Conservation of cofitness between b3389 and b3770 in Escherichia coli BW25113

89 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3389 aroB 3-dehydroquinate synthase (NCBI) 1.0 b3770 ilvE branched-chain amino acid aminotransferase (NCBI) 0.94 7
Escherichia coli ECOR27 1.00 NOLOHH_08905 aroB 3-dehydroquinate synthase 1.00 NOLOHH_06780 ilvE branched-chain-amino-acid transaminase low > 57
Escherichia coli BL21 1.00 ECD_03241 3-dehydroquinate synthase 1.00 ECD_03648 branched-chain amino acid aminotransferase low > 60
Escherichia coli ECRC62 1.00 BNILDI_02615 aroB 3-dehydroquinate synthase 1.00 BNILDI_04745 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli ECOR38 1.00 HEPCGN_15935 aroB 3-dehydroquinate synthase 1.00 HEPCGN_13355 ilvE branched-chain-amino-acid transaminase low > 85
Escherichia fergusonii Becca 1.00 EFB2_00439 3-dehydroquinate synthase 1.00 EFB2_04866 Branched-chain-amino-acid aminotransferase low > 86
Escherichia coli ECRC99 0.99 KEDOAH_11025 aroB 3-dehydroquinate synthase 1.00 KEDOAH_13505 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli ECRC101 0.99 OKFHMN_17115 aroB 3-dehydroquinate synthase 1.00 OKFHMN_14645 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli ECRC101 0.99 MCAODC_07645 aroB 3-dehydroquinate synthase 1.00 MCAODC_05150 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli ECRC98 0.99 JDDGAC_20745 aroB 3-dehydroquinate synthase 1.00 JDDGAC_18265 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli ECRC102 0.99 NIAGMN_14885 aroB 3-dehydroquinate synthase 1.00 NIAGMN_12400 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_00314 3-dehydroquinate synthase 1.00 OHPLBJKB_04283 Branched-chain-amino-acid aminotransferase low > 73
Escherichia coli Nissle 1917 0.99 ECOLIN_RS19360 3-dehydroquinate synthase 1.00 ECOLIN_RS21660 branched-chain-amino-acid transaminase low > 52
Enterobacter sp. TBS_079 0.89 MPMX20_04278 3-dehydroquinate synthase 0.99 MPMX20_04500 Branched-chain-amino-acid aminotransferase low > 85
Enterobacter asburiae PDN3 0.88 EX28DRAFT_4153 3-dehydroquinate synthase (EC 4.2.3.4) 0.98 EX28DRAFT_4442 branched-chain amino acid aminotransferase, group I 0.58 36
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF630 3-dehydroquinate synthase (EC 4.2.3.4) 0.98 GFF2902 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 78
Klebsiella michiganensis M5al 0.85 BWI76_RS26085 3-dehydroquinate synthase 0.97 BWI76_RS00970 branched chain amino acid aminotransferase low > 92
Pantoea sp. MT58 0.84 IAI47_01895 3-dehydroquinate synthase 0.91 IAI47_01030 branched-chain amino acid transaminase — —
Rahnella sp. WP5 0.84 EX31_RS04720 3-dehydroquinate synthase 0.90 EX31_RS15000 branched-chain amino acid transaminase — —
Erwinia tracheiphila SCR3 0.82 LU632_RS22865 aroB 3-dehydroquinate synthase 0.90 LU632_RS24405 branched-chain amino acid transaminase low > 74
Serratia liquefaciens MT49 0.81 IAI46_23700 3-dehydroquinate synthase 0.92 IAI46_24350 branched-chain-amino-acid transaminase low > 86
Dickeya dadantii 3937 0.81 DDA3937_RS19545 3-dehydroquinate synthase 0.91 DDA3937_RS20160 branched-chain-amino-acid transaminase — —
Dickeya dianthicola 67-19 0.80 HGI48_RS19675 3-dehydroquinate synthase 0.90 HGI48_RS20300 branched-chain-amino-acid transaminase — —
Dickeya dianthicola ME23 0.80 DZA65_RS20760 3-dehydroquinate synthase 0.91 DZA65_RS21340 branched-chain amino acid transaminase — —
Pectobacterium carotovorum WPP14 0.79 HER17_RS01780 3-dehydroquinate synthase 0.90 HER17_RS01070 branched-chain amino acid transaminase low > 75
Vibrio cholerae E7946 ATCC 55056 0.63 CSW01_13300 3-dehydroquinate synthase 0.75 CSW01_00145 branched-chain-amino-acid transaminase low > 62
Shewanella amazonensis SB2B 0.62 Sama_3367 3-dehydroquinate synthase (RefSeq) 0.19 Sama_3299 branched-chain amino acid aminotransferase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.61 SO0287 aroB 3-dehydroquinate synthase (NCBI ptt file) 0.19 SO0340 ilvE branched-chain amino acid aminotransferase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.61 Shewana3_3893 aroB 3-dehydroquinate synthase (RefSeq) 0.19 Shewana3_3830 branched-chain amino acid aminotransferase (RefSeq) low > 73
Shewanella loihica PV-4 0.60 Shew_0214 3-dehydroquinate synthase (RefSeq) 0.68 Shew_0291 branched-chain amino acid aminotransferase (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.60 MIT1002_00447 3-dehydroquinate synthase 0.17 MIT1002_00377 Branched-chain-amino-acid aminotransferase 2 — —
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_1537 3-dehydroquinate synthase (EC 4.2.3.4) 0.22 Pf1N1B4_4476 Branched-chain amino acid aminotransferase (EC 2.6.1.42) — —
Pseudomonas putida KT2440 0.55 PP_5078 3-dehydroquinate synthase 0.19 PP_3511 Branched-chain-amino-acid aminotransferase — —
Pseudomonas simiae WCS417 0.55 PS417_01985 3-dehydroquinate synthase 0.21 PS417_17565 branched-chain amino acid aminotransferase — —
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS02030 3-dehydroquinate synthase 0.21 PFLU_RS19375 branched-chain amino acid aminotransferase — —
Pseudomonas fluorescens SBW25 0.55 PFLU_RS02030 3-dehydroquinate synthase 0.21 PFLU_RS19375 branched-chain amino acid aminotransferase — —
Pseudomonas fluorescens GW456-L13 0.55 PfGW456L13_275 3-dehydroquinate synthase (EC 4.2.3.4) 0.27 PfGW456L13_4923 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 87
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_3754 3-dehydroquinate synthase (EC 4.2.3.4) 0.21 Pf6N2E2_477 Branched-chain amino acid aminotransferase (EC 2.6.1.42) — —
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_09385 3-dehydroquinate synthase 0.21 AO356_22970 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) — —
Pseudomonas fluorescens FW300-N2E3 0.54 AO353_12505 3-dehydroquinate synthase 0.20 AO353_26655 branched-chain amino acid aminotransferase — —
Pseudomonas sp. RS175 0.54 PFR28_05013 3-dehydroquinate synthase 0.21 PFR28_02449 putative branched-chain-amino-acid aminotransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.54 Psyr_0409 3-dehydroquinate synthase 0.22 Psyr_1148 branched chain amino acid aminotransferase apoenzyme — —
Pseudomonas syringae pv. syringae B728a 0.54 Psyr_0409 3-dehydroquinate synthase 0.22 Psyr_1148 branched chain amino acid aminotransferase apoenzyme — —
Pseudomonas sp. S08-1 0.54 OH686_10015 3-dehydroquinate synthase 0.46 OH686_09695 branched-chain amino acid aminotransferase — —
Dechlorosoma suillum PS 0.53 Dsui_1095 3-dehydroquinate synthase 0.47 Dsui_2030 branched-chain amino acid aminotransferase, group I — —
Pseudomonas stutzeri RCH2 0.53 Psest_3713 3-dehydroquinate synthase 0.46 Psest_0450 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) — —
Variovorax sp. OAS795 0.53 ABID97_RS23255 3-dehydroquinate synthase 0.44 ABID97_RS03790 branched-chain amino acid transaminase — —
Marinobacter adhaerens HP15 0.53 HP15_480 3-dehydroquinate synthase 0.43 HP15_436 branched-chain-amino-acid aminotransferase — —
Burkholderia phytofirmans PsJN 0.52 BPHYT_RS17885 3-dehydroquinate synthase 0.43 BPHYT_RS16285 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) low > 109
Paraburkholderia graminis OAS925 0.52 ABIE53_003740 3-dehydroquinate synthase 0.43 ABIE53_003432 branched-chain amino acid aminotransferase — —
Cupriavidus basilensis FW507-4G11 0.52 RR42_RS19005 3-dehydroquinate synthase 0.20 RR42_RS25890 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) low > 128
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS28035 3-dehydroquinate synthase 0.44 QEN71_RS02410 branched-chain amino acid transaminase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.51 H281DRAFT_05615 3-dehydroquinate synthase 0.43 H281DRAFT_04193 branched chain amino acid aminotransferase apoenzyme — —
Ralstonia solanacearum GMI1000 0.51 RS_RS14880 3-dehydroquinate synthase 0.45 RS_RS02840 branched-chain amino acid transaminase — —
Ralstonia solanacearum PSI07 0.50 RPSI07_RS10300 3-dehydroquinate synthase 0.45 RPSI07_RS21175 branched-chain amino acid transaminase — —
Ralstonia solanacearum UW163 0.50 UW163_RS06680 3-dehydroquinate synthase 0.46 UW163_RS01455 branched-chain amino acid transaminase — —
Ralstonia solanacearum IBSBF1503 0.50 RALBFv3_RS06935 3-dehydroquinate synthase 0.46 RALBFv3_RS12155 branched-chain amino acid transaminase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.50 GFF1331 3-dehydroquinate synthase (EC 4.2.3.4) 0.46 GFF1835 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 90
Ralstonia sp. UNC404CL21Col 0.50 ABZR87_RS02590 3-dehydroquinate synthase 0.25 ABZR87_RS18540 branched-chain amino acid aminotransferase low > 80
Acinetobacter radioresistens SK82 0.50 MPMX26_02810 3-dehydroquinate synthase 0.40 MPMX26_00445 Branched-chain-amino-acid aminotransferase — —
Acidovorax sp. GW101-3H11 0.50 Ac3H11_4705 3-dehydroquinate synthase (EC 4.2.3.4) 0.46 Ac3H11_3369 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 79
Variovorax sp. SCN45 0.49 GFF5325 3-dehydroquinate synthase (EC 4.2.3.4) 0.44 GFF5079 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 127
Castellaniella sp019104865 MT123 0.46 ABCV34_RS12705 3-dehydroquinate synthase 0.45 ABCV34_RS07930 branched-chain amino acid transaminase — —
Kangiella aquimarina DSM 16071 0.44 B158DRAFT_0764 3-dehydroquinate synthase (EC 4.2.3.4) 0.20 B158DRAFT_0078 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase low > 40
Rhodanobacter sp. FW510-T8 0.42 OKGIIK_11185 aroB 3-dehydroquinate synthase 0.56 OKGIIK_11840 ilvE branched-chain amino acid transaminase — —
Dyella japonica UNC79MFTsu3.2 0.42 ABZR86_RS10480 3-dehydroquinate synthase 0.56 ABZR86_RS15965 branched-chain amino acid transaminase 0.80 41
Caulobacter crescentus NA1000 0.41 CCNA_03104 3-dehydroquinate synthase 0.31 CCNA_03024 branched-chain amino acid aminotransferase low > 66
Rhodospirillum rubrum S1H 0.41 Rru_A3741 3-dehydroquinate synthase (NCBI) 0.32 Rru_A2223 Branched-chain amino acid aminotransferase I (NCBI) — —
Caulobacter crescentus NA1000 Δfur 0.41 CCNA_03104 3-dehydroquinate synthase 0.31 CCNA_03024 branched-chain amino acid aminotransferase low > 67
Lysobacter sp. OAE881 0.41 ABIE51_RS16100 3-dehydroquinate synthase 0.55 ABIE51_RS16505 branched-chain amino acid transaminase — —
Xanthomonas campestris pv. campestris strain 8004 0.41 Xcc-8004.1615.1 3-dehydroquinate synthase (EC 4.2.3.4) 0.19 Xcc-8004.4199.1 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 74
Rhodanobacter denitrificans FW104-10B01 0.41 LRK54_RS04310 3-dehydroquinate synthase 0.56 LRK54_RS12020 branched-chain amino acid transaminase — —
Rhodanobacter denitrificans MT42 0.41 LRK55_RS04085 3-dehydroquinate synthase 0.56 LRK55_RS11755 branched-chain amino acid transaminase — —
Synechococcus elongatus PCC 7942 0.40 Synpcc7942_0525 aroB 3-dehydroquinate synthase 0.29 Synpcc7942_1029 ilvE branched-chain amino acid aminotransferase — —
Magnetospirillum magneticum AMB-1 0.40 AMB_RS19865 3-dehydroquinate synthase 0.31 AMB_RS02850 branched-chain amino acid aminotransferase — —
Rhizobium sp. OAE497 0.38 ABIE40_RS17670 3-dehydroquinate synthase 0.19 ABIE40_RS22240 branched-chain amino acid aminotransferase — —
Agrobacterium fabrum C58 0.38 Atu3625 3-dehydroquinate synthase 0.18 Atu0871 branched-chain-amino-acid aminotransferase — —
Phaeobacter inhibens DSM 17395 0.38 PGA1_c14100 3-dehydroquinate synthase AroB 0.29 PGA1_c34110 branched-chain-amino-acid aminotransferase IlvE — —
Azospirillum brasilense Sp245 0.38 AZOBR_RS03220 3-dehydroquinate synthase 0.31 AZOBR_RS16425 branched-chain amino acid aminotransferase — —
Sinorhizobium meliloti 1021 0.38 SMc00696 3-dehydroquinate synthase 0.21 SMc02896 branched-chain amino acid aminotransferase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.38 A4249_RS04175 3-dehydroquinate synthase 0.27 A4249_RS09820 branched-chain amino acid aminotransferase — —
Azospirillum sp. SherDot2 0.37 MPMX19_02639 3-dehydroquinate synthase 0.18 MPMX19_02406 Branched-chain-amino-acid aminotransferase — —
Rhodopseudomonas palustris CGA009 0.37 TX73_002610 3-dehydroquinate synthase 0.18 TX73_022650 branched-chain amino acid aminotransferase — —
Sphingomonas koreensis DSMZ 15582 0.36 Ga0059261_3591 3-dehydroquinate synthase (EC 4.2.3.4) 0.23 Ga0059261_3811 branched-chain amino acid aminotransferase, group II — —
Dinoroseobacter shibae DFL-12 0.36 Dshi_1608 3-dehydroquinate synthase (RefSeq) 0.26 Dshi_3301 branched-chain amino acid aminotransferase (RefSeq) — —
Mycobacterium tuberculosis H37Rv 0.29 Rv2538c 3-dehydroquinate synthase AroB 0.19 Rv2210c Branched-chain amino acid transaminase IlvE — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.25 ABZR88_RS05215 3-dehydroquinate synthase 0.16 ABZR88_RS22095 branched-chain amino acid aminotransferase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.22 CA264_13105 3-dehydroquinate synthase 0.32 CA264_06940 branched-chain amino acid aminotransferase — —
Bacteroides stercoris CC31F 0.21 HMPREF1181_RS09265 3-dehydroquinate synthase 0.19 HMPREF1181_RS06865 branched-chain amino acid aminotransferase low > 56
Bacteroides ovatus ATCC 8483 0.21 BACOVA_04629 3-dehydroquinate synthase 0.30 BACOVA_03679 branched-chain-amino-acid transaminase — —

Not shown: 0 genomes with orthologs for b3389 only; 13 genomes with orthologs for b3770 only