Conservation of cofitness between SO2563 and SO3249 in Shewanella oneidensis MR-1

89 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella oneidensis MR-1 1.0 SO2563 metallo-beta-lactamase family protein (NCBI ptt file) 1.0 SO3249 flgC flagellar basal-body rod protein FlgC (NCBI ptt file) 0.36 15
Shewanella sp. ANA-3 0.81 Shewana3_2369 beta-lactamase domain-containing protein (RefSeq) 0.91 Shewana3_1322 flgC flagellar basal body rod protein FlgC (RefSeq) low > 73
Shewanella loihica PV-4 0.49 Shew_2114 hydroxyacylglutathione hydrolase (RefSeq) 0.87 Shew_1346 flgC flagellar basal body rod protein FlgC (RefSeq) — —
Ralstonia solanacearum GMI1000 0.45 RS_RS07605 hydroxyacylglutathione hydrolase 0.42 RS_RS18800 flagellar basal body rod protein FlgC low > 80
Ralstonia solanacearum PSI07 0.45 RPSI07_RS15230 hydroxyacylglutathione hydrolase 0.42 RPSI07_RS01395 flagellar basal body rod protein FlgC low > 81
Ralstonia solanacearum UW163 0.44 UW163_RS15525 hydroxyacylglutathione hydrolase 0.44 UW163_RS17450 flagellar basal body rod protein FlgC — —
Ralstonia solanacearum IBSBF1503 0.44 RALBFv3_RS02215 hydroxyacylglutathione hydrolase 0.44 RALBFv3_RS21735 flagellar basal body rod protein FlgC low > 76
Alteromonas macleodii MIT1002 0.43 MIT1002_02494 Hydroxyacylglutathione hydrolase 0.62 MIT1002_01040 Putative proximal rod protein low > 70
Vibrio cholerae E7946 ATCC 55056 0.43 CSW01_11395 hydroxyacylglutathione hydrolase 0.65 CSW01_11220 flagellar basal body rod protein FlgC low > 62
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS04760 hydroxyacylglutathione hydrolase 0.44 QEN71_RS28915 flagellar basal body rod protein FlgC low > 153
Cupriavidus basilensis FW507-4G11 0.43 RR42_RS13570 hydroxyacylglutathione hydrolase 0.44 RR42_RS35720 flagellar basal body rod protein FlgC low > 128
Paraburkholderia graminis OAS925 0.43 ABIE53_003007 hydroxyacylglutathione hydrolase 0.38 ABIE53_000101 flagellar basal-body rod protein FlgC low > 113
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS14210 hydroxyacylglutathione hydrolase 0.38 BPHYT_RS18890 flagellar basal body rod protein FlgC low > 109
Herbaspirillum seropedicae SmR1 0.42 HSERO_RS17120 hydroxyacylglutathione hydrolase 0.47 HSERO_RS10185 flagellar basal body rod protein FlgC low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.42 GFF4257 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) 0.47 GFF1414 Flagellar basal-body rod protein FlgC low > 90
Acidovorax sp. GW101-3H11 0.42 Ac3H11_478 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) 0.46 Ac3H11_1376 Flagellar basal-body rod protein FlgC low > 79
Ralstonia sp. UNC404CL21Col 0.42 ABZR87_RS14165 hydroxyacylglutathione hydrolase 0.44 ABZR87_RS22285 flagellar basal body rod protein FlgC low > 80
Pseudomonas putida KT2440 0.42 PP_4144 Hydroxyacylglutathione hydrolase 0.60 PP_4390 flagellar basal-body rod protein FlgC low > 96
Pseudomonas sp. BP01 0.41 JOY50_RS13455 gloB hydroxyacylglutathione hydrolase 0.59 JOY50_RS00790 flgC flagellar basal body rod protein FlgC low > 84
Variovorax sp. SCN45 0.41 GFF1118 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) 0.44 GFF5716 Flagellar basal-body rod protein FlgC low > 127
Paraburkholderia bryophila 376MFSha3.1 0.41 H281DRAFT_04399 hydroxyacylglutathione hydrolase 0.38 H281DRAFT_05763 flagellar basal-body rod protein FlgC low > 103
Shewanella amazonensis SB2B 0.41 Sama_1884 hydroxyacylglutathione hydrolase (RefSeq) 0.87 Sama_2317 flgC flagellar basal body rod protein FlgC (RefSeq) low > 62
Pseudomonas sp. S08-1 0.41 OH686_03580 hydroxyacylglutathione hydrolase 0.57 OH686_02970 flagellar basal-body rod protein FlgC low > 80
Pseudomonas aeruginosa PA14 0.41 IKLFDK_08815 hydroxyacylglutathione hydrolase 0.58 IKLFDK_04950 flagellar basal-body rod protein FlgC low > 101
Dechlorosoma suillum PS 0.41 Dsui_2484 hydroxyacylglutathione hydrolase 0.47 Dsui_1733 flagellar basal-body rod protein FlgC low > 51
Pseudomonas sp. SVBP6 0.41 COO64_RS19250 gloB hydroxyacylglutathione hydrolase 0.59 COO64_RS21395 flgC flagellar basal body rod protein FlgC low > 93
Marinobacter adhaerens HP15 0.40 HP15_1805 hydroxyacylglutathione hydrolase 0.55 HP15_1468 flagellar basal-body rod protein FlgC-like protein low > 73
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS12910 hydroxyacylglutathione hydrolase 0.56 PFLU_RS23175 flagellar basal body rod protein FlgC low > 109
Pseudomonas fluorescens SBW25 0.40 PFLU_RS12910 hydroxyacylglutathione hydrolase 0.56 PFLU_RS23175 flagellar basal body rod protein FlgC low > 109
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_23490 hydroxyacylglutathione hydrolase 0.58 AO353_02855 flagellar basal-body rod protein FlgC low > 101
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_4596 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) 0.59 Pf1N1B4_3473 Flagellar basal-body rod protein FlgC low > 87
Pseudomonas sp. DMC3 0.40 GFF1022 Hydroxyacylglutathione hydrolase GloB 0.58 GFF4849 Flagellar basal-body rod protein FlgC low > 89
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_24480 hydroxyacylglutathione hydrolase 0.57 AO356_18920 flagellar basal-body rod protein FlgC low > 104
Pseudomonas syringae pv. syringae B728a 0.39 Psyr_1761 Hydroxyacylglutathione hydrolase 0.61 Psyr_3480 Flagellar basal-body rod protein FlgC low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.39 Psyr_1761 Hydroxyacylglutathione hydrolase 0.61 Psyr_3480 Flagellar basal-body rod protein FlgC low > 86
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_587 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) 0.57 Pf6N2E2_5695 Flagellar basal-body rod protein FlgC low > 103
Pectobacterium carotovorum WPP14 0.38 HER17_RS05455 hydroxyacylglutathione hydrolase 0.45 HER17_RS08170 flagellar basal body rod protein FlgC low > 75
Pseudomonas sp. RS175 0.38 PFR28_01552 Hydroxyacylglutathione hydrolase GloB 0.57 PFR28_03253 Flagellar basal-body rod protein FlgC low > 88
Pseudomonas simiae WCS417 0.38 PS417_12220 hydroxyacylglutathione hydrolase 0.55 PS417_21565 flagellar basal body rod protein FlgC 0.27 28
Pseudomonas stutzeri RCH2 0.38 Psest_2071 hydroxyacylglutathione hydrolase 0.52 Psest_2967 flagellar basal-body rod protein FlgC low > 67
Dyella japonica UNC79MFTsu3.2 0.38 ABZR86_RS07285 hydroxyacylglutathione hydrolase 0.54 ABZR86_RS20080 flagellar basal body rod protein FlgC low > 74
Castellaniella sp019104865 MT123 0.38 ABCV34_RS10485 hydroxyacylglutathione hydrolase 0.45 ABCV34_RS05765 flagellar basal body rod protein FlgC low > 48
Azospirillum brasilense Sp245 0.37 AZOBR_RS20450 hydroxyacylglutathione hydrolase 0.27 AZOBR_RS29935 flagellar basal-body rod protein FlgC low > 97
Pseudomonas fluorescens GW456-L13 0.37 PfGW456L13_3340 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) 0.58 PfGW456L13_2002 Flagellar basal-body rod protein FlgC low > 87
Xanthomonas campestris pv. campestris strain 8004 0.36 Xcc-8004.4036.1 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) 0.45 Xcc-8004.2779.1 Flagellar basal-body rod protein FlgC low > 74
Lysobacter sp. OAE881 0.36 ABIE51_RS14105 hydroxyacylglutathione hydrolase 0.46 ABIE51_RS16675 flagellar basal body rod protein FlgC low > 62
Dickeya dadantii 3937 0.36 DDA3937_RS16060 hydroxyacylglutathione hydrolase 0.45 DDA3937_RS13475 flagellar basal body rod protein FlgC low > 74
Rhodanobacter denitrificans MT42 0.36 LRK55_RS16490 hydroxyacylglutathione hydrolase 0.53 LRK55_RS13150 flagellar basal body rod protein FlgC low > 63
Pantoea sp. MT58 0.36 IAI47_15340 hydroxyacylglutathione hydrolase 0.43 IAI47_12160 flagellar basal body rod protein FlgC low > 76
Rhodanobacter denitrificans FW104-10B01 0.36 LRK54_RS16765 hydroxyacylglutathione hydrolase 0.53 LRK54_RS13410 flagellar basal body rod protein FlgC low > 59
Azospirillum sp. SherDot2 0.36 MPMX19_06029 Hydroxyacylglutathione hydrolase GloB 0.30 MPMX19_00863 Flagellar basal-body rod protein FlgC low > 112
Enterobacter sp. TBS_079 0.35 MPMX20_00897 Hydroxyacylglutathione hydrolase GloB 0.45 MPMX20_01753 Flagellar basal-body rod protein FlgC low > 85
Rhodanobacter sp000427505 FW510-R12 0.35 LRK53_RS12105 hydroxyacylglutathione hydrolase 0.52 LRK53_RS15170 flagellar basal body rod protein FlgC low > 60
Enterobacter asburiae PDN3 0.35 EX28DRAFT_2682 hydroxyacylglutathione hydrolase 0.44 EX28DRAFT_1858 flagellar basal-body rod protein FlgC low > 76
Erwinia amylovora T8 0.35 OLJFJH_18640 hydroxyacylglutathione hydrolase 0.43 OLJFJH_10050 flagellar basal body rod protein FlgC low > 58
Rhodanobacter sp. FW510-T8 0.35 OKGIIK_08000 gloB hydroxyacylglutathione hydrolase 0.51 OKGIIK_02655 flgC flagellar basal body rod protein FlgC low > 52
Escherichia fergusonii Becca 0.34 EFB2_03831 Hydroxyacylglutathione hydrolase GloB 0.44 EFB2_02900 Flagellar basal-body rod protein FlgC low > 86
Escherichia coli Nissle 1917 0.34 ECOLIN_RS01160 hydroxyacylglutathione hydrolase 0.44 ECOLIN_RS06220 flagellar basal body rod protein FlgC low > 55
Erwinia tracheiphila SCR3 0.33 LU632_RS01080 gloB hydroxyacylglutathione hydrolase 0.41 LU632_RS10400 flgC flagellar basal body rod protein FlgC low > 74
Serratia liquefaciens MT49 0.33 IAI46_04135 hydroxyacylglutathione hydrolase 0.45 IAI46_15955 flagellar basal body rod protein FlgC low > 86
Dickeya dianthicola ME23 0.33 DZA65_RS17265 hydroxyacylglutathione hydrolase 0.45 DZA65_RS14005 flagellar basal body rod protein FlgC low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.33 OHPLBJKB_03449 Hydroxyacylglutathione hydrolase GloB 0.44 OHPLBJKB_02591 Flagellar basal-body rod protein FlgC low > 73
Dickeya dianthicola 67-19 0.33 HGI48_RS16180 hydroxyacylglutathione hydrolase 0.45 HGI48_RS13520 flagellar basal body rod protein FlgC low > 71
Escherichia coli ECOR38 0.33 HEPCGN_07920 gloB hydroxyacylglutathione hydrolase 0.44 HEPCGN_23820 flgC flagellar basal body rod protein FlgC low > 87
Escherichia coli ECRC100 0.33 OKFHMN_09980 gloB hydroxyacylglutathione hydrolase 0.44 OKFHMN_03670 flgC flagellar basal body rod protein FlgC low > 80
Escherichia coli ECRC101 0.33 MCAODC_00495 gloB hydroxyacylglutathione hydrolase 0.44 MCAODC_23030 flgC flagellar basal body rod protein FlgC low > 87
Escherichia coli ECRC98 0.33 JDDGAC_13575 gloB hydroxyacylglutathione hydrolase 0.44 JDDGAC_07330 flgC flagellar basal body rod protein FlgC low > 86
Escherichia coli ECRC99 0.33 KEDOAH_18175 gloB hydroxyacylglutathione hydrolase 0.44 KEDOAH_24085 flgC flagellar basal body rod protein FlgC — —
Escherichia coli ECRC102 0.33 NIAGMN_07830 gloB hydroxyacylglutathione hydrolase 0.44 NIAGMN_24160 flgC flagellar basal body rod protein FlgC — —
Escherichia coli BW25113 0.33 b0212 gloB predicted hydroxyacylglutathione hydrolase (NCBI) 0.44 b1074 flgC flagellar basal-body rod protein C (NCBI) low > 76
Escherichia coli BL21 0.33 ECD_00205 hydroxyacylglutathione hydrolase 0.44 ECD_01070 flagellar component of cell-proximal portion of basal-body rod — —
Escherichia coli ECRC62 0.33 BNILDI_09345 gloB hydroxyacylglutathione hydrolase 0.44 BNILDI_19360 flgC flagellar basal body rod protein FlgC low > 75
Escherichia coli ECOR27 0.33 NOLOHH_02325 gloB hydroxyacylglutathione hydrolase 0.44 NOLOHH_21200 flgC flagellar basal body rod protein FlgC low > 75
Methylophilus sp. DMC18 0.33 GFF1317 Hydroxyacylglutathione hydrolase 0.51 GFF562 Flagellar basal-body rod protein FlgC low > 43
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.32 GFF4044 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) 0.45 GFF3355 Flagellar basal-body rod protein FlgC low > 78
Sphingomonas koreensis DSMZ 15582 0.31 Ga0059261_2759 hydroxyacylglutathione hydrolase 0.38 Ga0059261_2090 flagellar basal-body rod protein FlgC low > 68
Magnetospirillum magneticum AMB-1 0.31 AMB_RS21210 hydroxyacylglutathione hydrolase 0.30 AMB_RS03170 flagellar basal body rod protein FlgC low > 64
Rhodospirillum rubrum S1H 0.31 Rru_A3270 Hydroxyacylglutathione hydrolase (NCBI) 0.30 Rru_A2825 Flagellar basal-body rod protein FlgC (NCBI) low > 58
Rahnella sp. WP5 0.30 EX31_RS21200 hydroxyacylglutathione hydrolase 0.44 EX31_RS11310 flagellar basal body rod protein FlgC low > 89
Xanthobacter sp. DMC5 0.30 GFF2327 Hydroxyacylglutathione hydrolase GloB 0.27 GFF4492 Flagellar basal-body rod protein FlgC — —
Dinoroseobacter shibae DFL-12 0.29 Dshi_2691 Hydroxyacylglutathione hydrolase (RefSeq) 0.24 Dshi_3248 flagellar basal-body rod protein FlgC (RefSeq) low > 64
Rhodopseudomonas palustris CGA009 0.29 TX73_003155 hydroxyacylglutathione hydrolase 0.27 TX73_020155 flagellar basal body rod protein FlgC low > 86
Sinorhizobium meliloti 1021 0.28 SMc00708 hydroxyacylglutathione hydrolase (glyoxalase II) (GLX II) protein 0.26 SMc03028 flagellar basal body rod protein FlgC low > 103
Rhizobium sp. OAE497 0.28 ABIE40_RS17605 hydroxyacylglutathione hydrolase 0.27 ABIE40_RS02975 flagellar basal body rod protein FlgC low > 107
Agrobacterium fabrum C58 0.28 Atu3614 glyoxalase II 0.28 Atu0554 flagellar basal-body rod protein low > 89
Phaeobacter inhibens DSM 17395 0.27 PGA1_c25140 hydroxyacylglutathione hydrolase GloB 0.20 PGA1_c35820 flagellar basal-body rod protein FlgC low > 62
Caulobacter crescentus NA1000 0.24 CCNA_00553 hydroxyacylglutathione hydrolase 0.27 CCNA_01005 flagellar basal-body rod protein flgC low > 66
Caulobacter crescentus NA1000 Δfur 0.24 CCNA_00553 hydroxyacylglutathione hydrolase 0.27 CCNA_01005 flagellar basal-body rod protein flgC low > 67
Brevundimonas sp. GW460-12-10-14-LB2 0.23 A4249_RS00300 hydroxyacylglutathione hydrolase 0.27 A4249_RS16025 flagellar basal body rod protein FlgC low > 48
Bosea sp. OAE506 0.18 ABIE41_RS06025 hydroxyacylglutathione hydrolase 0.30 ABIE41_RS05520 flagellar basal body rod protein FlgC low > 77

Not shown: 6 genomes with orthologs for SO2563 only; 2 genomes with orthologs for SO3249 only