Conservation of cofitness between b0726 and b0072 in Escherichia coli BW25113

88 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0726 sucA alpha-ketoglutarate decarboxylase (NCBI) 1.0 b0072 leuC isopropylmalate isomerase large subunit (NCBI) 0.69 8
Escherichia coli ECRC98 1.00 JDDGAC_10580 sucA 2-oxoglutarate dehydrogenase E1 component 1.00 JDDGAC_14320 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECRC101 1.00 OKFHMN_06925 sucA 2-oxoglutarate dehydrogenase E1 component 1.00 OKFHMN_10725 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECRC102 1.00 NIAGMN_04975 sucA 2-oxoglutarate dehydrogenase E1 component 1.00 NIAGMN_08575 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECRC101 1.00 MCAODC_26145 sucA 2-oxoglutarate dehydrogenase E1 component 1.00 MCAODC_01240 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECRC99 1.00 KEDOAH_21040 sucA 2-oxoglutarate dehydrogenase E1 component 1.00 KEDOAH_17430 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli BL21 1.00 ECD_00685 2-oxoglutarate decarboxylase, thiamine triphosphate-binding 1.00 ECD_00074 3-isopropylmalate dehydratase large subunit
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02991 2-oxoglutarate dehydrogenase E1 component 1.00 OHPLBJKB_03585 3-isopropylmalate dehydratase large subunit low > 73
Escherichia fergusonii Becca 1.00 EFB2_03380 2-oxoglutarate dehydrogenase E1 component 1.00 EFB2_03973 3-isopropylmalate dehydratase large subunit
Escherichia coli ECOR27 1.00 NOLOHH_23315 sucA 2-oxoglutarate dehydrogenase E1 component 1.00 NOLOHH_03070 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECRC62 1.00 BNILDI_21310 sucA 2-oxoglutarate dehydrogenase E1 component 1.00 BNILDI_08540 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECOR38 1.00 HEPCGN_01305 sucA 2-oxoglutarate dehydrogenase E1 component 1.00 HEPCGN_08705 leuC1 3-isopropylmalate dehydratase large subunit 1 low > 85
Escherichia coli Nissle 1917 1.00 ECOLIN_RS03870 2-oxoglutarate dehydrogenase E1 component 1.00 ECOLIN_RS00390 3-isopropylmalate dehydratase large subunit
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.96 GFF4639 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) 0.94 GFF166 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) low > 78
Enterobacter asburiae PDN3 0.95 EX28DRAFT_2266 2-oxoglutarate dehydrogenase, E1 component 0.95 EX28DRAFT_3668 3-isopropylmalate dehydratase, large subunit
Enterobacter sp. TBS_079 0.94 MPMX20_01354 2-oxoglutarate dehydrogenase E1 component 0.94 MPMX20_00767 3-isopropylmalate dehydratase large subunit 1 0.54 28
Klebsiella michiganensis M5al 0.94 BWI76_RS08415 2-oxoglutarate dehydrogenase subunit E1 0.95 BWI76_RS04670 3-isopropylmalate dehydratase large subunit
Pantoea sp. MT58 0.90 IAI47_13745 2-oxoglutarate dehydrogenase E1 component 0.87 IAI47_16010 3-isopropylmalate dehydratase large subunit 0.68 31
Serratia liquefaciens MT49 0.90 IAI46_06275 2-oxoglutarate dehydrogenase E1 component 0.86 IAI46_03345 3-isopropylmalate dehydratase large subunit low > 86
Rahnella sp. WP5 0.89 EX31_RS23440 2-oxoglutarate dehydrogenase E1 component 0.87 EX31_RS03690 3-isopropylmalate dehydratase large subunit 0.75 30
Dickeya dadantii 3937 0.89 DDA3937_RS06460 2-oxoglutarate dehydrogenase E1 component 0.85 DDA3937_RS18125 3-isopropylmalate dehydratase large subunit
Dickeya dianthicola ME23 0.89 DZA65_RS06845 2-oxoglutarate dehydrogenase E1 component 0.85 DZA65_RS19210 3-isopropylmalate dehydratase large subunit
Dickeya dianthicola 67-19 0.88 HGI48_RS06500 2-oxoglutarate dehydrogenase E1 component 0.85 HGI48_RS18065 3-isopropylmalate dehydratase large subunit
Erwinia tracheiphila SCR3 0.88 LU632_RS16095 sucA 2-oxoglutarate dehydrogenase E1 component 0.79 LU632_RS02870 leuC 3-isopropylmalate dehydratase large subunit low > 74
Pectobacterium carotovorum WPP14 0.86 HER17_RS14930 2-oxoglutarate dehydrogenase E1 component 0.86 HER17_RS03075 3-isopropylmalate dehydratase large subunit
Vibrio cholerae E7946 ATCC 55056 0.73 CSW01_10430 2-oxoglutarate dehydrogenase subunit E1 0.80 CSW01_12605 3-isopropylmalate dehydratase large subunit
Shewanella loihica PV-4 0.71 Shew_1655 kgd alpha-ketoglutarate decarboxylase (RefSeq) 0.71 Shew_3470 isopropylmalate isomerase large subunit (RefSeq)
Shewanella oneidensis MR-1 0.70 SO1930 sucA 2-oxoglutarate dehydrogenase, E1 component (NCBI ptt file) 0.73 SO4234 leuC 3-isopropylmalate dehydratase, large subunit (NCBI ptt file)
Alteromonas macleodii MIT1002 0.70 MIT1002_01948 2-oxoglutarate dehydrogenase E1 component 0.69 MIT1002_00947 3-isopropylmalate dehydratase large subunit
Shewanella sp. ANA-3 0.70 Shewana3_1710 sucA 2-oxoglutarate dehydrogenase E1 component (RefSeq) 0.73 Shewana3_3759 isopropylmalate isomerase large subunit (RefSeq)
Shewanella amazonensis SB2B 0.69 Sama_1427 sucA 2-oxoglutarate dehydrogenase E1 component (RefSeq) 0.72 Sama_0337 isopropylmalate isomerase large subunit (RefSeq)
Kangiella aquimarina DSM 16071 0.61 B158DRAFT_1424 2-oxoglutarate dehydrogenase, E1 component 0.63 B158DRAFT_1319 3-isopropylmalate dehydratase, large subunit
Pseudomonas sp. RS175 0.60 PFR28_03096 2-oxoglutarate dehydrogenase E1 component 0.62 PFR28_02824 3-isopropylmalate dehydratase large subunit
Pseudomonas fluorescens GW456-L13 0.60 PfGW456L13_4269 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) 0.62 PfGW456L13_3948 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
Pseudomonas fluorescens FW300-N1B4 0.60 Pf1N1B4_3681 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) 0.62 Pf1N1B4_15 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
Pseudomonas fluorescens FW300-N2E2 0.60 Pf6N2E2_5855 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) 0.62 Pf6N2E2_63 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
Pseudomonas sp. S08-1 0.60 OH686_01970 oxoglutarate dehydrogenase (succinyl-transferring), E1 component 0.63 OH686_04480 3-isopropylmalate dehydratase large subunit
Pseudomonas fluorescens FW300-N2C3 0.60 AO356_19695 2-oxoglutarate dehydrogenase subunit E1 0.62 AO356_21400 isopropylmalate isomerase
Pseudomonas fluorescens FW300-N2E3 0.59 AO353_01835 2-oxoglutarate dehydrogenase subunit E1 0.61 AO353_20620 isopropylmalate isomerase
Pseudomonas stutzeri RCH2 0.59 Psest_2494 2-oxoglutarate dehydrogenase, E1 component 0.63 Psest_2591 3-isopropylmalate dehydratase, large subunit
Marinobacter adhaerens HP15 0.59 HP15_1521 alpha-ketoglutarate decarboxylase 0.62 HP15_1834 protein containing 3-isopropylmalate dehydratase, large subunit region domain
Pseudomonas syringae pv. syringae B728a ΔmexB 0.59 Psyr_2009 2-oxoglutarate dehydrogenase E1 component 0.62 Psyr_1983 3-isopropylmalate dehydratase, large subunit
Pseudomonas syringae pv. syringae B728a 0.59 Psyr_2009 2-oxoglutarate dehydrogenase E1 component 0.62 Psyr_1983 3-isopropylmalate dehydratase, large subunit
Pseudomonas simiae WCS417 0.58 PS417_08895 2-oxoglutarate dehydrogenase 0.61 PS417_18600 isopropylmalate isomerase
Pseudomonas fluorescens SBW25 0.58 PFLU_RS08955 2-oxoglutarate dehydrogenase E1 component 0.62 PFLU_RS20580 3-isopropylmalate dehydratase large subunit
Pseudomonas fluorescens SBW25-INTG 0.58 PFLU_RS08955 2-oxoglutarate dehydrogenase E1 component 0.62 PFLU_RS20580 3-isopropylmalate dehydratase large subunit
Pseudomonas putida KT2440 0.58 PP_4189 2-oxoglutarate decarboxylase, thiamine-requiring E1 subunit 0.61 PP_1985 3-isopropylmalate dehydratase large subunit
Acinetobacter radioresistens SK82 0.56 MPMX26_00751 2-oxoglutarate dehydrogenase E1 component 0.62 MPMX26_00345 3-isopropylmalate dehydratase large subunit
Burkholderia phytofirmans PsJN 0.54 BPHYT_RS08110 2-oxoglutarate dehydrogenase E1 0.62 BPHYT_RS33915 isopropylmalate isomerase
Paraburkholderia bryophila 376MFSha3.1 0.54 H281DRAFT_05113 2-oxoglutarate dehydrogenase E1 component 0.62 H281DRAFT_06075 3-isopropylmalate dehydratase, large subunit
Paraburkholderia graminis OAS925 0.54 ABIE53_002453 2-oxoglutarate dehydrogenase E1 component 0.62 ABIE53_004801 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit
Herbaspirillum seropedicae SmR1 0.54 HSERO_RS14885 2-oxoglutarate dehydrogenase E1 0.61 HSERO_RS16515 isopropylmalate isomerase
Paraburkholderia sabiae LMG 24235 0.53 QEN71_RS23060 2-oxoglutarate dehydrogenase E1 component 0.62 QEN71_RS17605 3-isopropylmalate dehydratase large subunit
Lysobacter sp. OAE881 0.53 ABIE51_RS08990 2-oxoglutarate dehydrogenase E1 component 0.53 ABIE51_RS17575 3-isopropylmalate dehydratase large subunit
Ralstonia solanacearum GMI1000 0.53 RS_RS06360 2-oxoglutarate dehydrogenase E1 component 0.62 RS_RS10000 3-isopropylmalate dehydratase large subunit
Rhodanobacter denitrificans MT42 0.53 LRK55_RS00725 2-oxoglutarate dehydrogenase E1 component 0.54 LRK55_RS07105 3-isopropylmalate dehydratase large subunit
Ralstonia solanacearum PSI07 0.53 RPSI07_RS17775 2-oxoglutarate dehydrogenase E1 component 0.62 RPSI07_RS14695 3-isopropylmalate dehydratase large subunit
Rhodanobacter denitrificans FW104-10B01 0.53 LRK54_RS00950 2-oxoglutarate dehydrogenase E1 component 0.54 LRK54_RS07375 3-isopropylmalate dehydratase large subunit
Cupriavidus basilensis FW507-4G11 0.53 RR42_RS12940 2-oxoglutarate dehydrogenase 0.63 RR42_RS14400 isopropylmalate isomerase
Dechlorosoma suillum PS 0.53 Dsui_2217 2-oxoglutarate dehydrogenase, E1 component 0.60 Dsui_3201 3-isopropylmalate dehydratase, large subunit
Xanthomonas campestris pv. campestris strain 8004 0.53 Xcc-8004.3412.1 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) 0.63 Xcc-8004.1049.1 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
Rhodanobacter sp. FW510-T8 0.53 OKGIIK_05940 sucA 2-oxoglutarate dehydrogenase E1 component 0.49 OKGIIK_13585 leuC 3-isopropylmalate dehydratase large subunit
Ralstonia solanacearum UW163 0.52 UW163_RS13040 2-oxoglutarate dehydrogenase E1 component 0.62 UW163_RS11105 3-isopropylmalate dehydratase large subunit
Ralstonia solanacearum IBSBF1503 0.52 RALBFv3_RS15580 2-oxoglutarate dehydrogenase E1 component 0.62 RALBFv3_RS02620 3-isopropylmalate dehydratase large subunit
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS05920 2-oxoglutarate dehydrogenase E1 component 0.51 ABZR86_RS15960 3-isopropylmalate dehydratase large subunit
Ralstonia sp. UNC404CL21Col 0.52 ABZR87_RS11110 2-oxoglutarate dehydrogenase E1 component 0.63 ABZR87_RS14540 3-isopropylmalate dehydratase large subunit
Castellaniella sp019104865 MT123 0.52 ABCV34_RS01720 2-oxoglutarate dehydrogenase E1 component 0.62 ABCV34_RS04290 3-isopropylmalate dehydratase large subunit
Hydrogenophaga sp. GW460-11-11-14-LB1 0.52 GFF4878 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) 0.60 GFF3363 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
Variovorax sp. SCN45 0.52 GFF979 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) 0.60 GFF3890 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
Variovorax sp. OAS795 0.51 ABID97_RS14145 2-oxoglutarate dehydrogenase E1 component 0.60 ABID97_RS08465 3-isopropylmalate dehydratase large subunit
Acidovorax sp. GW101-3H11 0.51 Ac3H11_2467 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) 0.59 Ac3H11_1525 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
Azospirillum brasilense Sp245 0.43 AZOBR_RS14075 MFS transporter 0.67 AZOBR_RS03545 isopropylmalate isomerase
Caulobacter crescentus NA1000 Δfur 0.42 CCNA_00342 2-oxoglutarate dehydrogenase E1 component 0.61 CCNA_00196 3-isopropylmalate dehydratase large subunit
Caulobacter crescentus NA1000 0.42 CCNA_00342 2-oxoglutarate dehydrogenase E1 component 0.61 CCNA_00196 3-isopropylmalate dehydratase large subunit
Azospirillum sp. SherDot2 0.42 MPMX19_00104 2-oxoglutarate dehydrogenase E1 component 0.69 MPMX19_01998 3-isopropylmalate dehydratase large subunit
Agrobacterium fabrum C58 0.42 Atu2636 oxoglutarate dehydrogenase E1 component 0.64 Atu2709 3-isopropylmalate dehydratase, large subunit
Bosea sp. OAE506 0.41 ABIE41_RS08975 2-oxoglutarate dehydrogenase E1 component 0.63 ABIE41_RS11660 3-isopropylmalate dehydratase large subunit
Dinoroseobacter shibae DFL-12 0.41 Dshi_2883 2-oxoglutarate dehydrogenase, E1 subunit (RefSeq) 0.61 Dshi_0085 3-isopropylmalate dehydratase, large subunit (RefSeq)
Rhodopseudomonas palustris CGA009 0.41 TX73_000980 2-oxoglutarate dehydrogenase E1 component 0.62 TX73_001245 3-isopropylmalate dehydratase large subunit
Sinorhizobium meliloti 1021 0.41 SMc02482 2-oxoglutarate dehydrogenase E1 component 0.66 SMc03823 isopropylmalate isomerase large subunit
Brevundimonas sp. GW460-12-10-14-LB2 0.41 A4249_RS14430 2-oxoglutarate dehydrogenase E1 component 0.52 A4249_RS10005 3-isopropylmalate dehydratase large subunit
Echinicola vietnamensis KMM 6221, DSM 17526 0.41 Echvi_0773 2-oxoglutarate dehydrogenase, E1 component 0.54 Echvi_2059 3-isopropylmalate dehydratase, large subunit
Rhodospirillum rubrum S1H 0.41 Rru_A1213 kgd alpha-ketoglutarate decarboxylase (RefSeq) 0.67 Rru_A1189 3-isopropylmalate dehydratase large subunit region (NCBI)
Phaeobacter inhibens DSM 17395 0.40 PGA1_c03600 2-oxoglutarate dehydrogenase E1 component SucA 0.62 PGA1_c29780 3-isopropylmalate dehydratase large subunit
Pedobacter sp. GW460-11-11-14-LB5 0.40 CA265_RS17530 2-oxoglutarate dehydrogenase E1 component 0.57 CA265_RS15830 3-isopropylmalate dehydratase large subunit
Magnetospirillum magneticum AMB-1 0.40 AMB_RS20040 2-oxoglutarate dehydrogenase E1 component 0.65 AMB_RS20560 3-isopropylmalate dehydratase large subunit
Mucilaginibacter yixingensis YX-36 DSM 26809 0.40 ABZR88_RS01535 2-oxoglutarate dehydrogenase E1 component 0.58 ABZR88_RS11595 3-isopropylmalate dehydratase large subunit
Sphingomonas koreensis DSMZ 15582 0.40 Ga0059261_1341 2-oxoglutarate dehydrogenase, E1 component 0.59 Ga0059261_4223 3-isopropylmalate dehydratase, large subunit
Pontibacter actiniarum KMM 6156, DSM 19842 0.40 CA264_18485 2-oxoglutarate dehydrogenase subunit E1 0.54 CA264_09435 3-isopropylmalate dehydratase large subunit

Not shown: 0 genomes with orthologs for b0726 only; 14 genomes with orthologs for b0072 only