Conservation of cofitness between BT3918 and BT1381 in Bacteroides thetaiotaomicron VPI-5482

88 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT3918 pyridoxal phosphate biosynthetic protein pdxJ (NCBI ptt file) 1.0 BT1381 formyltetrahydrofolate deformylase (NCBI ptt file) 0.84 9
Bacteroides ovatus ATCC 8483 0.97 BACOVA_01142 pyridoxine 5'-phosphate synthase 0.99 BACOVA_00222 formyltetrahydrofolate deformylase 0.82 3
Bacteroides stercoris CC31F 0.93 HMPREF1181_RS06645 pyridoxine 5'-phosphate synthase 0.89 HMPREF1181_RS11085 formyltetrahydrofolate deformylase — —
Phocaeicola dorei CL03T12C01 0.87 ABI39_RS02500 pyridoxine 5'-phosphate synthase 0.91 ABI39_RS19915 formyltetrahydrofolate deformylase 0.76 21
Phocaeicola vulgatus CL09T03C04 0.87 HMPREF1058_RS08325 pyridoxine 5'-phosphate synthase 0.92 HMPREF1058_RS06160 formyltetrahydrofolate deformylase 0.90 4
Mucilaginibacter yixingensis YX-36 DSM 26809 0.62 ABZR88_RS01795 pyridoxine 5'-phosphate synthase 0.33 ABZR88_RS14140 formyltetrahydrofolate deformylase — —
Pedobacter sp. GW460-11-11-14-LB5 0.61 CA265_RS25170 pyridoxine 5'-phosphate synthase 0.31 CA265_RS21155 formyltetrahydrofolate deformylase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.60 Echvi_0661 pyridoxine 5'-phosphate synthase 0.61 Echvi_1543 formyltetrahydrofolate deformylase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.44 GFF3349 Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) 0.42 GFF2737 Formyltetrahydrofolate deformylase (EC 3.5.1.10) — —
Acidovorax sp. GW101-3H11 0.43 Ac3H11_1563 Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) 0.41 Ac3H11_4485 Formyltetrahydrofolate deformylase (EC 3.5.1.10) — —
Xanthomonas campestris pv. campestris strain 8004 0.43 Xcc-8004.17.1 Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) 0.40 Xcc-8004.395.1 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 0.65 28
Agrobacterium fabrum C58 0.41 Atu2024 pyridoxal phosphate biosynthesis protein 0.38 Atu4231 formyltetrahydrofolate deformylase — —
Lysobacter sp. OAE881 0.41 ABIE51_RS00810 pyridoxine 5'-phosphate synthase 0.37 ABIE51_RS07700 formyltetrahydrofolate deformylase — —
Sinorhizobium meliloti 1021 0.41 SMc01407 pyridoxine 5'-phosphate synthase 0.38 SMa2141 formyltetrahydrofolate deformylase — —
Rhizobium sp. OAE497 0.40 ABIE40_RS11420 pyridoxine 5'-phosphate synthase 0.38 ABIE40_RS00960 formyltetrahydrofolate deformylase — —
Variovorax sp. SCN45 0.40 GFF3873 Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) 0.41 GFF3790 Formyltetrahydrofolate deformylase (EC 3.5.1.10) — —
Variovorax sp. OAS795 0.39 ABID97_RS08380 pyridoxine 5'-phosphate synthase 0.42 ABID97_RS00100 formyltetrahydrofolate deformylase — —
Cupriavidus basilensis FW507-4G11 0.35 RR42_RS14025 pyridoxine 5'-phosphate synthase 0.40 RR42_RS13800 formyltetrahydrofolate deformylase — —
Burkholderia phytofirmans PsJN 0.34 BPHYT_RS14355 pyridoxine 5'-phosphate synthase 0.42 BPHYT_RS02955 formyltetrahydrofolate deformylase — —
Paraburkholderia bryophila 376MFSha3.1 0.33 H281DRAFT_04365 pyridoxine 5'-phosphate synthase 0.43 H281DRAFT_01917 formyltetrahydrofolate deformylase — —
Paraburkholderia graminis OAS925 0.33 ABIE53_003033 pyridoxine 5-phosphate synthase 0.43 ABIE53_000728 formyltetrahydrofolate deformylase — —
Paraburkholderia sabiae LMG 24235 0.33 QEN71_RS04625 pyridoxine 5'-phosphate synthase 0.45 QEN71_RS33925 formyltetrahydrofolate deformylase — —
Escherichia coli ECOR38 0.33 HEPCGN_20570 pdxJ pyridoxine 5'-phosphate synthase 0.38 HEPCGN_25030 purU formyltetrahydrofolate deformylase low > 85
Escherichia coli ECRC99 0.33 KEDOAH_06795 pdxJ pyridoxine 5'-phosphate synthase 0.38 KEDOAH_25565 purU formyltetrahydrofolate deformylase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF2472 'Pyridoxine 5'-phosphate synthase (EC 2.6.99.2)' transl_table=11 0.38 GFF2756 Formyltetrahydrofolate deformylase (EC 3.5.1.10) — —
Escherichia coli Nissle 1917 0.33 ECOLIN_RS14515 pyridoxine 5'-phosphate synthase 0.38 ECOLIN_RS07460 formyltetrahydrofolate deformylase — —
Escherichia coli ECRC101 0.33 OKFHMN_21425 pdxJ pyridoxine 5'-phosphate synthase 0.38 OKFHMN_28570 purU formyltetrahydrofolate deformylase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.33 OHPLBJKB_01143 'Pyridoxine 5'-phosphate synthase' transl_table=11 0.38 OHPLBJKB_02453 Formyltetrahydrofolate deformylase low > 73
Escherichia coli ECRC62 0.33 BNILDI_11900 pdxJ pyridoxine 5'-phosphate synthase 0.38 BNILDI_18635 purU formyltetrahydrofolate deformylase — —
Escherichia coli BW25113 0.33 b2564 pdxJ pyridoxal phosphate biosynthetic protein (NCBI) 0.38 b1232 purU formyltetrahydrofolate deformylase (NCBI) low > 76
Escherichia coli ECRC98 0.33 JDDGAC_25090 pdxJ pyridoxine 5'-phosphate synthase 0.38 JDDGAC_06005 purU formyltetrahydrofolate deformylase — —
Escherichia fergusonii Becca 0.33 EFB2_01332 Pyridoxine 5'-phosphate synthase 0.38 EFB2_02694 Formyltetrahydrofolate deformylase low > 86
Escherichia coli ECOR27 0.33 NOLOHH_13100 pdxJ pyridoxine 5'-phosphate synthase 0.38 NOLOHH_20480 purU formyltetrahydrofolate deformylase — —
Escherichia coli ECRC102 0.33 NIAGMN_19195 pdxJ pyridoxine 5'-phosphate synthase 0.38 NIAGMN_27665 purU formyltetrahydrofolate deformylase — —
Escherichia coli ECRC101 0.33 MCAODC_11955 pdxJ pyridoxine 5'-phosphate synthase 0.38 MCAODC_21690 purU formyltetrahydrofolate deformylase — —
Escherichia coli BL21 0.33 ECD_02458 pyridoxine 5'-phosphate synthase 0.38 ECD_01208 formyltetrahydrofolate hydrolase — —
Acinetobacter radioresistens SK82 0.32 MPMX26_02152 Pyridoxine 5'-phosphate synthase 0.44 MPMX26_00378 Formyltetrahydrofolate deformylase — —
Dickeya dianthicola ME23 0.32 DZA65_RS16885 pyridoxine 5'-phosphate synthase 0.38 DZA65_RS10810 formyltetrahydrofolate deformylase low > 75
Dickeya dianthicola 67-19 0.32 HGI48_RS15805 pyridoxine 5'-phosphate synthase 0.38 HGI48_RS10335 formyltetrahydrofolate deformylase low > 71
Klebsiella michiganensis M5al 0.32 BWI76_RS21305 pyridoxine 5'-phosphate synthase 0.38 BWI76_RS17290 formyltetrahydrofolate deformylase — —
Pseudomonas stutzeri RCH2 0.32 Psest_3089 pyridoxine 5'-phosphate synthase 0.46 Psest_3178 formyltetrahydrofolate deformylase — —
Enterobacter sp. TBS_079 0.31 MPMX20_03435 Pyridoxine 5'-phosphate synthase 0.38 MPMX20_02596 Formyltetrahydrofolate deformylase low > 85
Erwinia tracheiphila SCR3 0.31 LU632_RS15370 pdxJ pyridoxine 5'-phosphate synthase 0.37 LU632_RS12940 purU formyltetrahydrofolate deformylase — —
Enterobacter asburiae PDN3 0.31 EX28DRAFT_0082 pyridoxine 5'-phosphate synthase 0.38 EX28DRAFT_0858 formyltetrahydrofolate deformylase — —
Pantoea sp. MT58 0.31 IAI47_04895 pyridoxine 5'-phosphate synthase 0.38 IAI47_09010 formyltetrahydrofolate deformylase 0.73 17
Dickeya dadantii 3937 0.31 DDA3937_RS15720 pyridoxine 5'-phosphate synthase 0.38 DDA3937_RS10325 formyltetrahydrofolate deformylase 0.70 42
Vibrio cholerae E7946 ATCC 55056 0.31 CSW01_12440 pyridoxine 5'-phosphate synthase 0.38 CSW01_09940 formyltetrahydrofolate deformylase — —
Pectobacterium carotovorum WPP14 0.31 HER17_RS05830 pyridoxine 5'-phosphate synthase 0.39 HER17_RS11065 formyltetrahydrofolate deformylase low > 75
Dechlorosoma suillum PS 0.31 Dsui_2463 pyridoxine 5''-phosphate synthase 0.45 Dsui_0762 formyltetrahydrofolate deformylase — —
Rhodopseudomonas palustris CGA009 0.31 TX73_013960 pyridoxine 5'-phosphate synthase 0.41 TX73_020890 formyltetrahydrofolate deformylase 0.33 82
Rahnella sp. WP5 0.30 EX31_RS21850 pyridoxine 5'-phosphate synthase 0.38 EX31_RS10115 formyltetrahydrofolate deformylase low > 89
Pseudomonas putida KT2440 0.30 PP_1436 Pyridoxine 5'-phosphate synthase 0.44 PP_1367 formyltetrahydrofolate hydrolase — —
Pseudomonas simiae WCS417 0.30 PS417_05205 pyridoxine 5'-phosphate synthase 0.45 PS417_22565 formyltetrahydrofolate deformylase — —
Azospirillum brasilense Sp245 0.30 AZOBR_RS22055 pyridoxine 5'-phosphate synthase 0.43 AZOBR_RS21685 formyltetrahydrofolate deformylase — —
Serratia liquefaciens MT49 0.30 IAI46_19535 pyridoxine 5'-phosphate synthase 0.38 IAI46_14265 formyltetrahydrofolate deformylase — —
Pseudomonas sp. RS175 0.30 PFR28_03520 'Pyridoxine 5'-phosphate synthase' transl_table=11 0.45 PFR28_03439 Formyltetrahydrofolate deformylase — —
Azospirillum sp. SherDot2 0.30 MPMX19_00840 Pyridoxine 5'-phosphate synthase 0.43 MPMX19_04425 Formyltetrahydrofolate deformylase — —
Pseudomonas fluorescens FW300-N1B4 0.30 Pf1N1B4_889 Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) 0.46 Pf1N1B4_665 Formyltetrahydrofolate deformylase (EC 3.5.1.10) — —
Ralstonia solanacearum GMI1000 0.30 RS_RS05280 pyridoxine 5'-phosphate synthase 0.41 RS_RS09460 formyltetrahydrofolate deformylase — —
Herbaspirillum seropedicae SmR1 0.30 HSERO_RS09675 pyridoxine 5'-phosphate synthase 0.40 HSERO_RS07970 formyltetrahydrofolate deformylase — —
Ralstonia solanacearum PSI07 0.30 RPSI07_RS18960 pyridoxine 5'-phosphate synthase 0.40 RPSI07_RS15065 formyltetrahydrofolate deformylase — —
Pseudomonas fluorescens FW300-N2C3 0.30 AO356_17510 pyridoxine 5'-phosphate synthase 0.44 AO356_17895 formyltetrahydrofolate deformylase — —
Pseudomonas fluorescens FW300-N2E3 0.30 AO353_04495 pyridoxine 5'-phosphate synthase 0.45 AO353_03710 formyltetrahydrofolate deformylase — —
Pseudomonas fluorescens SBW25 0.30 PFLU_RS05275 pyridoxine 5'-phosphate synthase 0.45 PFLU_RS24200 formyltetrahydrofolate deformylase — —
Pseudomonas fluorescens SBW25-INTG 0.30 PFLU_RS05275 pyridoxine 5'-phosphate synthase 0.45 PFLU_RS24200 formyltetrahydrofolate deformylase — —
Pseudomonas fluorescens GW456-L13 0.30 PfGW456L13_4837 Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) 0.45 PfGW456L13_1825 Formyltetrahydrofolate deformylase (EC 3.5.1.10) — —
Pseudomonas fluorescens FW300-N2E2 0.30 Pf6N2E2_5429 Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) 0.45 Pf6N2E2_5508 Formyltetrahydrofolate deformylase (EC 3.5.1.10) — —
Pseudomonas sp. S08-1 0.30 OH686_20095 pyridoxine 5'-phosphate synthase 0.45 OH686_18295 formyltetrahydrofolate deformylase — —
Desulfovibrio vulgaris Hildenborough JW710 0.29 DVU1908 pdxJ pyridoxal phosphate biosynthetic protein PdxJ (TIGR) 0.44 DVU1540 purU formyltetrahydrofolate deformylase (TIGR) low > 55
Ralstonia solanacearum UW163 0.29 UW163_RS11965 pyridoxine 5'-phosphate synthase 0.40 UW163_RS11420 formyltetrahydrofolate deformylase — —
Ralstonia solanacearum IBSBF1503 0.29 RALBFv3_RS14500 pyridoxine 5'-phosphate synthase 0.40 RALBFv3_RS02305 formyltetrahydrofolate deformylase — —
Dinoroseobacter shibae DFL-12 0.29 Dshi_0196 pyridoxal phosphate biosynthetic protein PdxJ (RefSeq) 0.39 Dshi_2111 formyltetrahydrofolate deformylase (RefSeq) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.29 Psyr_3948 pyridoxine 5'-phosphate synthase 0.45 Psyr_4018 Formyltetrahydrofolate deformylase — —
Alteromonas macleodii MIT1002 0.29 MIT1002_00791 Pyridoxine 5'-phosphate synthase 0.40 MIT1002_00404 Formyltetrahydrofolate deformylase — —
Pseudomonas syringae pv. syringae B728a 0.29 Psyr_3948 pyridoxine 5'-phosphate synthase 0.45 Psyr_4018 Formyltetrahydrofolate deformylase — —
Synechococcus elongatus PCC 7942 0.28 Synpcc7942_1194 pdxJ pyridoxal phosphate biosynthetic protein PdxJ 0.55 Synpcc7942_1008 purU formyltetrahydrofolate deformylase — —
Desulfovibrio vulgaris Miyazaki F 0.28 DvMF_0281 pyridoxine 5'-phosphate synthase (RefSeq) 0.43 DvMF_0189 purU formyltetrahydrofolate deformylase (RefSeq) low > 51
Shewanella amazonensis SB2B 0.28 Sama_0883 pyridoxine 5'-phosphate synthase (RefSeq) 0.35 Sama_1134 purU formyltetrahydrofolate deformylase (RefSeq) — —
Shewanella oneidensis MR-1 0.28 SO1351 pdxJ pyridoxal phosphate biosynthetic protein PdxJ (NCBI ptt file) 0.36 SO1624 purU formyltetrahydrofolate deformylase (NCBI ptt file) — —
Shewanella loihica PV-4 0.27 Shew_1057 pyridoxal phosphate biosynthetic protein PdxJ (RefSeq) 0.36 Shew_2640 purU formyltetrahydrofolate deformylase (RefSeq) — —
Shewanella sp. ANA-3 0.27 Shewana3_3023 pyridoxine 5'-phosphate synthase (RefSeq) 0.36 Shewana3_2821 purU formyltetrahydrofolate deformylase (RefSeq) — —
Bosea sp. OAE506 0.27 ABIE41_RS19905 pyridoxine 5'-phosphate synthase 0.41 ABIE41_RS02615 formyltetrahydrofolate deformylase low > 77
Rhodospirillum rubrum S1H 0.27 Rru_A1854 Pyridoxal phosphate biosynthetic protein PdxJ (NCBI) 0.43 Rru_A0556 Formyltetrahydrofolate deformylase (NCBI) 0.69 8
Caulobacter crescentus NA1000 Δfur 0.27 CCNA_01626 pyridoxal phosphate biosynthetic protein pdxJ 0.39 CCNA_03745 formyltetrahydrofolate deformylase — —
Sphingomonas koreensis DSMZ 15582 0.27 Ga0059261_2011 pyridoxine 5'-phosphate synthase 0.40 Ga0059261_1821 formyltetrahydrofolate deformylase (EC 3.5.1.10) — —
Caulobacter crescentus NA1000 0.27 CCNA_01626 pyridoxal phosphate biosynthetic protein pdxJ 0.39 CCNA_03745 formyltetrahydrofolate deformylase — —
Castellaniella sp019104865 MT123 0.27 ABCV34_RS04215 pyridoxine 5'-phosphate synthase 0.42 ABCV34_RS00645 formyltetrahydrofolate deformylase — —
Magnetospirillum magneticum AMB-1 0.27 AMB_RS11405 pyridoxine 5'-phosphate synthase 0.41 AMB_RS18080 formyltetrahydrofolate deformylase — —
Ralstonia sp. UNC404CL21Col 0.26 ABZR87_RS10220 pyridoxine 5'-phosphate synthase 0.40 ABZR87_RS14235 formyltetrahydrofolate deformylase — —

Not shown: 10 genomes with orthologs for BT3918 only; 1 genomes with orthologs for BT1381 only