Conservation of cofitness between BT1009 and BT0544 in Bacteroides thetaiotaomicron VPI-5482

84 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT1009 dihydroorotate dehydrogenase (NCBI ptt file) 1.0 BT0544 ammonium transporter (NCBI ptt file) 0.27 9
Echinicola vietnamensis KMM 6221, DSM 17526 0.36 Echvi_1806 dihydroorotate dehydrogenase, subfamily 2 0.32 Echvi_1454 ammonium transporter — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.34 CA264_00865 dihydroorotate dehydrogenase (quinone) 0.15 CA264_09145 ammonia channel protein low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.34 ABZR88_RS12040 quinone-dependent dihydroorotate dehydrogenase 0.30 ABZR88_RS11465 ammonium transporter — —
Pedobacter sp. GW460-11-11-14-LB5 0.33 CA265_RS14005 dihydroorotate dehydrogenase (quinone) 0.20 CA265_RS14975 ammonia channel protein — —
Acidovorax sp. GW101-3H11 0.32 Ac3H11_4100 Dihydroorotate dehydrogenase (EC 1.3.3.1) 0.20 Ac3H11_1462 Ammonium transporter — —
Variovorax sp. OAS795 0.32 ABID97_RS14065 quinone-dependent dihydroorotate dehydrogenase 0.20 ABID97_RS20920 ammonium transporter — —
Variovorax sp. SCN45 0.32 GFF960 Dihydroorotate dehydrogenase (quinone) (EC 1.3.5.2) 0.21 GFF6676 Ammonium transporter — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.31 GFF4211 Dihydroorotate dehydrogenase (EC 1.3.3.1) 0.18 GFF1922 Ammonium transporter low > 90
Rhodanobacter denitrificans FW104-10B01 0.30 LRK54_RS15985 quinone-dependent dihydroorotate dehydrogenase 0.18 LRK54_RS08110 ammonium transporter — —
Dechlorosoma suillum PS 0.29 Dsui_2978 dihydroorotate dehydrogenase, subfamily 2 0.18 Dsui_1062 ammonia permease — —
Rhodanobacter denitrificans MT42 0.29 LRK55_RS15740 quinone-dependent dihydroorotate dehydrogenase 0.18 LRK55_RS07860 ammonium transporter — —
Pseudomonas putida KT2440 0.29 PP_2095 Dihydroorotate dehydrogenase (quinone) 0.18 PP_2106 putative Ammonium transporter — —
Dyella japonica UNC79MFTsu3.2 0.29 ABZR86_RS07450 quinone-dependent dihydroorotate dehydrogenase 0.18 ABZR86_RS09495 ammonium transporter — —
Erwinia tracheiphila SCR3 0.28 LU632_RS09955 pyrD quinone-dependent dihydroorotate dehydrogenase 0.20 LU632_RS18270 amtB ammonium transporter AmtB low > 74
Castellaniella sp019104865 MT123 0.28 ABCV34_RS07790 quinone-dependent dihydroorotate dehydrogenase 0.16 ABCV34_RS04770 ammonium transporter — —
Escherichia coli Nissle 1917 0.28 ECOLIN_RS04965 quinone-dependent dihydroorotate dehydrogenase 0.21 ECOLIN_RS02700 ammonium transporter AmtB — —
Pantoea sp. MT58 0.28 IAI47_12705 quinone-dependent dihydroorotate dehydrogenase 0.21 IAI47_14580 ammonium transporter AmtB low > 76
Escherichia fergusonii Becca 0.28 EFB2_03126 Dihydroorotate dehydrogenase (quinone) 0.21 EFB2_03606 Ammonia channel low > 86
Escherichia coli ECOR38 0.28 HEPCGN_23225 pyrD quinone-dependent dihydroorotate dehydrogenase 0.21 HEPCGN_06875 amtB ammonium transporter AmtB low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.28 GFF3236 Dihydroorotate dehydrogenase (EC 1.3.3.1) 0.21 GFF4368 Ammonium transporter low > 78
Escherichia coli ECRC101 0.28 OKFHMN_05295 pyrD quinone-dependent dihydroorotate dehydrogenase 0.21 OKFHMN_08260 amtB ammonium transporter AmtB — —
Escherichia coli ECRC98 0.28 JDDGAC_08905 pyrD quinone-dependent dihydroorotate dehydrogenase 0.21 JDDGAC_11915 amtB ammonium transporter AmtB — —
Escherichia coli ECRC102 0.28 NIAGMN_03015 pyrD quinone-dependent dihydroorotate dehydrogenase 0.21 NIAGMN_06315 amtB ammonium transporter AmtB — —
Escherichia coli ECRC101 0.28 MCAODC_24685 pyrD quinone-dependent dihydroorotate dehydrogenase 0.21 MCAODC_27485 amtB ammonium transporter AmtB — —
Dickeya dadantii 3937 0.28 DDA3937_RS12855 quinone-dependent dihydroorotate dehydrogenase 0.17 DDA3937_RS05700 ammonium transporter AmtB low > 74
Alteromonas macleodii MIT1002 0.28 MIT1002_02035 Dihydroorotate dehydrogenase (quinone) 0.25 MIT1002_00417 Ammonia transporter low > 70
Escherichia coli ECRC62 0.28 BNILDI_20015 pyrD quinone-dependent dihydroorotate dehydrogenase 0.21 BNILDI_22610 amtB ammonium transporter AmtB — —
Escherichia coli ECRC99 0.28 KEDOAH_22440 pyrD quinone-dependent dihydroorotate dehydrogenase 0.21 KEDOAH_19705 amtB ammonium transporter AmtB — —
Escherichia coli BW25113 0.28 b0945 pyrD dihydroorotate dehydrogenase (NCBI) 0.21 b0451 amtB ammonium transporter (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.28 OHPLBJKB_02721 Dihydroorotate dehydrogenase (quinone) 0.21 OHPLBJKB_03222 Ammonia channel low > 73
Escherichia coli ECOR27 0.28 NOLOHH_21850 pyrD quinone-dependent dihydroorotate dehydrogenase 0.21 NOLOHH_01195 amtB ammonium transporter AmtB low > 57
Pseudomonas simiae WCS417 0.28 PS417_20935 dihydroorotate dehydrogenase 0.19 PS417_08635 ammonium transporter — —
Escherichia coli BL21 0.28 ECD_00949 dihydro-orotate oxidase, FMN-linked 0.21 ECD_00403 ammonium transporter low > 60
Pseudomonas fluorescens SBW25 0.28 PFLU_RS22550 quinone-dependent dihydroorotate dehydrogenase 0.20 PFLU_RS11425 ammonium transporter — —
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS22550 quinone-dependent dihydroorotate dehydrogenase 0.20 PFLU_RS11425 ammonium transporter — —
Dickeya dianthicola 67-19 0.28 HGI48_RS12925 quinone-dependent dihydroorotate dehydrogenase 0.19 HGI48_RS05745 ammonium transporter AmtB low > 71
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_09010 pyrD quinone-dependent dihydroorotate dehydrogenase 0.18 OKGIIK_14925 Ammonium transporter — —
Enterobacter sp. TBS_079 0.27 MPMX20_01596 Dihydroorotate dehydrogenase (quinone) 0.22 MPMX20_01043 Ammonia channel low > 85
Dickeya dianthicola ME23 0.27 DZA65_RS13390 quinone-dependent dihydroorotate dehydrogenase 0.19 DZA65_RS06070 ammonium transporter AmtB low > 75
Enterobacter asburiae PDN3 0.27 EX28DRAFT_1998 dihydroorotate oxidase A (EC 1.3.3.1) 0.22 EX28DRAFT_2518 ammonium transporter — —
Pseudomonas syringae pv. syringae B728a 0.27 Psyr_2106 dihydroorotate oxidase A 0.19 Psyr_2277 ammonium transporter — —
Pseudomonas stutzeri RCH2 0.27 Psest_1947 dihydroorotate dehydrogenase, subfamily 2 0.26 Psest_3771 probable ammonium transporter, marine subtype low > 67
Xanthomonas campestris pv. campestris strain 8004 0.27 Xcc-8004.3032.1 Dihydroorotate dehydrogenase (EC 1.3.3.1) 0.18 Xcc-8004.249.1 Ammonium transporter — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.27 Psyr_2106 dihydroorotate oxidase A 0.19 Psyr_2277 ammonium transporter — —
Klebsiella michiganensis M5al 0.27 BWI76_RS09910 dihydroorotate dehydrogenase (quinone) 0.21 BWI76_RS06605 ammonium transporter low > 92
Cupriavidus basilensis FW507-4G11 0.27 RR42_RS07465 dihydroorotate dehydrogenase 0.20 RR42_RS01760 ammonia channel protein — —
Burkholderia phytofirmans PsJN 0.27 BPHYT_RS08565 dihydroorotate dehydrogenase 0.19 BPHYT_RS07910 ammonium transporter low > 109
Paraburkholderia bryophila 376MFSha3.1 0.27 H281DRAFT_00743 dihydroorotate oxidase A 0.19 H281DRAFT_05071 ammonium transporter — —
Pectobacterium carotovorum WPP14 0.27 HER17_RS12005 quinone-dependent dihydroorotate dehydrogenase 0.21 HER17_RS15785 ammonium transporter AmtB low > 75
Marinobacter adhaerens HP15 0.27 HP15_1377 dihydroorotate dehydrogenase 0.25 HP15_274 ammonium/methylammonium permease low > 73
Pseudomonas sp. S08-1 0.27 OH686_03120 dihydroorotate dehydrogenase (fumarate) 0.27 OH686_13765 Ammonium transporter — —
Pseudomonas fluorescens FW300-N1B4 0.27 Pf1N1B4_3842 Dihydroorotate dehydrogenase (EC 1.3.3.1) 0.19 Pf1N1B4_243 Ammonium transporter — —
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_4095 Dihydroorotate dehydrogenase (EC 1.3.3.1) 0.18 PfGW456L13_2267 Ammonium transporter — —
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_02610 dihydroorotate dehydrogenase (quinone) 0.20 AO356_30065 ammonia channel protein — —
Pseudomonas fluorescens FW300-N2E2 0.27 Pf6N2E2_2347 Dihydroorotate dehydrogenase (EC 1.3.3.1) 0.19 Pf6N2E2_4412 Ammonium transporter — —
Paraburkholderia sabiae LMG 24235 0.27 QEN71_RS22765 quinone-dependent dihydroorotate dehydrogenase 0.20 QEN71_RS23255 ammonium transporter — —
Pseudomonas fluorescens FW300-N2E3 0.27 AO353_00780 dihydroorotate dehydrogenase (quinone) 0.19 AO353_19220 ammonium transporter — —
Paraburkholderia graminis OAS925 0.27 ABIE53_001954 dihydroorotate dehydrogenase 0.20 ABIE53_001796 Amt family ammonium transporter — —
Pseudomonas sp. RS175 0.27 PFR28_01054 Dihydroorotate dehydrogenase (quinone) 0.19 PFR28_04382 Ammonia channel — —
Ralstonia sp. UNC404CL21Col 0.26 ABZR87_RS13360 quinone-dependent dihydroorotate dehydrogenase 0.19 ABZR87_RS06700 ammonium transporter — —
Azospirillum sp. SherDot2 0.26 MPMX19_02083 Dihydroorotate dehydrogenase (quinone) 0.21 MPMX19_02223 Ammonia channel — —
Vibrio cholerae E7946 ATCC 55056 0.26 CSW01_07490 dihydroorotate dehydrogenase (quinone) 0.28 CSW01_03200 ammonium transporter low > 62
Serratia liquefaciens MT49 0.26 IAI46_08805 quinone-dependent dihydroorotate dehydrogenase 0.20 IAI46_05085 ammonium transporter AmtB low > 86
Ralstonia solanacearum IBSBF1503 0.26 RALBFv3_RS01570 quinone-dependent dihydroorotate dehydrogenase 0.20 RALBFv3_RS10850 ammonia channel protein — —
Ralstonia solanacearum UW163 0.26 UW163_RS14880 quinone-dependent dihydroorotate dehydrogenase 0.20 UW163_RS02730 ammonia channel protein — —
Rahnella sp. WP5 0.26 EX31_RS18095 quinone-dependent dihydroorotate dehydrogenase 0.20 EX31_RS22320 ammonium transporter AmtB low > 89
Herbaspirillum seropedicae SmR1 0.26 HSERO_RS16155 dihydroorotate dehydrogenase 0.20 HSERO_RS02900 ammonium transporter — —
Ralstonia solanacearum GMI1000 0.26 RS_RS08160 dihydroorotate dehydrogenase (quinone) 0.20 RS_RS01690 ammonium transporter — —
Sphingomonas koreensis DSMZ 15582 0.25 Ga0059261_1468 dihydroorotate oxidase A (EC 1.3.3.1) 0.18 Ga0059261_2256 ammonium transporter — —
Ralstonia solanacearum PSI07 0.25 RPSI07_RS15920 quinone-dependent dihydroorotate dehydrogenase 0.20 RPSI07_RS22460 ammonia channel protein — —
Acinetobacter radioresistens SK82 0.25 MPMX26_01120 Dihydroorotate dehydrogenase (quinone) 0.22 MPMX26_00674 Ammonia channel low > 36
Shewanella sp. ANA-3 0.25 Shewana3_1786 dihydroorotate dehydrogenase 2 (RefSeq) 0.29 Shewana3_3531 Rh family protein/ammonium transporter (RefSeq) low > 73
Rhodospirillum rubrum S1H 0.25 Rru_A0514 Dihydroorotate dehydrogenase 2 (NCBI) 0.21 Rru_A1129 Ammonium transporter (NCBI) low > 58
Synechococcus elongatus PCC 7942 0.25 Synpcc7942_0290 pyrD dihydroorotate dehydrogenase 2 0.37 Synpcc7942_0442 amt1 ammonium transporter — —
Shewanella loihica PV-4 0.25 Shew_1810 dihydroorotate dehydrogenase 2 (RefSeq) 0.29 Shew_0847 Rh family protein/ammonium transporter (RefSeq) low > 60
Shewanella oneidensis MR-1 0.25 SO2592 pyrD dihydroorotate dehydrogenase (NCBI ptt file) 0.29 SO0760 amt ammonium transporter (NCBI ptt file) low > 76
Lysobacter sp. OAE881 0.25 ABIE51_RS13725 quinone-dependent dihydroorotate dehydrogenase 0.20 ABIE51_RS01435 ammonium transporter — —
Brevundimonas sp. GW460-12-10-14-LB2 0.24 A4249_RS00280 quinone-dependent dihydroorotate dehydrogenase 0.17 A4249_RS09990 ammonium transporter — —
Azospirillum brasilense Sp245 0.24 AZOBR_RS13520 dihydroorotate dehydrogenase 0.20 AZOBR_RS00845 ammonia channel protein low > 97
Shewanella amazonensis SB2B 0.24 Sama_1593 dihydroorotate dehydrogenase 2 (RefSeq) 0.28 Sama_0651 Rh-like protein/ammonium transporter (RefSeq) low > 62
Mycobacterium tuberculosis H37Rv 0.23 Rv2139 Probable dihydroorotate dehydrogenase PyrD 0.14 Rv2920c Probable ammonium-transport integral membrane protein Amt — —
Caulobacter crescentus NA1000 Δfur 0.22 CCNA_00562 dihydroorotate dehydrogenase 0.17 CCNA_01399 ammonium transporter/methylammonium transporter low > 67
Caulobacter crescentus NA1000 0.22 CCNA_00562 dihydroorotate dehydrogenase 0.17 CCNA_01399 ammonium transporter/methylammonium transporter low > 66
Bifidobacterium breve UCC2003 0.14 BBR_RS12895 quinone-dependent dihydroorotate dehydrogenase 0.15 BBR_RS11515 ammonium transporter low > 34

Not shown: 1 genomes with orthologs for BT1009 only; 16 genomes with orthologs for BT0544 only