Conservation of cofitness between b0726 and b3771 in Escherichia coli BW25113

87 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0726 sucA alpha-ketoglutarate decarboxylase (NCBI) 1.0 b3771 ilvD dihydroxy-acid dehydratase (NCBI) 0.69 7
Escherichia coli ECRC98 1.00 JDDGAC_10580 sucA 2-oxoglutarate dehydrogenase E1 component 1.00 JDDGAC_18260 ilvD dihydroxy-acid dehydratase
Escherichia fergusonii Becca 1.00 EFB2_03380 2-oxoglutarate dehydrogenase E1 component 0.99 EFB2_04865 Dihydroxy-acid dehydratase
Escherichia coli ECRC101 1.00 OKFHMN_06925 sucA 2-oxoglutarate dehydrogenase E1 component 1.00 OKFHMN_14640 ilvD dihydroxy-acid dehydratase
Escherichia coli ECRC62 1.00 BNILDI_21310 sucA 2-oxoglutarate dehydrogenase E1 component 1.00 BNILDI_04750 ilvD dihydroxy-acid dehydratase
Escherichia coli ECRC101 1.00 MCAODC_26145 sucA 2-oxoglutarate dehydrogenase E1 component 1.00 MCAODC_05145 ilvD dihydroxy-acid dehydratase
Escherichia coli ECOR27 1.00 NOLOHH_23315 sucA 2-oxoglutarate dehydrogenase E1 component 1.00 NOLOHH_06775 ilvD dihydroxy-acid dehydratase
Escherichia coli ECOR38 1.00 HEPCGN_01305 sucA 2-oxoglutarate dehydrogenase E1 component 1.00 HEPCGN_13350 ilvD dihydroxy-acid dehydratase low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02991 2-oxoglutarate dehydrogenase E1 component 1.00 OHPLBJKB_04282 Dihydroxy-acid dehydratase low > 73
Escherichia coli BL21 1.00 ECD_00685 2-oxoglutarate decarboxylase, thiamine triphosphate-binding 1.00 ECD_03649 dihydroxyacid dehydratase
Escherichia coli ECRC99 1.00 KEDOAH_21040 sucA 2-oxoglutarate dehydrogenase E1 component 1.00 KEDOAH_13510 ilvD dihydroxy-acid dehydratase
Escherichia coli ECRC102 1.00 NIAGMN_04975 sucA 2-oxoglutarate dehydrogenase E1 component 1.00 NIAGMN_12395 ilvD dihydroxy-acid dehydratase
Escherichia coli Nissle 1917 1.00 ECOLIN_RS03870 2-oxoglutarate dehydrogenase E1 component 0.99 ECOLIN_RS21665 dihydroxy-acid dehydratase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.96 GFF4639 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) 0.97 GFF2901 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 78
Enterobacter asburiae PDN3 0.95 EX28DRAFT_2266 2-oxoglutarate dehydrogenase, E1 component 0.96 EX28DRAFT_4443 dihydroxy-acid dehydratase
Enterobacter sp. TBS_079 0.94 MPMX20_01354 2-oxoglutarate dehydrogenase E1 component 0.97 MPMX20_04499 Dihydroxy-acid dehydratase 0.55 10
Klebsiella michiganensis M5al 0.94 BWI76_RS08415 2-oxoglutarate dehydrogenase subunit E1 0.96 BWI76_RS00975 dihydroxy-acid dehydratase
Pantoea sp. MT58 0.90 IAI47_13745 2-oxoglutarate dehydrogenase E1 component 0.89 IAI47_01035 dihydroxy-acid dehydratase 0.66 43
Serratia liquefaciens MT49 0.90 IAI46_06275 2-oxoglutarate dehydrogenase E1 component 0.90 IAI46_24345 dihydroxy-acid dehydratase low > 86
Rahnella sp. WP5 0.89 EX31_RS23440 2-oxoglutarate dehydrogenase E1 component 0.87 EX31_RS15005 dihydroxy-acid dehydratase 0.76 24
Dickeya dadantii 3937 0.89 DDA3937_RS06460 2-oxoglutarate dehydrogenase E1 component 0.92 DDA3937_RS20155 dihydroxy-acid dehydratase
Dickeya dianthicola ME23 0.89 DZA65_RS06845 2-oxoglutarate dehydrogenase E1 component 0.91 DZA65_RS21335 dihydroxy-acid dehydratase
Dickeya dianthicola 67-19 0.88 HGI48_RS06500 2-oxoglutarate dehydrogenase E1 component 0.91 HGI48_RS20295 dihydroxy-acid dehydratase
Erwinia tracheiphila SCR3 0.88 LU632_RS16095 sucA 2-oxoglutarate dehydrogenase E1 component 0.86 LU632_RS24400 ilvD dihydroxy-acid dehydratase low > 74
Pectobacterium carotovorum WPP14 0.86 HER17_RS14930 2-oxoglutarate dehydrogenase E1 component 0.91 HER17_RS01075 dihydroxy-acid dehydratase
Vibrio cholerae E7946 ATCC 55056 0.73 CSW01_10430 2-oxoglutarate dehydrogenase subunit E1 0.85 CSW01_00140 dihydroxy-acid dehydratase
Shewanella loihica PV-4 0.71 Shew_1655 kgd alpha-ketoglutarate decarboxylase (RefSeq) 0.78 Shew_0292 dihydroxy-acid dehydratase (RefSeq)
Shewanella oneidensis MR-1 0.70 SO1930 sucA 2-oxoglutarate dehydrogenase, E1 component (NCBI ptt file) 0.80 SO4345 ilvD dihydroxy-acid dehydratase (NCBI ptt file)
Alteromonas macleodii MIT1002 0.70 MIT1002_01948 2-oxoglutarate dehydrogenase E1 component 0.79 MIT1002_04041 Dihydroxy-acid dehydratase
Shewanella sp. ANA-3 0.70 Shewana3_1710 sucA 2-oxoglutarate dehydrogenase E1 component (RefSeq) 0.80 Shewana3_0358 dihydroxy-acid dehydratase (RefSeq)
Shewanella amazonensis SB2B 0.69 Sama_1427 sucA 2-oxoglutarate dehydrogenase E1 component (RefSeq) 0.79 Sama_3279 dihydroxy-acid dehydratase (RefSeq)
Pseudomonas sp. RS175 0.60 PFR28_03096 2-oxoglutarate dehydrogenase E1 component 0.75 PFR28_04278 Dihydroxy-acid dehydratase
Pseudomonas fluorescens GW456-L13 0.60 PfGW456L13_4269 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) 0.75 PfGW456L13_973 Dihydroxy-acid dehydratase (EC 4.2.1.9)
Pseudomonas fluorescens FW300-N1B4 0.60 Pf1N1B4_3681 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) 0.75 Pf1N1B4_2303 Dihydroxy-acid dehydratase (EC 4.2.1.9)
Pseudomonas fluorescens FW300-N2E2 0.60 Pf6N2E2_5855 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) 0.75 Pf6N2E2_4564 Dihydroxy-acid dehydratase (EC 4.2.1.9)
Pseudomonas fluorescens FW300-N2C3 0.60 AO356_19695 2-oxoglutarate dehydrogenase subunit E1 0.75 AO356_13250 dihydroxy-acid dehydratase
Pseudomonas sp. S08-1 0.60 OH686_01970 oxoglutarate dehydrogenase (succinyl-transferring), E1 component 0.75 OH686_14100 dihydroxy-acid dehydratase
Pseudomonas fluorescens FW300-N2E3 0.59 AO353_01835 2-oxoglutarate dehydrogenase subunit E1 0.75 AO353_08345 dihydroxy-acid dehydratase
Pseudomonas stutzeri RCH2 0.59 Psest_2494 2-oxoglutarate dehydrogenase, E1 component 0.75 Psest_0234 dihydroxy-acid dehydratase
Marinobacter adhaerens HP15 0.59 HP15_1521 alpha-ketoglutarate decarboxylase 0.70 HP15_595 dihydroxy-acid dehydratase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.59 Psyr_2009 2-oxoglutarate dehydrogenase E1 component 0.74 Psyr_0469 dihydroxyacid dehydratase
Pseudomonas syringae pv. syringae B728a 0.59 Psyr_2009 2-oxoglutarate dehydrogenase E1 component 0.74 Psyr_0469 dihydroxyacid dehydratase
Pseudomonas simiae WCS417 0.58 PS417_08895 2-oxoglutarate dehydrogenase 0.75 PS417_26890 dihydroxy-acid dehydratase
Pseudomonas fluorescens SBW25 0.58 PFLU_RS08955 2-oxoglutarate dehydrogenase E1 component 0.75 PFLU_RS28535 dihydroxy-acid dehydratase
Pseudomonas fluorescens SBW25-INTG 0.58 PFLU_RS08955 2-oxoglutarate dehydrogenase E1 component 0.75 PFLU_RS28535 dihydroxy-acid dehydratase
Pseudomonas putida KT2440 0.58 PP_4189 2-oxoglutarate decarboxylase, thiamine-requiring E1 subunit 0.74 PP_5128 Dihydroxy-acid dehydratase
Acinetobacter radioresistens SK82 0.56 MPMX26_00751 2-oxoglutarate dehydrogenase E1 component 0.29 MPMX26_03019 Dihydroxy-acid dehydratase
Burkholderia phytofirmans PsJN 0.54 BPHYT_RS08110 2-oxoglutarate dehydrogenase E1 0.74 BPHYT_RS10100 dihydroxy-acid dehydratase
Paraburkholderia bryophila 376MFSha3.1 0.54 H281DRAFT_05113 2-oxoglutarate dehydrogenase E1 component 0.74 H281DRAFT_05312 dihydroxyacid dehydratase
Paraburkholderia graminis OAS925 0.54 ABIE53_002453 2-oxoglutarate dehydrogenase E1 component 0.74 ABIE53_006513 dihydroxy-acid dehydratase
Herbaspirillum seropedicae SmR1 0.54 HSERO_RS14885 2-oxoglutarate dehydrogenase E1 0.74 HSERO_RS02650 dihydroxy-acid dehydratase
Paraburkholderia sabiae LMG 24235 0.53 QEN71_RS23060 2-oxoglutarate dehydrogenase E1 component 0.74 QEN71_RS21095 dihydroxy-acid dehydratase
Lysobacter sp. OAE881 0.53 ABIE51_RS08990 2-oxoglutarate dehydrogenase E1 component 0.27 ABIE51_RS17540 dihydroxy-acid dehydratase
Rhodanobacter denitrificans MT42 0.53 LRK55_RS00725 2-oxoglutarate dehydrogenase E1 component 0.26 LRK55_RS09960 dihydroxy-acid dehydratase
Ralstonia solanacearum GMI1000 0.53 RS_RS06360 2-oxoglutarate dehydrogenase E1 component 0.28 RS_RS12105 dihydroxy-acid dehydratase
Ralstonia solanacearum PSI07 0.53 RPSI07_RS17775 2-oxoglutarate dehydrogenase E1 component 0.29 RPSI07_RS12840 dihydroxy-acid dehydratase
Rhodanobacter denitrificans FW104-10B01 0.53 LRK54_RS00950 2-oxoglutarate dehydrogenase E1 component 0.26 LRK54_RS10320 dihydroxy-acid dehydratase
Cupriavidus basilensis FW507-4G11 0.53 RR42_RS12940 2-oxoglutarate dehydrogenase 0.29 RR42_RS16210 dihydroxy-acid dehydratase
Dechlorosoma suillum PS 0.53 Dsui_2217 2-oxoglutarate dehydrogenase, E1 component 0.74 Dsui_1122 dihydroxy-acid dehydratase
Xanthomonas campestris pv. campestris strain 8004 0.53 Xcc-8004.3412.1 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) 0.72 Xcc-8004.451.1 Dihydroxy-acid dehydratase (EC 4.2.1.9)
Rhodanobacter sp. FW510-T8 0.53 OKGIIK_05940 sucA 2-oxoglutarate dehydrogenase E1 component 0.27 OKGIIK_13600 ilvD dihydroxy-acid dehydratase
Ralstonia solanacearum IBSBF1503 0.52 RALBFv3_RS15580 2-oxoglutarate dehydrogenase E1 component 0.29 RALBFv3_RS04535 dihydroxy-acid dehydratase
Ralstonia solanacearum UW163 0.52 UW163_RS13040 2-oxoglutarate dehydrogenase E1 component 0.29 UW163_RS09135 dihydroxy-acid dehydratase
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS05920 2-oxoglutarate dehydrogenase E1 component 0.28 ABZR86_RS15945 dihydroxy-acid dehydratase
Ralstonia sp. UNC404CL21Col 0.52 ABZR87_RS11110 2-oxoglutarate dehydrogenase E1 component 0.75 ABZR87_RS00240 dihydroxy-acid dehydratase
Castellaniella sp019104865 MT123 0.52 ABCV34_RS01720 2-oxoglutarate dehydrogenase E1 component 0.72 ABCV34_RS14810 dihydroxy-acid dehydratase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.52 GFF4878 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) 0.64 GFF2073 Dihydroxy-acid dehydratase (EC 4.2.1.9)
Variovorax sp. SCN45 0.52 GFF979 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) 0.31 GFF471 Dihydroxy-acid dehydratase (EC 4.2.1.9)
Variovorax sp. OAS795 0.51 ABID97_RS14145 2-oxoglutarate dehydrogenase E1 component 0.31 ABID97_RS17500 dihydroxy-acid dehydratase
Acidovorax sp. GW101-3H11 0.51 Ac3H11_2467 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) 0.74 Ac3H11_955 Dihydroxy-acid dehydratase (EC 4.2.1.9)
Azospirillum brasilense Sp245 0.43 AZOBR_RS14075 MFS transporter 0.74 AZOBR_RS15015 dihydroxy-acid dehydratase
Caulobacter crescentus NA1000 Δfur 0.42 CCNA_00342 2-oxoglutarate dehydrogenase E1 component 0.72 CCNA_03139 dihydroxy-acid dehydratase
Caulobacter crescentus NA1000 0.42 CCNA_00342 2-oxoglutarate dehydrogenase E1 component 0.72 CCNA_03139 dihydroxy-acid dehydratase
Azospirillum sp. SherDot2 0.42 MPMX19_00104 2-oxoglutarate dehydrogenase E1 component 0.74 MPMX19_05356 Dihydroxy-acid dehydratase
Agrobacterium fabrum C58 0.42 Atu2636 oxoglutarate dehydrogenase E1 component 0.73 Atu1918 dihydroxy-acid dehydratase
Bosea sp. OAE506 0.41 ABIE41_RS08975 2-oxoglutarate dehydrogenase E1 component 0.29 ABIE41_RS15690 dihydroxy-acid dehydratase
Dinoroseobacter shibae DFL-12 0.41 Dshi_2883 2-oxoglutarate dehydrogenase, E1 subunit (RefSeq) 0.31 Dshi_0129 dihydroxy-acid dehydratase (RefSeq)
Rhodopseudomonas palustris CGA009 0.41 TX73_000980 2-oxoglutarate dehydrogenase E1 component 0.74 TX73_007515 dihydroxy-acid dehydratase
Sinorhizobium meliloti 1021 0.41 SMc02482 2-oxoglutarate dehydrogenase E1 component 0.75 SMc04045 dihydroxy-acid dehydratase
Brevundimonas sp. GW460-12-10-14-LB2 0.41 A4249_RS14430 2-oxoglutarate dehydrogenase E1 component 0.25 A4249_RS10030 dihydroxy-acid dehydratase
Echinicola vietnamensis KMM 6221, DSM 17526 0.41 Echvi_0773 2-oxoglutarate dehydrogenase, E1 component 0.29 Echvi_2055 dihydroxy-acid dehydratase
Rhodospirillum rubrum S1H 0.41 Rru_A1213 kgd alpha-ketoglutarate decarboxylase (RefSeq) 0.71 Rru_A1786 Dihydroxy-acid dehydratase (NCBI)
Phaeobacter inhibens DSM 17395 0.40 PGA1_c03600 2-oxoglutarate dehydrogenase E1 component SucA 0.70 PGA1_c29490 dihydroxy-acid dehydratase LivD
Pedobacter sp. GW460-11-11-14-LB5 0.40 CA265_RS17530 2-oxoglutarate dehydrogenase E1 component 0.27 CA265_RS15795 dihydroxy-acid dehydratase
Magnetospirillum magneticum AMB-1 0.40 AMB_RS20040 2-oxoglutarate dehydrogenase E1 component 0.73 AMB_RS12770 dihydroxy-acid dehydratase
Mucilaginibacter yixingensis YX-36 DSM 26809 0.40 ABZR88_RS01535 2-oxoglutarate dehydrogenase E1 component 0.27 ABZR88_RS11575 dihydroxy-acid dehydratase
Pontibacter actiniarum KMM 6156, DSM 19842 0.40 CA264_18485 2-oxoglutarate dehydrogenase subunit E1 0.28 CA264_06935 dihydroxy-acid dehydratase
Sphingomonas koreensis DSMZ 15582 0.40 Ga0059261_1341 2-oxoglutarate dehydrogenase, E1 component 0.28 Ga0059261_4216 Dihydroxyacid dehydratase/phosphogluconate dehydratase

Not shown: 1 genomes with orthologs for b0726 only; 14 genomes with orthologs for b3771 only