Conservation of cofitness between SO2563 and SO3215 in Shewanella oneidensis MR-1

89 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella oneidensis MR-1 1.0 SO2563 metallo-beta-lactamase family protein (NCBI ptt file) 1.0 SO3215 flhB flagellar biosynthetic protein FlhB (NCBI ptt file) 0.36 14
Shewanella sp. ANA-3 0.81 Shewana3_2369 beta-lactamase domain-containing protein (RefSeq) 0.95 Shewana3_1355 flhB flagellar biosynthesis protein FlhB (RefSeq) low > 73
Shewanella loihica PV-4 0.49 Shew_2114 hydroxyacylglutathione hydrolase (RefSeq) 0.77 Shew_1379 flhB flagellar biosynthesis protein FlhB (RefSeq) low > 60
Ralstonia solanacearum GMI1000 0.45 RS_RS07605 hydroxyacylglutathione hydrolase 0.37 RS_RS23850 flagellar type III secretion system protein FlhB low > 80
Ralstonia solanacearum PSI07 0.45 RPSI07_RS15230 hydroxyacylglutathione hydrolase 0.37 RPSI07_RS06185 flagellar type III secretion system protein FlhB low > 81
Ralstonia solanacearum UW163 0.44 UW163_RS15525 hydroxyacylglutathione hydrolase 0.36 UW163_RS21685 flagellar type III secretion system protein FlhB — —
Ralstonia solanacearum IBSBF1503 0.44 RALBFv3_RS02215 hydroxyacylglutathione hydrolase 0.36 RALBFv3_RS17465 flagellar type III secretion system protein FlhB low > 76
Alteromonas macleodii MIT1002 0.43 MIT1002_02494 Hydroxyacylglutathione hydrolase 0.48 MIT1002_01098 Flagellar biosynthetic protein FlhB low > 70
Vibrio cholerae E7946 ATCC 55056 0.43 CSW01_11395 hydroxyacylglutathione hydrolase 0.53 CSW01_10580 flagellar biosynthesis protein FlhB low > 62
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS04760 hydroxyacylglutathione hydrolase 0.35 QEN71_RS28960 flagellar biosynthesis protein FlhB low > 153
Cupriavidus basilensis FW507-4G11 0.43 RR42_RS13570 hydroxyacylglutathione hydrolase 0.39 RR42_RS35770 flagellar biosynthesis protein FlhB low > 128
Paraburkholderia graminis OAS925 0.43 ABIE53_003007 hydroxyacylglutathione hydrolase 0.36 ABIE53_000114 flagellar biosynthetic protein FlhB low > 113
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS14210 hydroxyacylglutathione hydrolase 0.36 BPHYT_RS18945 flagellar biosynthesis protein FlhB low > 109
Herbaspirillum seropedicae SmR1 0.42 HSERO_RS17120 hydroxyacylglutathione hydrolase 0.39 HSERO_RS10140 flagellar biosynthesis protein FlhB low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.42 GFF4257 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) 0.30 GFF4088 Flagellar biosynthesis protein FlhB low > 90
Acidovorax sp. GW101-3H11 0.42 Ac3H11_478 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) 0.29 Ac3H11_1385 Flagellar biosynthesis protein FlhB 0.28 22
Ralstonia sp. UNC404CL21Col 0.42 ABZR87_RS14165 hydroxyacylglutathione hydrolase 0.35 ABZR87_RS18015 flagellar biosynthesis protein FlhB low > 80
Pseudomonas putida KT2440 0.42 PP_4144 Hydroxyacylglutathione hydrolase 0.44 PP_4352 flagellin export apparatus, substrate specificity protein low > 96
Pseudomonas sp. BP01 0.41 JOY50_RS13455 gloB hydroxyacylglutathione hydrolase 0.43 JOY50_RS00605 flhB flagellar biosynthesis protein FlhB low > 84
Variovorax sp. SCN45 0.41 GFF1118 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) 0.37 GFF5770 Flagellar biosynthesis protein FlhB low > 127
Paraburkholderia bryophila 376MFSha3.1 0.41 H281DRAFT_04399 hydroxyacylglutathione hydrolase 0.35 H281DRAFT_05752 flagellar biosynthetic protein FlhB low > 103
Shewanella amazonensis SB2B 0.41 Sama_1884 hydroxyacylglutathione hydrolase (RefSeq) 0.72 Sama_2284 flhB flagellar biosynthesis protein FlhB (RefSeq) low > 62
Pseudomonas sp. S08-1 0.41 OH686_03580 hydroxyacylglutathione hydrolase 0.47 OH686_02755 flagellar biosynthetic protein FlhB low > 80
Pseudomonas aeruginosa PA14 0.41 IKLFDK_08815 hydroxyacylglutathione hydrolase 0.47 IKLFDK_06890 flagellar biosynthetic protein FlhB low > 101
Dechlorosoma suillum PS 0.41 Dsui_2484 hydroxyacylglutathione hydrolase 0.38 Dsui_1722 flagellar biosynthetic protein FlhB low > 51
Pseudomonas sp. SVBP6 0.41 COO64_RS19250 gloB hydroxyacylglutathione hydrolase 0.47 COO64_RS21200 flhB flagellar biosynthesis protein FlhB low > 93
Marinobacter adhaerens HP15 0.40 HP15_1805 hydroxyacylglutathione hydrolase 0.45 HP15_2309 flagellar biosynthesis protein FlhB low > 73
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS12910 hydroxyacylglutathione hydrolase 0.43 PFLU_RS21695 flagellar biosynthesis protein FlhB low > 109
Pseudomonas sp. DMC3 0.40 GFF1022 Hydroxyacylglutathione hydrolase GloB 0.46 GFF2466 Flagellar biosynthetic protein FlhB low > 89
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_23490 hydroxyacylglutathione hydrolase 0.40 AO353_18760 flagellar biosynthetic protein FlhB low > 101
Pseudomonas fluorescens SBW25 0.40 PFLU_RS12910 hydroxyacylglutathione hydrolase 0.43 PFLU_RS21695 flagellar biosynthesis protein FlhB low > 109
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_4596 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) 0.47 Pf1N1B4_3621 Flagellar biosynthesis protein FlhB low > 87
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_24480 hydroxyacylglutathione hydrolase 0.41 AO356_03755 flagellar biosynthetic protein FlhB low > 104
Pseudomonas syringae pv. syringae B728a 0.39 Psyr_1761 Hydroxyacylglutathione hydrolase 0.42 Psyr_3441 Flagellar biosynthetic protein FlhB low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.39 Psyr_1761 Hydroxyacylglutathione hydrolase 0.42 Psyr_3441 Flagellar biosynthetic protein FlhB low > 86
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_587 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) 0.41 Pf6N2E2_2577 Flagellar biosynthesis protein FlhB low > 103
Pseudomonas sp. RS175 0.38 PFR28_01552 Hydroxyacylglutathione hydrolase GloB 0.42 PFR28_00848 Flagellar biosynthetic protein FlhB low > 88
Pectobacterium carotovorum WPP14 0.38 HER17_RS05455 hydroxyacylglutathione hydrolase 0.39 HER17_RS08135 flagellar type III secretion system protein FlhB low > 75
Pseudomonas simiae WCS417 0.38 PS417_12220 hydroxyacylglutathione hydrolase 0.43 PS417_19725 flagellar biosynthesis protein FlhB 0.27 22
Pseudomonas stutzeri RCH2 0.38 Psest_2071 hydroxyacylglutathione hydrolase 0.48 Psest_1735 flagellar biosynthetic protein FlhB low > 67
Dyella japonica UNC79MFTsu3.2 0.38 ABZR86_RS07285 hydroxyacylglutathione hydrolase 0.35 ABZR86_RS20245 flagellar biosynthesis protein FlhB low > 74
Castellaniella sp019104865 MT123 0.38 ABCV34_RS10485 hydroxyacylglutathione hydrolase 0.40 ABCV34_RS05800 flagellar biosynthesis protein FlhB low > 48
Azospirillum brasilense Sp245 0.37 AZOBR_RS20450 hydroxyacylglutathione hydrolase 0.31 AZOBR_RS11110 flagellar biosynthesis protein low > 97
Pseudomonas fluorescens GW456-L13 0.37 PfGW456L13_3340 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) 0.46 PfGW456L13_4336 Flagellar biosynthesis protein FlhB low > 87
Xanthomonas campestris pv. campestris strain 8004 0.36 Xcc-8004.4036.1 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) 0.37 Xcc-8004.2827.1 Flagellar biosynthesis protein FlhB low > 74
Lysobacter sp. OAE881 0.36 ABIE51_RS14105 hydroxyacylglutathione hydrolase 0.37 ABIE51_RS16845 flagellar biosynthesis protein FlhB low > 62
Dickeya dadantii 3937 0.36 DDA3937_RS16060 hydroxyacylglutathione hydrolase 0.40 DDA3937_RS13510 flagellar type III secretion system protein FlhB low > 74
Pantoea sp. MT58 0.36 IAI47_15340 hydroxyacylglutathione hydrolase 0.33 IAI47_08345 flagellar type III secretion system protein FlhB low > 76
Azospirillum sp. SherDot2 0.36 MPMX19_06029 Hydroxyacylglutathione hydrolase GloB 0.30 MPMX19_00867 Flagellar biosynthetic protein FlhB low > 112
Rhodanobacter denitrificans MT42 0.36 LRK55_RS16490 hydroxyacylglutathione hydrolase 0.34 LRK55_RS13300 flagellar biosynthesis protein FlhB low > 63
Rhodanobacter denitrificans FW104-10B01 0.36 LRK54_RS16765 hydroxyacylglutathione hydrolase 0.34 LRK54_RS13560 flagellar biosynthesis protein FlhB low > 59
Enterobacter sp. TBS_079 0.35 MPMX20_00897 Hydroxyacylglutathione hydrolase GloB 0.37 MPMX20_02784 Flagellar biosynthetic protein FlhB low > 85
Rhodanobacter sp000427505 FW510-R12 0.35 LRK53_RS12105 hydroxyacylglutathione hydrolase 0.34 LRK53_RS15015 flagellar biosynthesis protein FlhB low > 60
Enterobacter asburiae PDN3 0.35 EX28DRAFT_2682 hydroxyacylglutathione hydrolase 0.36 EX28DRAFT_0680 flagellar biosynthetic protein FlhB low > 76
Erwinia amylovora T8 0.35 OLJFJH_18640 hydroxyacylglutathione hydrolase 0.34 OLJFJH_09890 flagellar biosynthesis protein FlhB low > 58
Rhodanobacter sp. FW510-T8 0.35 OKGIIK_08000 gloB hydroxyacylglutathione hydrolase 0.33 OKGIIK_02810 flhB flagellar biosynthesis protein FlhB low > 52
Escherichia fergusonii Becca 0.34 EFB2_03831 Hydroxyacylglutathione hydrolase GloB 0.34 EFB2_02063 Flagellar biosynthetic protein FlhB low > 86
Escherichia coli Nissle 1917 0.34 ECOLIN_RS01160 hydroxyacylglutathione hydrolase 0.34 ECOLIN_RS10740 flagellar biosynthesis protein FlhB low > 55
Serratia liquefaciens MT49 0.33 IAI46_04135 hydroxyacylglutathione hydrolase 0.36 IAI46_16000 flagellar type III secretion system protein FlhB low > 86
Erwinia tracheiphila SCR3 0.33 LU632_RS01080 gloB hydroxyacylglutathione hydrolase 0.31 LU632_RS13510 flhB flagellar type III secretion system protein FlhB low > 74
Dickeya dianthicola ME23 0.33 DZA65_RS17265 hydroxyacylglutathione hydrolase 0.40 DZA65_RS14040 flagellar type III secretion system protein FlhB low > 75
Dickeya dianthicola 67-19 0.33 HGI48_RS16180 hydroxyacylglutathione hydrolase 0.40 HGI48_RS13555 flagellar type III secretion system protein FlhB low > 71
Escherichia coli HS(pFamp)R (ATCC 700891) 0.33 OHPLBJKB_03449 Hydroxyacylglutathione hydrolase GloB 0.34 OHPLBJKB_01848 Flagellar biosynthetic protein FlhB low > 73
Escherichia coli ECRC100 0.33 OKFHMN_09980 gloB hydroxyacylglutathione hydrolase 0.34 OKFHMN_26165 flhB flagellar biosynthesis protein FlhB low > 80
Escherichia coli ECRC101 0.33 MCAODC_00495 gloB hydroxyacylglutathione hydrolase 0.34 MCAODC_19240 flhB flagellar biosynthesis protein FlhB low > 87
Escherichia coli BW25113 0.33 b0212 gloB predicted hydroxyacylglutathione hydrolase (NCBI) 0.34 b1880 flhB flagellar biosynthesis protein B (NCBI) low > 76
Escherichia coli ECRC98 0.33 JDDGAC_13575 gloB hydroxyacylglutathione hydrolase 0.34 JDDGAC_00740 flhB flagellar biosynthesis protein FlhB low > 86
Escherichia coli ECRC102 0.33 NIAGMN_07830 gloB hydroxyacylglutathione hydrolase 0.34 NIAGMN_01895 flhB flagellar biosynthesis protein FlhB — —
Escherichia coli ECRC99 0.33 KEDOAH_18175 gloB hydroxyacylglutathione hydrolase 0.34 KEDOAH_01940 flhB flagellar biosynthesis protein FlhB — —
Escherichia coli ECOR38 0.33 HEPCGN_07920 gloB hydroxyacylglutathione hydrolase 0.34 HEPCGN_04585 flhB flagellar biosynthesis protein FlhB low > 87
Escherichia coli ECOR27 0.33 NOLOHH_02325 gloB hydroxyacylglutathione hydrolase 0.34 NOLOHH_16605 flhB flagellar biosynthesis protein FlhB low > 75
Escherichia coli ECRC62 0.33 BNILDI_09345 gloB hydroxyacylglutathione hydrolase 0.34 BNILDI_15395 flhB flagellar biosynthesis protein FlhB low > 75
Escherichia coli BL21 0.33 ECD_00205 hydroxyacylglutathione hydrolase 0.34 ECD_01851 flagellin export apparatus, substrate specificity protein low > 61
Methylophilus sp. DMC18 0.33 GFF1317 Hydroxyacylglutathione hydrolase 0.38 GFF1342 Flagellar biosynthetic protein FlhB low > 43
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.32 GFF4044 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) 0.38 GFF1661 Flagellar biosynthesis protein FlhB low > 78
Sphingomonas koreensis DSMZ 15582 0.31 Ga0059261_2759 hydroxyacylglutathione hydrolase 0.29 Ga0059261_1103 flagellar biosynthetic protein FlhB low > 68
Magnetospirillum magneticum AMB-1 0.31 AMB_RS21210 hydroxyacylglutathione hydrolase 0.29 AMB_RS03190 flagellar biosynthesis protein FlhB low > 64
Rhodospirillum rubrum S1H 0.31 Rru_A3270 Hydroxyacylglutathione hydrolase (NCBI) 0.26 Rru_A2821 Flagellar biosynthetic protein FlhB (NCBI) low > 58
Rahnella sp. WP5 0.30 EX31_RS21200 hydroxyacylglutathione hydrolase 0.31 EX31_RS11345 flagellar type III secretion system protein FlhB low > 89
Xanthobacter sp. DMC5 0.30 GFF2327 Hydroxyacylglutathione hydrolase GloB 0.25 GFF4495 Flagellar biosynthetic protein FlhB — —
Dinoroseobacter shibae DFL-12 0.29 Dshi_2691 Hydroxyacylglutathione hydrolase (RefSeq) 0.20 Dshi_3256 type III secretion exporter (RefSeq) low > 64
Rhodopseudomonas palustris CGA009 0.29 TX73_003155 hydroxyacylglutathione hydrolase 0.29 TX73_020135 flagellar biosynthesis protein FlhB low > 86
Sinorhizobium meliloti 1021 0.28 SMc00708 hydroxyacylglutathione hydrolase (glyoxalase II) (GLX II) protein 0.22 SMc03018 flagellar biosynthesis protein FlhB low > 103
Agrobacterium fabrum C58 0.28 Atu3614 glyoxalase II 0.22 Atu0564 flagellar biosynthetic protein low > 89
Rhizobium sp. OAE497 0.28 ABIE40_RS17605 hydroxyacylglutathione hydrolase 0.24 ABIE40_RS02930 flagellar biosynthesis protein FlhB low > 107
Phaeobacter inhibens DSM 17395 0.27 PGA1_c25140 hydroxyacylglutathione hydrolase GloB 0.24 PGA1_c35730 flagellar biosynthetic protein FlhB low > 62
Caulobacter crescentus NA1000 0.24 CCNA_00553 hydroxyacylglutathione hydrolase 0.21 CCNA_01131 flagellar biosynthesis protein FlhB low > 66
Caulobacter crescentus NA1000 Δfur 0.24 CCNA_00553 hydroxyacylglutathione hydrolase 0.21 CCNA_01131 flagellar biosynthesis protein FlhB low > 67
Brevundimonas sp. GW460-12-10-14-LB2 0.23 A4249_RS00300 hydroxyacylglutathione hydrolase 0.25 A4249_RS15235 flagellar biosynthesis protein FlhB low > 48
Bosea sp. OAE506 0.18 ABIE41_RS06025 hydroxyacylglutathione hydrolase 0.28 ABIE41_RS13350 flagellar biosynthesis protein FlhB low > 77

Not shown: 6 genomes with orthologs for SO2563 only; 2 genomes with orthologs for SO3215 only