Conservation of cofitness between Shew_1298 and Shew_1601 in Shewanella loihica PV-4

84 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella loihica PV-4 1.0 Shew_1298 guaA bifunctional GMP synthase/glutamine amidotransferase protein (RefSeq) 1.0 Shew_1601 3-oxoacyl-(acyl carrier protein) synthase III (RefSeq) 0.65 16
Shewanella sp. ANA-3 0.94 Shewana3_1236 guaA GMP synthase (RefSeq) 0.91 Shewana3_2560 3-oxoacyl-(acyl carrier protein) synthase III (RefSeq) low > 73
Shewanella oneidensis MR-1 0.94 SO3292 guaA GMP synthase (NCBI ptt file) 0.91 SO2778 fabH-1 3-oxoacyl-(acyl-carrier-protein) synthase III (NCBI ptt file)
Shewanella amazonensis SB2B 0.91 Sama_2358 guaA GMP synthase (RefSeq) 0.91 Sama_1982 3-oxoacyl-(acyl carrier protein) synthase III (RefSeq)
Serratia liquefaciens MT49 0.87 IAI46_19205 glutamine-hydrolyzing GMP synthase 0.68 IAI46_09780 ketoacyl-ACP synthase III
Pectobacterium carotovorum WPP14 0.86 HER17_RS06160 glutamine-hydrolyzing GMP synthase 0.69 HER17_RS08640 ketoacyl-ACP synthase III
Pantoea sp. MT58 0.86 IAI47_05110 glutamine-hydrolyzing GMP synthase 0.66 IAI47_12080 ketoacyl-ACP synthase III
Dickeya dadantii 3937 0.85 DDA3937_RS15415 glutamine-hydrolyzing GMP synthase 0.65 DDA3937_RS13130 ketoacyl-ACP synthase III
Dickeya dianthicola 67-19 0.85 HGI48_RS15530 glutamine-hydrolyzing GMP synthase 0.64 HGI48_RS13195 ketoacyl-ACP synthase III
Dickeya dianthicola ME23 0.85 DZA65_RS16605 glutamine-hydrolyzing GMP synthase 0.64 DZA65_RS13665 ketoacyl-ACP synthase III
Klebsiella michiganensis M5al 0.85 BWI76_RS21025 GMP synthase (glutamine-hydrolyzing) 0.69 BWI76_RS11080 ketoacyl-ACP synthase III
Enterobacter sp. TBS_079 0.85 MPMX20_03381 GMP synthase [glutamine-hydrolyzing] 0.71 MPMX20_01771 3-oxoacyl-[acyl-carrier-protein] synthase 3
Enterobacter asburiae PDN3 0.85 EX28DRAFT_0140 GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit/GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit 0.71 EX28DRAFT_1838 3-oxoacyl-(acyl-carrier-protein) synthase III
Rahnella sp. WP5 0.85 EX31_RS20445 glutamine-hydrolyzing GMP synthase 0.67 EX31_RS24425 ketoacyl-ACP synthase III
Escherichia coli ECRC101 0.84 MCAODC_12295 guaA glutamine-hydrolyzing GMP synthase 0.70 MCAODC_22945 fabH beta-ketoacyl-ACP synthase III
Escherichia coli ECRC101 0.84 OKFHMN_21765 guaA glutamine-hydrolyzing GMP synthase 0.70 OKFHMN_03585 fabH beta-ketoacyl-ACP synthase III
Escherichia coli Nissle 1917 0.84 ECOLIN_RS14235 glutamine-hydrolyzing GMP synthase 0.70 ECOLIN_RS06305 beta-ketoacyl-ACP synthase III
Escherichia coli ECRC99 0.84 KEDOAH_06455 guaA glutamine-hydrolyzing GMP synthase 0.70 KEDOAH_24170 fabH beta-ketoacyl-ACP synthase III
Escherichia coli ECOR27 0.84 NOLOHH_13415 guaA glutamine-hydrolyzing GMP synthase 0.70 NOLOHH_21115 fabH beta-ketoacyl-ACP synthase III
Escherichia coli HS(pFamp)R (ATCC 700891) 0.84 OHPLBJKB_01202 GMP synthase [glutamine-hydrolyzing] 0.70 OHPLBJKB_02575 3-oxoacyl-[acyl-carrier-protein] synthase 3
Escherichia fergusonii Becca 0.84 EFB2_01386 GMP synthase [glutamine-hydrolyzing] 0.70 EFB2_02884 3-oxoacyl-[acyl-carrier-protein] synthase 3
Escherichia coli ECRC102 0.84 NIAGMN_19535 guaA glutamine-hydrolyzing GMP synthase 0.70 NIAGMN_24245 fabH beta-ketoacyl-ACP synthase III
Escherichia coli ECRC98 0.84 JDDGAC_25440 guaA glutamine-hydrolyzing GMP synthase 0.70 JDDGAC_07245 fabH beta-ketoacyl-ACP synthase III
Escherichia coli ECOR38 0.84 HEPCGN_20905 guaA glutamine-hydrolyzing GMP synthase 0.70 HEPCGN_23895 fabH beta-ketoacyl-ACP synthase III
Escherichia coli BL21 0.84 ECD_02399 GMP synthetase (glutamine aminotransferase) 0.70 ECD_01087 3-oxoacyl-[acyl-carrier-protein] synthase III
Escherichia coli BW25113 0.84 b2507 guaA bifunctional GMP synthase/glutamine amidotransferase protein (NCBI) 0.70 b1091 fabH 3-oxoacyl-(acyl carrier protein) synthase (NCBI)
Escherichia coli ECRC62 0.84 BNILDI_12215 guaA glutamine-hydrolyzing GMP synthase 0.70 BNILDI_19275 fabH beta-ketoacyl-ACP synthase III
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF2161 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) 0.70 GFF3373 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41)
Alteromonas macleodii MIT1002 0.83 MIT1002_02778 GMP synthase [glutamine-hydrolyzing] 0.64 MIT1002_01731 3-oxoacyl-[acyl-carrier-protein] synthase 3
Erwinia tracheiphila SCR3 0.82 LU632_RS17750 guaA glutamine-hydrolyzing GMP synthase 0.66 LU632_RS14830 ketoacyl-ACP synthase III
Vibrio cholerae E7946 ATCC 55056 0.82 CSW01_03985 GMP synthase (glutamine-hydrolyzing) 0.70 CSW01_10105 3-oxoacyl-ACP synthase III
Kangiella aquimarina DSM 16071 0.76 B158DRAFT_1159 GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit/GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit 0.61 B158DRAFT_1755 3-oxoacyl-(acyl-carrier-protein) synthase III
Pseudomonas stutzeri RCH2 0.73 Psest_1287 GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit/GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit 0.14 Psest_1462 3-oxoacyl-[acyl-carrier-protein] synthase III
Marinobacter adhaerens HP15 0.72 HP15_2050 bifunctional GMP synthase/glutamine amidotransferase protein 0.59 HP15_1625 3-oxoacyl-(acyl carrier protein) synthase III
Xanthomonas campestris pv. campestris strain 8004 0.72 Xcc-8004.2393.1 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) 0.57 Xcc-8004.3998.1 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41)
Lysobacter sp. OAE881 0.71 ABIE51_RS09480 glutamine-hydrolyzing GMP synthase 0.59 ABIE51_RS13955 beta-ketoacyl-ACP synthase III
Pseudomonas fluorescens FW300-N2E3 0.71 AO353_15955 GMP synthase 0.18 AO353_10365 3-oxoacyl-ACP synthase
Pseudomonas sp. S08-1 0.70 OH686_17595 GMP synthase [glutamine-hydrolyzing], amidotransferase subunit / GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit 0.17 OH686_05520 beta-ketodecanoyl-[acyl-carrier-protein] synthase
Dyella japonica UNC79MFTsu3.2 0.70 ABZR86_RS05405 glutamine-hydrolyzing GMP synthase 0.54 ABZR86_RS06180 beta-ketoacyl-ACP synthase III
Rhodanobacter sp. FW510-T8 0.68 OKGIIK_07090 guaA glutamine-hydrolyzing GMP synthase 0.53 OKGIIK_05705 fabH 3-oxoacyl-ACP synthase
Rhodanobacter denitrificans FW104-10B01 0.68 LRK54_RS00110 glutamine-hydrolyzing GMP synthase 0.53 LRK54_RS01195 ketoacyl-ACP synthase III
Rhodanobacter denitrificans MT42 0.68 LRK55_RS18105 glutamine-hydrolyzing GMP synthase 0.53 LRK55_RS00970 beta-ketoacyl-ACP synthase III
Herbaspirillum seropedicae SmR1 0.66 HSERO_RS11020 GMP synthase 0.48 HSERO_RS09595 3-oxoacyl-ACP synthase
Acinetobacter radioresistens SK82 0.66 MPMX26_00074 GMP synthase [glutamine-hydrolyzing] 0.16 MPMX26_02007 Beta-ketodecanoyl-[acyl-carrier-protein] synthase
Paraburkholderia sabiae LMG 24235 0.66 QEN71_RS06550 glutamine-hydrolyzing GMP synthase 0.46 QEN71_RS04545 beta-ketoacyl-ACP synthase III
Burkholderia phytofirmans PsJN 0.65 BPHYT_RS12010 GMP synthase [glutamine-hydrolyzing] 0.46 BPHYT_RS14435 3-oxoacyl-ACP synthase
Paraburkholderia bryophila 376MFSha3.1 0.65 H281DRAFT_00637 GMP synthase (glutamine-hydrolyzing) 0.45 H281DRAFT_04349 3-oxoacyl-[acyl-carrier-protein] synthase III
Paraburkholderia graminis OAS925 0.65 ABIE53_002476 GMP synthase (glutamine-hydrolyzing) 0.45 ABIE53_003049 3-oxoacyl-[acyl-carrier-protein] synthase-3
Dechlorosoma suillum PS 0.64 Dsui_2670 GMP synthase (glutamine-hydrolyzing) 0.50 Dsui_2446 3-oxoacyl-(acyl-carrier-protein) synthase III
Ralstonia solanacearum IBSBF1503 0.63 RALBFv3_RS00525 glutamine-hydrolyzing GMP synthase 0.50 RALBFv3_RS14420 ketoacyl-ACP synthase III
Ralstonia solanacearum UW163 0.63 UW163_RS13855 glutamine-hydrolyzing GMP synthase 0.50 UW163_RS11885 ketoacyl-ACP synthase III
Ralstonia solanacearum PSI07 0.63 RPSI07_RS16965 glutamine-hydrolyzing GMP synthase 0.50 RPSI07_RS19040 ketoacyl-ACP synthase III
Ralstonia solanacearum GMI1000 0.62 RS_RS07180 glutamine-hydrolyzing GMP synthase 0.49 RS_RS05200 3-oxoacyl-ACP synthase III
Ralstonia sp. UNC404CL21Col 0.62 ABZR87_RS11975 glutamine-hydrolyzing GMP synthase 0.49 ABZR87_RS10135 beta-ketoacyl-ACP synthase III
Hydrogenophaga sp. GW460-11-11-14-LB1 0.61 GFF4357 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) 0.44 GFF3333 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.180)
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS11740 GMP synthase 0.47 RR42_RS14110 3-oxoacyl-ACP synthase
Castellaniella sp019104865 MT123 0.61 ABCV34_RS04890 glutamine-hydrolyzing GMP synthase 0.43 ABCV34_RS08380 beta-ketoacyl-ACP synthase III
Acidovorax sp. GW101-3H11 0.60 Ac3H11_2854 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) 0.49 Ac3H11_1580 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.180)
Variovorax sp. SCN45 0.60 GFF206 GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2) / GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2) 0.47 GFF3857 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.180)
Variovorax sp. OAS795 0.60 ABID97_RS16400 glutamine-hydrolyzing GMP synthase 0.46 ABID97_RS08300 beta-ketoacyl-ACP synthase III
Brevundimonas sp. GW460-12-10-14-LB2 0.56 A4249_RS03045 glutamine-hydrolyzing GMP synthase 0.44 A4249_RS05970 ketoacyl-ACP synthase III
Azospirillum brasilense Sp245 0.56 AZOBR_RS16060 GMP synthase 0.52 AZOBR_RS10090 3-oxoacyl-ACP synthase
Fusobacterium nucleatum SB010 0.56 HUW76_08155 glutamine-hydrolyzing GMP synthase 0.40 HUW76_02230 ketoacyl-ACP synthase III
Rhodospirillum rubrum S1H 0.55 Rru_A0355 Glutamine amidotransferase class-I (NCBI) 0.47 Rru_A1667 Beta-ketoacyl-acyl carrier protein synthase III (FabH) (NCBI)
Azospirillum sp. SherDot2 0.55 MPMX19_00831 GMP synthase [glutamine-hydrolyzing] 0.52 MPMX19_00742 3-oxoacyl-[acyl-carrier-protein] synthase 3
Bosea sp. OAE506 0.55 ABIE41_RS15990 glutamine-hydrolyzing GMP synthase 0.49 ABIE41_RS19690 beta-ketoacyl-ACP synthase III
Magnetospirillum magneticum AMB-1 0.54 AMB_RS03760 glutamine-hydrolyzing GMP synthase 0.52 AMB_RS11890 3-oxoacyl-ACP synthase III
Rhizobium sp. OAE497 0.53 ABIE40_RS01255 glutamine-hydrolyzing GMP synthase 0.47 ABIE40_RS06785 beta-ketoacyl-ACP synthase III
Sphingomonas koreensis DSMZ 15582 0.53 Ga0059261_0317 GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit/GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit 0.46 Ga0059261_2323 3-oxoacyl-(acyl-carrier-protein) synthase III
Caulobacter crescentus NA1000 0.53 CCNA_01692 GMP synthase GuaA 0.41 CCNA_01432 3-oxoacyl-(acyl-carrier-protein) synthase III
Caulobacter crescentus NA1000 Δfur 0.53 CCNA_01692 GMP synthase GuaA 0.41 CCNA_01432 3-oxoacyl-(acyl-carrier-protein) synthase III
Agrobacterium fabrum C58 0.53 Atu0281 GMP synthase 0.45 Atu1179 3-oxoacyl-(acyl-carrier-protein) synthase III
Sinorhizobium meliloti 1021 0.53 SMc00394 GMP synthase 0.43 SMc01785 3-oxoacyl-ACP synthase
Phaeobacter inhibens DSM 17395 0.52 PGA1_c14610 GMP synthase 0.43 PGA1_c11240 3-oxoacyl-[acyl-carrier-protein] synthase 3
Rhodopseudomonas palustris CGA009 0.52 TX73_011370 glutamine-hydrolyzing GMP synthase 0.47 TX73_014200 ketoacyl-ACP synthase III
Desulfovibrio vulgaris Hildenborough JW710 0.52 DVU1043 guaA GMP synthase (TIGR) 0.33 DVU1207 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III (TIGR)
Pedobacter sp. GW460-11-11-14-LB5 0.51 CA265_RS15025 GMP synthase (glutamine-hydrolyzing) 0.41 CA265_RS18300 3-oxoacyl-ACP synthase
Synechococcus elongatus PCC 7942 0.51 Synpcc7942_0189 guaA bifunctional GMP synthase/glutamine amidotransferase protein 0.40 Synpcc7942_1455 fabH 3-oxoacyl-(acyl carrier protein) synthase III
Dinoroseobacter shibae DFL-12 0.50 Dshi_1587 GMP synthase, large subunit (RefSeq) 0.39 Dshi_1720 3-oxoacyl-(acyl-carrier-protein) synthase III (RefSeq)
Bacteroides ovatus ATCC 8483 0.50 BACOVA_05099 GMP synthase (glutamine-hydrolyzing) domain protein 0.35 BACOVA_00325 beta-ketoacyl-acyl-carrier-protein synthase III
Echinicola vietnamensis KMM 6221, DSM 17526 0.49 Echvi_0152 GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit/GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit 0.39 Echvi_3889 3-oxoacyl-(acyl-carrier-protein) synthase III
Parabacteroides merdae CL09T00C40 0.49 HMPREF1078_RS10120 glutamine-hydrolyzing GMP synthase 0.35 HMPREF1078_RS17245 beta-ketoacyl-ACP synthase III
Bacteroides thetaiotaomicron VPI-5482 0.49 BT4265 GMP synthase (glutamine-hydrolyzing) (NCBI ptt file) 0.35 BT0122 3-oxoacyl-[acyl-carrier-protein] synthase III (NCBI ptt file) low > 81
Pontibacter actiniarum KMM 6156, DSM 19842 0.49 CA264_08025 GMP synthase (glutamine-hydrolyzing) 0.43 CA264_06605 ketoacyl-ACP synthase III low > 74
Mycobacterium tuberculosis H37Rv 0.45 Rv3396c Probable GMP synthase [glutamine-hydrolyzing] GuaA (glutamine amidotransferase) (GMP synthetase) 0.29 Rv0533c 3-oxoacyl-[acyl-carrier-protein] synthase III FabH (beta-ketoacyl-ACP synthase III) (KAS III)

Not shown: 17 genomes with orthologs for Shew_1298 only; 0 genomes with orthologs for Shew_1601 only