.25 PFR28_04891 dTDP-4-dehydrorhamnose reductase — —
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_05875 DNA mismatch repair protein MutS 0.25 AO356_10055 dTDP-4-dehydrorhamnose reductase — —
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_3035 DNA mismatch repair protein MutS 0.24 Pf6N2E2_3881 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) — —
Synechococcus elongatus PCC 7942 0.33 Synpcc7942_2247 mutS DNA mismatch repair protein 0.29 Synpcc7942_2099 rfbD dTDP-4-dehydrorhamnose reductase low > 38
Pseudomonas sp. S08-1 0.33 OH686_18195 DNA mismatch repair protein MutS 0.23 OH686_14365 dTDP-4-dehydrorhamnose reductase — —
Pseudomonas simiae WCS417 0.33 PS417_05680 DNA mismatch repair protein MutS 0.25 PS417_01315 dTDP-4-dehydrorhamnose reductase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.32 ABZR88_RS10580 DNA mismatch repair protein MutS 0.29 ABZR88_RS17490 dTDP-4-dehydrorhamnose reductase — —
Pseudomonas stutzeri RCH2 0.32 Psest_2875 DNA mismatch repair protein MutS 0.27 Psest_4265 dTDP-4-dehydrorhamnose reductase low > 67
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS05765 DNA mismatch repair protein MutS 0.26 PFLU_RS01410 dTDP-4-dehydrorhamnose reductase — —
Pseudomonas fluorescens SBW25 0.32 PFLU_RS05765 DNA mismatch repair protein MutS 0.26 PFLU_RS01410 dTDP-4-dehydrorhamnose reductase — —
Rahnella sp. WP5 0.32 EX31_RS07820 DNA mismatch repair protein MutS 0.23 EX31_RS11505 dTDP-4-dehydrorhamnose reductase — —
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_3117 DNA mismatch repair protein MutS 0.23 Pf1N1B4_342 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.32 Psyr_1376 DNA mismatch repair protein MutS 0.20 Psyr_0925 dTDP-4-dehydrorhamnose reductase — —
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_16625 DNA mismatch repair protein MutS 0.25 AO353_11870 dTDP-4-dehydrorhamnose reductase — —
Pseudomonas syringae pv. syringae B728a 0.32 Psyr_1376 DNA mismatch repair protein MutS 0.20 Psyr_0925 dTDP-4-dehydrorhamnose reductase — —
Shewanella amazonensis SB2B 0.32 Sama_1045 DNA mismatch repair protein MutS (RefSeq) 0.23 Sama_2239 dTDP-4-dehydrorhamnose reductase (RefSeq) — —
Pseudomonas putida KT2440 0.32 PP_1626 DNA mismatch repair protein MutS 0.18 PP_1784 dTDP-4-dehydrorhamnose reductase — —
Pseudomonas fluorescens GW456-L13 0.32 PfGW456L13_4672 DNA mismatch repair protein MutS 0.27 PfGW456L13_2198 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) — —
Shewanella loihica PV-4 0.32 Shew_1214 DNA mismatch repair protein (RefSeq) 0.26 Shew_1403 dTDP-4-dehydrorhamnose reductase (RefSeq) low > 60
Parabacteroides merdae CL09T00C40 0.32 HMPREF1078_RS06455 DNA mismatch repair protein MutS 0.32 HMPREF1078_RS04150 dTDP-4-dehydrorhamnose reductase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.32 GFF4773 DNA mismatch repair protein MutS 0.21 GFF3888 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) low > 78
Rhodanobacter sp. FW510-T8 0.32 OKGIIK_03705 mutS DNA mismatch repair protein MutS 0.21 OKGIIK_01160 rfbD dTDP-4-dehydrorhamnose reductase low > 52
Shewanella sp. ANA-3 0.32 Shewana3_1125 DNA mismatch repair protein MutS (RefSeq) 0.24 Shewana3_1381 dTDP-4-dehydrorhamnose reductase (RefSeq) — —
Pedobacter sp. GW460-11-11-14-LB5 0.31 CA265_RS08220 DNA mismatch repair protein MutS 0.28 CA265_RS19330 dTDP-4-dehydrorhamnose reductase low > 88
Bacteroides stercoris CC31F 0.31 HMPREF1181_RS01980 DNA mismatch repair protein MutS 0.27 HMPREF1181_RS05590 dTDP-4-dehydrorhamnose reductase — —
Dinoroseobacter shibae DFL-12 0.31 Dshi_3466 DNA mismatch repair protein MutS (RefSeq) 0.23 Dshi_4117 dTDP-4-dehydrorhamnose reductase (RefSeq) low > 64
Phocaeicola dorei CL03T12C01 0.31 ABI39_RS05500 DNA mismatch repair protein MutS 0.30 ABI39_RS13375 dTDP-4-dehydrorhamnose reductase low > 72
Phocaeicola vulgatus CL09T03C04 0.31 HMPREF1058_RS11435 DNA mismatch repair protein MutS 0.27 HMPREF1058_RS07940 dTDP-4-dehydrorhamnose reductase — —
Fusobacterium nucleatum SB010 0.31 HUW76_04335 DNA mismatch repair protein MutS 0.23 HUW76_01315 dTDP-4-dehydrorhamnose reductase low > 35
Erwinia tracheiphila SCR3 0.31 LU632_RS06485 mutS DNA mismatch repair protein MutS 0.21 LU632_RS08855 rfbD dTDP-4-dehydrorhamnose reductase low > 74
Echinicola vietnamensis KMM 6221, DSM 17526 0.31 Echvi_0960 DNA mismatch repair protein MutS 0.18 Echvi_1746 dTDP-4-dehydrorhamnose reductase — —
Klebsiella michiganensis M5al 0.31 BWI76_RS22600 DNA mismatch repair protein MutS 0.27 BWI76_RS19050 NAD(P)-dependent oxidoreductase low > 92
Dickeya dianthicola 67-19 0.31 HGI48_RS05230 DNA mismatch repair protein MutS 0.26 HGI48_RS06770 dTDP-4-dehydrorhamnose reductase low > 71
Lysobacter sp. OAE881 0.31 ABIE51_RS07785 DNA mismatch repair protein MutS 0.24 ABIE51_RS15605 dTDP-4-dehydrorhamnose reductase — —
Rhodanobacter denitrificans MT42 0.31 LRK55_RS14650 DNA mismatch repair protein MutS 0.23 LRK55_RS05435 dTDP-4-dehydrorhamnose reductase — —
Bacteroides thetaiotaomicron VPI-5482 0.31 BT3121 DNA mismatch repair protein mutS (NCBI ptt file) 0.27 BT0465 dTDP-4-dehydrorhamnose reductase (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.31 BACOVA_02824 DNA mismatch repair protein MutS 0.27 BACOVA_04459 dTDP-4-dehydrorhamnose reductase — —
Dickeya dianthicola ME23 0.31 DZA65_RS05570 DNA mismatch repair protein MutS 0.26 DZA65_RS07125 dTDP-4-dehydrorhamnose reductase low > 75
Dickeya dadantii 3937 0.31 DDA3937_RS05230 DNA mismatch repair protein MutS 0.27 DDA3937_RS06750 dTDP-4-dehydrorhamnose reductase low > 74
Escherichia coli ECOR38 0.31 HEPCGN_19705 mutS DNA mismatch repair protein MutS 0.22 HEPCGN_03110 rfbD dTDP-4-dehydrorhamnose reductase — —
Shewanella oneidensis MR-1 0.31 SO3431 mutS DNA mismatch repair protein MutS (NCBI ptt file) 0.22 SO1653 rfbD dTDP-4-dehydrorhamnose reductase (NCBI ptt file) — —
Azospirillum brasilense Sp245 0.31 AZOBR_RS02125 DNA mismatch repair protein MutS 0.25 AZOBR_RS33420 dTDP-4-dehydrorhamnose reductase low > 97
Escherichia coli BW25113 0.31 b2733 mutS DNA mismatch repair protein (NCBI) 0.22 b2040 rfbD dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.31 OHPLBJKB_01000 DNA mismatch repair protein MutS 0.19 OHPLBJKB_01662 dTDP-4-dehydrorhamnose reductase low > 73
Dechlorosoma suillum PS 0.31 Dsui_2244 DNA mismatch repair protein MutS 0.23 Dsui_1949 dTDP-4-dehydrorhamnose reductase — —
Escherichia coli BL21 0.31 ECD_02583 methyl-directed mismatch repair protein 0.22 ECD_01946 dTDP-L-rhamnose synthase, NAD(P)-dependent dTDP-4-dehydrorhamnose reductase subunit low > 60
Escherichia fergusonii Becca 0.31 EFB2_01179 DNA mismatch repair protein MutS 0.22 EFB2_01814 dTDP-4-dehydrorhamnose reductase — —
Phaeobacter inhibens DSM 17395 0.31 PGA1_c35000 DNA mismatch repair protein MutS 0.21 PGA1_65p00230 dTDP-4-dehydrorhamnose reductase RfbD — —
Rhodanobacter denitrificans FW104-10B01 0.31 LRK54_RS14935 DNA mismatch repair protein MutS 0.23 LRK54_RS05680 dTDP-4-dehydrorhamnose reductase — —
Dyella japonica UNC79MFTsu3.2 0.30 ABZR86_RS00630 DNA mismatch repair protein MutS 0.25 ABZR86_RS18720 dTDP-4-dehydrorhamnose reductase low > 74
Rhodospirillum rubrum S1H 0.30 Rru_A3541 MutS 1 protein (NCBI) 0.22 Rru_B0049 dTDP-4-dehydrorhamnose reductase (NCBI) low > 58
Paraburkholderia bryophila 376MFSha3.1 0.30 H281DRAFT_00537 DNA mismatch repair protein MutS 0.24 H281DRAFT_04825 dTDP-4-dehydrorhamnose reductase — —
Azospirillum sp. SherDot2 0.30 MPMX19_00908 DNA mismatch repair protein MutS 0.22 MPMX19_06726 dTDP-4-dehydrorhamnose reductase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.30 CA264_18545 DNA mismatch repair protein MutS 0.17 CA264_19930 NAD(P)-dependent oxidoreductase — —
Alteromonas macleodii MIT1002 0.30 MIT1002_00953 DNA mismatch repair protein MutS 0.28 MIT1002_03558 dTDP-4-dehydrorhamnose reductase — —
Burkholderia phytofirmans PsJN 0.30 BPHYT_RS12475 DNA mismatch repair protein MutS 0.25 BPHYT_RS04280 dTDP-4-dehydrorhamnose reductase — —
Herbaspirillum seropedicae SmR1 0.30 HSERO_RS16360 DNA mismatch repair protein MutS 0.26 HSERO_RS21855 dTDP-4-dehydrorhamnose reductase — —
Magnetospirillum magneticum AMB-1 0.30 AMB_RS01455 DNA mismatch repair protein MutS 0.22 AMB_RS07440 dTDP-4-dehydrorhamnose reductase low > 64
Paraburkholderia graminis OAS925 0.30 ABIE53_002719 DNA mismatch repair protein MutS 0.23 ABIE53_001140 dTDP-4-dehydrorhamnose reductase low > 113
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.3760.1 DNA mismatch repair protein MutS 0.21 Xcc-8004.4483.1 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) — —
Cupriavidus basilensis FW507-4G11 0.30 RR42_RS06285 DNA mismatch repair protein MutS 0.22 RR42_RS15835 dTDP-4-dehydrorhamnose reductase — —
Ralstonia solanacearum PSI07 0.29 RPSI07_RS18440 DNA mismatch repair protein MutS 0.22 RPSI07_RS20610 dTDP-4-dehydrorhamnose reductase — —
Ralstonia solanacearum GMI1000 0.29 RS_RS05735 DNA mismatch repair protein MutS 0.22 RS_RS03435 dTDP-4-dehydrorhamnose reductase — —
Ralstonia sp. UNC404CL21Col 0.29 ABZR87_RS10580 DNA mismatch repair protein MutS 0.22 ABZR87_RS08650 dTDP-4-dehydrorhamnose reductase low > 80
Castellaniella sp019104865 MT123 0.29 ABCV34_RS00270 DNA mismatch repair protein MutS 0.23 ABCV34_RS02405 dTDP-4-dehydrorhamnose reductase — —
Paraburkholderia sabiae LMG 24235 0.29 QEN71_RS06085 DNA mismatch repair protein MutS 0.22 QEN71_RS25740 dTDP-4-dehydrorhamnose reductase — —
Acinetobacter radioresistens SK82 0.29 MPMX26_01954 DNA mismatch repair protein MutS 0.22 MPMX26_00451 dTDP-4-dehydrorhamnose reductase low > 36
Ralstonia solanacearum IBSBF1503 0.29 RALBFv3_RS14920 DNA mismatch repair protein MutS 0.21 RALBFv3_RS12650 dTDP-4-dehydrorhamnose reductase — —
Ralstonia solanacearum UW163 0.29 UW163_RS12390 DNA mismatch repair protein MutS 0.21 UW163_RS00915 dTDP-4-dehydrorhamnose reductase — —
Agrobacterium fabrum C58 0.28 Atu0345 DNA mismatch repair protein, MutS family 0.23 Atu4616 dTDP-4-dehydrorhamnose reductase 0.30 46
Rhodopseudomonas palustris CGA009 0.28 TX73_002655 DNA mismatch repair protein MutS 0.25 TX73_000615 dTDP-4-dehydrorhamnose reductase low > 86
Rhizobium sp. OAE497 0.28 ABIE40_RS01775 DNA mismatch repair protein MutS 0.23 ABIE40_RS08665 dTDP-4-dehydrorhamnose reductase low > 107
Caulobacter crescentus NA1000 Δfur 0.27 CCNA_00012 DNA mismatch repair protein MutS 0.26 CCNA_01198 dTDP-4-dehydrorhamnose reductase low > 67
Caulobacter crescentus NA1000 0.27 CCNA_00012 DNA mismatch repair protein MutS 0.26 CCNA_01198 dTDP-4-dehydrorhamnose reductase low > 66
Sinorhizobium meliloti 1021 0.27 SMc01125 DNA mismatch repair protein MutS 0.23 SM_b21327 dTDP-4-dehydrorhamnose reductase low > 103
Acidovorax sp. GW101-3H11 0.26 Ac3H11_3641 DNA mismatch repair protein MutS 0.20 Ac3H11_1881 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.26 GFF3599 DNA mismatch repair protein MutS 0.19 GFF1838 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) — —
Bosea sp. OAE506 0.26 ABIE41_RS03650 DNA mismatch repair protein MutS 0.25 ABIE41_RS02860 dTDP-4-dehydrorhamnose reductase low > 77
Variovorax sp. SCN45 0.26 GFF6634 DNA mismatch repair protein MutS 0.23 GFF6881 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) — —
Variovorax sp. OAS795 0.25 ABID97_RS20815 DNA mismatch repair protein MutS 0.23 ABID97_RS05665 dTDP-4-dehydrorhamnose reductase — —

Not shown: 18 genomes with orthologs for DvMF_0355 only; 1 genomes with orthologs for DvMF_0140 only