| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Bacteroides thetaiotaomicron VPI-5482 | 1.0 | BT1336 | | putative translation initiation inhibitor (NCBI ptt file) | 1.0 | BT1381 | | formyltetrahydrofolate deformylase (NCBI ptt file) | 0.73 | 3 |
| Bacteroides ovatus ATCC 8483 | 0.96 | BACOVA_00589 | | putative endoribonuclease L-PSP | 0.99 | BACOVA_00222 | | formyltetrahydrofolate deformylase | 0.67 | 13 |
| Bacteroides stercoris CC31F | 0.88 | HMPREF1181_RS10885 | | RidA family protein | 0.89 | HMPREF1181_RS11085 | | formyltetrahydrofolate deformylase | 0.50 | 21 |
| Phocaeicola vulgatus CL09T03C04 | 0.71 | HMPREF1058_RS18400 | | RidA family protein | 0.92 | HMPREF1058_RS06160 | | formyltetrahydrofolate deformylase | 0.69 | 4 |
| Phocaeicola dorei CL03T12C01 | 0.70 | ABI39_RS14715 | | RidA family protein | 0.91 | ABI39_RS19915 | | formyltetrahydrofolate deformylase | low | > 72 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.55 | GFF928 | | Endoribonuclease L-PSP | 0.38 | GFF2756 | | Formyltetrahydrofolate deformylase (EC 3.5.1.10) | low | > 78 |
| Pantoea sp. MT58 | 0.55 | IAI47_16870 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.38 | IAI47_09010 | | formyltetrahydrofolate deformylase | 0.82 | 47 |
| Klebsiella michiganensis M5al | 0.54 | BWI76_RS02985 | | reactive intermediate/imine deaminase | 0.38 | BWI76_RS17290 | | formyltetrahydrofolate deformylase | low | > 92 |
| Dickeya dianthicola ME23 | 0.54 | DZA65_RS01960 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.38 | DZA65_RS10810 | | formyltetrahydrofolate deformylase | low | > 75 |
| Dickeya dianthicola 67-19 | 0.54 | HGI48_RS01890 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.38 | HGI48_RS10335 | | formyltetrahydrofolate deformylase | — | — |
| Enterobacter sp. TBS_079 | 0.54 | MPMX20_00542 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.38 | MPMX20_02596 | | Formyltetrahydrofolate deformylase | 0.34 | 50 |
| Enterobacter asburiae PDN3 | 0.53 | EX28DRAFT_3444 | | reactive intermediate/imine deaminase | 0.38 | EX28DRAFT_0858 | | formyltetrahydrofolate deformylase | low | > 76 |
| Dickeya dadantii 3937 | 0.53 | DDA3937_RS01915 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.38 | DDA3937_RS10325 | | formyltetrahydrofolate deformylase | low | > 74 |
| Rahnella sp. WP5 | 0.53 | EX31_RS12775 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.38 | EX31_RS10115 | | formyltetrahydrofolate deformylase | low | > 89 |
| Escherichia coli ECRC102 | 0.52 | NIAGMN_09725 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.38 | NIAGMN_27665 | purU | formyltetrahydrofolate deformylase | — | — |
| Escherichia coli ECRC62 | 0.52 | BNILDI_07375 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.38 | BNILDI_18635 | purU | formyltetrahydrofolate deformylase | — | — |
| Escherichia coli ECRC98 | 0.52 | JDDGAC_15515 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.38 | JDDGAC_06005 | purU | formyltetrahydrofolate deformylase | — | — |
| Escherichia coli BL21 | 0.52 | ECD_04111 | | enamine/imine deaminase, reaction intermediate detoxification | 0.38 | ECD_01208 | | formyltetrahydrofolate hydrolase | low | > 60 |
| Vibrio cholerae E7946 ATCC 55056 | 0.52 | CSW01_12735 | | RidA family protein | 0.38 | CSW01_09940 | | formyltetrahydrofolate deformylase | low | > 62 |
| Escherichia coli ECOR27 | 0.52 | NOLOHH_04135 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.38 | NOLOHH_20480 | purU | formyltetrahydrofolate deformylase | low | > 57 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.52 | OHPLBJKB_03791 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.38 | OHPLBJKB_02453 | | Formyltetrahydrofolate deformylase | low | > 73 |
| Escherichia coli ECOR38 | 0.52 | HEPCGN_10070 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.38 | HEPCGN_25030 | purU | formyltetrahydrofolate deformylase | low | > 85 |
| Escherichia coli BW25113 | 0.52 | b4243 | yjgF | orf, hypothetical protein (VIMSS) | 0.38 | b1232 | purU | formyltetrahydrofolate deformylase (NCBI) | low | > 76 |
| Escherichia coli Nissle 1917 | 0.52 | ECOLIN_RS24615 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.38 | ECOLIN_RS07460 | | formyltetrahydrofolate deformylase | low | > 52 |
| Escherichia coli ECRC101 | 0.52 | OKFHMN_11875 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.38 | OKFHMN_28570 | purU | formyltetrahydrofolate deformylase | — | — |
| Escherichia coli ECRC99 | 0.52 | KEDOAH_16280 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.38 | KEDOAH_25565 | purU | formyltetrahydrofolate deformylase | — | — |
| Escherichia coli ECRC101 | 0.52 | MCAODC_02380 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.38 | MCAODC_21690 | purU | formyltetrahydrofolate deformylase | — | — |
| Escherichia fergusonii Becca | 0.52 | EFB2_04290 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.38 | EFB2_02694 | | Formyltetrahydrofolate deformylase | low | > 86 |
| Erwinia tracheiphila SCR3 | 0.51 | LU632_RS20960 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.37 | LU632_RS12940 | purU | formyltetrahydrofolate deformylase | low | > 74 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.51 | DVU2647 | | endoribonuclease, L-PSP family (TIGR) | 0.44 | DVU1540 | purU | formyltetrahydrofolate deformylase (TIGR) | low | > 55 |
| Pectobacterium carotovorum WPP14 | 0.50 | HER17_RS19520 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.39 | HER17_RS11065 | | formyltetrahydrofolate deformylase | low | > 75 |
| Pseudomonas syringae pv. syringae B728a | 0.49 | Psyr_0208 | | endoribonuclease L-PSP | 0.45 | Psyr_4018 | | Formyltetrahydrofolate deformylase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.49 | Psyr_0208 | | endoribonuclease L-PSP | 0.45 | Psyr_4018 | | Formyltetrahydrofolate deformylase | 0.50 | 10 |
| Synechococcus elongatus PCC 7942 | 0.49 | Synpcc7942_0972 | | YjgF-like protein | 0.55 | Synpcc7942_1008 | purU | formyltetrahydrofolate deformylase | low | > 38 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.49 | CA265_RS22825 | | reactive intermediate/imine deaminase | 0.31 | CA265_RS21155 | | formyltetrahydrofolate deformylase | low | > 88 |
| Serratia liquefaciens MT49 | 0.48 | IAI46_02265 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.38 | IAI46_14265 | | formyltetrahydrofolate deformylase | low | > 86 |
| Pseudomonas fluorescens FW300-N2C3 | 0.48 | AO356_12475 | | reactive intermediate/imine deaminase | 0.44 | AO356_17895 | | formyltetrahydrofolate deformylase | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.48 | ABZR88_RS17245 | | RidA family protein | 0.33 | ABZR88_RS14140 | | formyltetrahydrofolate deformylase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.48 | Pf6N2E2_4360 | | Bona fide RidA/YjgF/TdcF/RutC subgroup | 0.45 | Pf6N2E2_5508 | | Formyltetrahydrofolate deformylase (EC 3.5.1.10) | low | > 103 |
| Pseudomonas fluorescens FW300-N2E3 | 0.47 | AO353_09285 | | reactive intermediate/imine deaminase | 0.45 | AO353_03710 | | formyltetrahydrofolate deformylase | low | > 101 |
| Pseudomonas fluorescens GW456-L13 | 0.47 | PfGW456L13_779 | | Bona fide RidA/YjgF/TdcF/RutC subgroup | 0.45 | PfGW456L13_1825 | | Formyltetrahydrofolate deformylase (EC 3.5.1.10) | — | — |
| Pseudomonas fluorescens SBW25 | 0.47 | PFLU_RS29515 | | RidA family protein | 0.45 | PFLU_RS24200 | | formyltetrahydrofolate deformylase | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.47 | Pf1N1B4_2112 | | Bona fide RidA/YjgF/TdcF/RutC subgroup | 0.46 | Pf1N1B4_665 | | Formyltetrahydrofolate deformylase (EC 3.5.1.10) | — | — |
| Pseudomonas putida KT2440 | 0.47 | PP_5303 | | aminoacrylate/iminopropionate hydrolase/deaminase | 0.44 | PP_1367 | | formyltetrahydrofolate hydrolase | low | > 96 |
| Pseudomonas fluorescens SBW25-INTG | 0.47 | PFLU_RS29515 | | RidA family protein | 0.45 | PFLU_RS24200 | | formyltetrahydrofolate deformylase | — | — |
| Pseudomonas sp. RS175 | 0.47 | PFR28_04425 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.45 | PFR28_03439 | | Formyltetrahydrofolate deformylase | — | — |
| Pseudomonas simiae WCS417 | 0.47 | PS417_27835 | | endoribonuclease | 0.45 | PS417_22565 | | formyltetrahydrofolate deformylase | low | > 88 |
| Lysobacter sp. OAE881 | 0.46 | ABIE51_RS17260 | | RidA family protein | 0.37 | ABIE51_RS07700 | | formyltetrahydrofolate deformylase | low | > 62 |
| Pseudomonas sp. S08-1 | 0.46 | OH686_13545 | | RidA/YER057c/UK114 superfamily protein | 0.45 | OH686_18295 | | formyltetrahydrofolate deformylase | low | > 80 |
| Azospirillum brasilense Sp245 | 0.45 | AZOBR_RS32435 | | dfrA | 0.43 | AZOBR_RS21685 | | formyltetrahydrofolate deformylase | — | — |
| Shewanella oneidensis MR-1 | 0.45 | SO1404 | | endoribonuclease L-PSP, putative (NCBI ptt file) | 0.36 | SO1624 | purU | formyltetrahydrofolate deformylase (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.45 | Shewana3_2971 | | putative endoribonuclease L-PSP (RefSeq) | 0.36 | Shewana3_2821 | purU | formyltetrahydrofolate deformylase (RefSeq) | low | > 73 |
| Pseudomonas stutzeri RCH2 | 0.44 | Psest_3818 | | endoribonuclease L-PSP, putative | 0.46 | Psest_3178 | | formyltetrahydrofolate deformylase | low | > 67 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.44 | Xcc-8004.1205.1 | | hypothetical protein | 0.40 | Xcc-8004.395.1 | | Formyltetrahydrofolate deformylase (EC 3.5.1.10) | 0.72 | 20 |
| Dechlorosoma suillum PS | 0.43 | Dsui_0312 | | endoribonuclease L-PSP, putative | 0.45 | Dsui_0762 | | formyltetrahydrofolate deformylase | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.43 | Echvi_1327 | | endoribonuclease L-PSP, putative | 0.61 | Echvi_1543 | | formyltetrahydrofolate deformylase | low | > 79 |
| Paraburkholderia sabiae LMG 24235 | 0.42 | QEN71_RS41190 | | RidA family protein | 0.45 | QEN71_RS33925 | | formyltetrahydrofolate deformylase | — | — |
| Alteromonas macleodii MIT1002 | 0.42 | MIT1002_00109 | | Putative reactive intermediate deaminase TdcF | 0.40 | MIT1002_00404 | | Formyltetrahydrofolate deformylase | low | > 70 |
| Castellaniella sp019104865 MT123 | 0.41 | ABCV34_RS03565 | | Rid family detoxifying hydrolase | 0.42 | ABCV34_RS00645 | | formyltetrahydrofolate deformylase | — | — |
| Shewanella loihica PV-4 | 0.40 | Shew_3500 | | putative endoribonuclease L-PSP (RefSeq) | 0.36 | Shew_2640 | purU | formyltetrahydrofolate deformylase (RefSeq) | low | > 60 |
| Ralstonia solanacearum UW163 | 0.40 | UW163_RS22060 | | endoribonuclease L-PSP | 0.40 | UW163_RS11420 | | formyltetrahydrofolate deformylase | — | — |
| Acinetobacter radioresistens SK82 | 0.40 | MPMX26_02797 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.44 | MPMX26_00378 | | Formyltetrahydrofolate deformylase | low | > 36 |
| Shewanella amazonensis SB2B | 0.40 | Sama_0263 | | YjgF-like protein (RefSeq) | 0.35 | Sama_1134 | purU | formyltetrahydrofolate deformylase (RefSeq) | low | > 62 |
| Ralstonia solanacearum IBSBF1503 | 0.40 | RALBFv3_RS20925 | | endoribonuclease L-PSP | 0.40 | RALBFv3_RS02305 | | formyltetrahydrofolate deformylase | low | > 76 |
| Desulfovibrio vulgaris Miyazaki F | 0.36 | DvMF_1512 | | endoribonuclease L-PSP (RefSeq) | 0.43 | DvMF_0189 | purU | formyltetrahydrofolate deformylase (RefSeq) | — | — |
| Dinoroseobacter shibae DFL-12 | 0.35 | Dshi_0720 | | Endoribonuclease L-PSP (RefSeq) | 0.39 | Dshi_2111 | | formyltetrahydrofolate deformylase (RefSeq) | low | > 64 |
| Variovorax sp. SCN45 | 0.35 | GFF6707 | | RidA/YER057c/UK114 superfamily protein | 0.41 | GFF3790 | | Formyltetrahydrofolate deformylase (EC 3.5.1.10) | low | > 127 |
| Cupriavidus basilensis FW507-4G11 | 0.35 | RR42_RS16710 | | endoribonuclease L-PSP | 0.40 | RR42_RS13800 | | formyltetrahydrofolate deformylase | low | > 128 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.34 | H281DRAFT_03549 | | reactive intermediate/imine deaminase | 0.43 | H281DRAFT_01917 | | formyltetrahydrofolate deformylase | — | — |
| Variovorax sp. OAS795 | 0.34 | ABID97_RS26145 | | RidA family protein | 0.42 | ABID97_RS00100 | | formyltetrahydrofolate deformylase | — | — |
| Azospirillum sp. SherDot2 | 0.34 | MPMX19_04018 | | 2-aminomuconate deaminase | 0.43 | MPMX19_04425 | | Formyltetrahydrofolate deformylase | — | — |
| Paraburkholderia graminis OAS925 | 0.34 | ABIE53_004706 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.43 | ABIE53_000728 | | formyltetrahydrofolate deformylase | low | > 113 |
| Herbaspirillum seropedicae SmR1 | 0.32 | HSERO_RS05705 | | endoribonuclease L-PSP | 0.40 | HSERO_RS07970 | | formyltetrahydrofolate deformylase | low | > 78 |
| Burkholderia phytofirmans PsJN | 0.32 | BPHYT_RS34350 | | endoribonuclease L-PSP | 0.42 | BPHYT_RS02955 | | formyltetrahydrofolate deformylase | low | > 109 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.32 | GFF3622 | | Bona fide RidA/YjgF/TdcF/RutC subgroup | 0.42 | GFF2737 | | Formyltetrahydrofolate deformylase (EC 3.5.1.10) | low | > 90 |
| Agrobacterium fabrum C58 | 0.32 | Atu2498 | | hypothetical protein | 0.38 | Atu4231 | | formyltetrahydrofolate deformylase | low | > 89 |
| Sinorhizobium meliloti 1021 | 0.32 | SM_b21139 | | translation initiation inhibitors | 0.38 | SMa2141 | | formyltetrahydrofolate deformylase | low | > 103 |
| Ralstonia solanacearum GMI1000 | 0.31 | RS_RS23660 | | RidA family protein | 0.41 | RS_RS09460 | | formyltetrahydrofolate deformylase | — | — |
| Caulobacter crescentus NA1000 | 0.30 | CCNA_02886 | | RutC-family pyrimidine utilization protein C | 0.39 | CCNA_03745 | | formyltetrahydrofolate deformylase | 0.42 | 62 |
| Caulobacter crescentus NA1000 Δfur | 0.30 | CCNA_02886 | | RutC-family pyrimidine utilization protein C | 0.39 | CCNA_03745 | | formyltetrahydrofolate deformylase | low | > 67 |
| Ralstonia sp. UNC404CL21Col | 0.30 | ABZR87_RS05790 | | RidA family protein | 0.40 | ABZR87_RS14235 | | formyltetrahydrofolate deformylase | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.29 | RPSI07_RS05465 | | RidA family protein | 0.40 | RPSI07_RS15065 | | formyltetrahydrofolate deformylase | low | > 81 |
| Bosea sp. OAE506 | 0.27 | ABIE41_RS17855 | | RidA family protein | 0.41 | ABIE41_RS02615 | | formyltetrahydrofolate deformylase | low | > 77 |
| Rhizobium sp. OAE497 | 0.27 | ABIE40_RS21405 | | RidA family protein | 0.38 | ABIE40_RS00960 | | formyltetrahydrofolate deformylase | low | > 107 |
| Acidovorax sp. GW101-3H11 | 0.27 | Ac3H11_699 | | RidA/YER057c/UK114 superfamily, group 2, YoaB-like protein | 0.41 | Ac3H11_4485 | | Formyltetrahydrofolate deformylase (EC 3.5.1.10) | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.27 | Ga0059261_1670 | | Putative translation initiation inhibitor, yjgF family | 0.40 | Ga0059261_1821 | | formyltetrahydrofolate deformylase (EC 3.5.1.10) | low | > 68 |
| Rhodopseudomonas palustris CGA009 | 0.24 | TX73_018610 | | RidA family protein | 0.41 | TX73_020890 | | formyltetrahydrofolate deformylase | low | > 86 |
| Rhodospirillum rubrum S1H | 0.23 | Rru_A1174 | | Endoribonuclease L-PSP (NCBI) | 0.43 | Rru_A0556 | | Formyltetrahydrofolate deformylase (NCBI) | low | > 58 |
| Magnetospirillum magneticum AMB-1 | 0.20 | AMB_RS19400 | | RidA family protein | 0.41 | AMB_RS18080 | | formyltetrahydrofolate deformylase | low | > 64 |
Not shown: 11 genomes with orthologs for BT1336 only; 1 genomes with orthologs for BT1381 only