| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Rhodospirillum rubrum S1H | 1.0 | Rru_A1678 | | Nitrogen Metabolism Transcriptional Regulator, NtrC, Fis Family (NCBI) | 1.0 | Rru_A1827 | | Glycine hydroxymethyltransferase (NCBI) | 0.65 | 14 |
| Magnetospirillum magneticum AMB-1 | 0.78 | AMB_RS11950 | | nitrogen regulation protein NR(I) | 0.72 | AMB_RS11815 | | serine hydroxymethyltransferase | — | — |
| Azospirillum brasilense Sp245 | 0.76 | AZOBR_RS14430 | | chemotaxis protein CheY | 0.72 | AZOBR_RS10015 | | serine hydroxymethyltransferase | — | — |
| Azospirillum sp. SherDot2 | 0.76 | MPMX19_01112 | | DNA-binding transcriptional regulator NtrC | 0.72 | MPMX19_00727 | | Serine hydroxymethyltransferase 2 | — | — |
| Bosea sp. OAE506 | 0.69 | ABIE41_RS16785 | | nitrogen regulation protein NR(I) | 0.69 | ABIE41_RS19780 | | serine hydroxymethyltransferase | — | — |
| Rhodopseudomonas palustris CGA009 | 0.69 | TX73_013420 | | nitrogen regulation protein NR(I) | 0.66 | TX73_014115 | | serine hydroxymethyltransferase | — | — |
| Sinorhizobium meliloti 1021 | 0.67 | SMc01043 | | nitrogen assimilation regulatory protein | 0.66 | SMc01770 | | serine hydroxymethyltransferase | 0.39 | 47 |
| Rhizobium sp. OAE497 | 0.67 | ABIE40_RS09090 | | nitrogen regulation protein NR(I) | 0.67 | ABIE40_RS06715 | | serine hydroxymethyltransferase | — | — |
| Agrobacterium fabrum C58 | 0.67 | Atu1446 | | two component response regulator | 0.67 | Atu1165 | | serine hydroxymethyltransferase | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.57 | CCNA_01815 | | nitrogen assimilation regulatory protein NtrC | 0.67 | CCNA_01419 | | serine hydroxymethyltransferase | — | — |
| Caulobacter crescentus NA1000 | 0.57 | CCNA_01815 | | nitrogen assimilation regulatory protein NtrC | 0.67 | CCNA_01419 | | serine hydroxymethyltransferase | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.51 | Ga0059261_0137 | | nitrogen regulation protein NR(I) | 0.65 | Ga0059261_1986 | | Glycine/serine hydroxymethyltransferase | 0.51 | 57 |
| Dinoroseobacter shibae DFL-12 | 0.44 | Dshi_1574 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | 0.70 | Dshi_0821 | | Glycine hydroxymethyltransferase (RefSeq) | low | > 64 |
| Pantoea sp. MT58 | 0.41 | IAI47_00450 | | nitrogen regulation protein NR(I) | 0.55 | IAI47_04960 | | serine hydroxymethyltransferase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.41 | Pf6N2E2_3826 | | Nitrogen regulation protein NR(I) | 0.57 | Pf6N2E2_4717 | | Serine hydroxymethyltransferase (EC 2.1.2.1) | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.41 | AO356_09730 | | nitrogen regulation protein NR(I) | 0.57 | AO356_13970 | | serine hydroxymethyltransferase | low | > 104 |
| Enterobacter asburiae PDN3 | 0.40 | EX28DRAFT_4350 | | nitrogen regulation protein NR(I) | 0.52 | EX28DRAFT_0099 | | Glycine/serine hydroxymethyltransferase | — | — |
| Shewanella amazonensis SB2B | 0.40 | Sama_3427 | | response regulator receiver protein (RefSeq) | 0.56 | Sama_1014 | glyA | serine hydroxymethyltransferase (RefSeq) | low | > 62 |
| Enterobacter sp. TBS_079 | 0.40 | MPMX20_04597 | | DNA-binding transcriptional regulator NtrC | 0.52 | MPMX20_03420 | | Serine hydroxymethyltransferase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.40 | PFLU_RS01685 | | nitrogen regulation protein NR(I) | 0.57 | PFLU_RS27825 | | serine hydroxymethyltransferase | 0.42 | 18 |
| Pseudomonas fluorescens SBW25 | 0.40 | PFLU_RS01685 | | nitrogen regulation protein NR(I) | 0.57 | PFLU_RS27825 | | serine hydroxymethyltransferase | low | > 109 |
| Marinobacter adhaerens HP15 | 0.40 | HP15_425 | | two-component response regulator NtrC | 0.58 | HP15_489 | | glycine hydroxymethyltransferase | — | — |
| Phaeobacter inhibens DSM 17395 | 0.40 | PGA1_c14790 | | nitrogen regulation protein NtrC | 0.73 | PGA1_c11870 | | serine hydroxymethyltransferase GlyA | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.40 | AO353_12145 | | nitrogen regulation protein NR(I) | 0.57 | AO353_14020 | | serine hydroxymethyltransferase | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.40 | Pf1N1B4_1611 | | Nitrogen regulation protein NR(I) | 0.57 | Pf1N1B4_2454 | | Serine hydroxymethyltransferase (EC 2.1.2.1) (from data) | low | > 87 |
| Pseudomonas simiae WCS417 | 0.40 | PS417_01635 | | nitrogen regulation protein NR(I) | 0.58 | PS417_26195 | | serine hydroxymethyltransferase | low | > 88 |
| Pseudomonas sp. S08-1 | 0.40 | OH686_10640 | | nitrogen regulation protein NR(I) | 0.57 | OH686_16230 | | Serine hydroxymethyltransferase | — | — |
| Pseudomonas sp. RS175 | 0.40 | PFR28_04944 | | DNA-binding transcriptional regulator NtrC | 0.57 | PFR28_03786 | | Serine hydroxymethyltransferase | — | — |
| Shewanella loihica PV-4 | 0.40 | Shew_3561 | | nitrogen metabolism transcriptional regulator, NtrC, Fis family (RefSeq) | 0.56 | Shew_1185 | glyA | serine hydroxymethyltransferase (RefSeq) | 0.71 | 22 |
| Variovorax sp. SCN45 | 0.40 | GFF3066 | | Nitrogen regulation protein NR(I), GlnG (=NtrC) | 0.56 | GFF560 | | Serine hydroxymethyltransferase (EC 2.1.2.1) | — | — |
| Acinetobacter radioresistens SK82 | 0.40 | MPMX26_01292 | | DNA-binding transcriptional regulator NtrC | 0.54 | MPMX26_02049 | | Serine hydroxymethyltransferase | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.40 | Psyr_4822 | | Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) | 0.56 | Psyr_4712 | | serine hydroxymethyltransferase | low | > 86 |
| Pseudomonas fluorescens GW456-L13 | 0.40 | PfGW456L13_347 | | Nitrogen regulation protein NR(I) | 0.57 | PfGW456L13_1116 | | Serine hydroxymethyltransferase (EC 2.1.2.1) | low | > 87 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.40 | Psyr_4822 | | Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) | 0.56 | Psyr_4712 | | serine hydroxymethyltransferase | — | — |
| Erwinia tracheiphila SCR3 | 0.40 | LU632_RS22135 | glnG | nitrogen regulation protein NR(I) | 0.54 | LU632_RS17915 | | serine hydroxymethyltransferase | — | — |
| Shewanella oneidensis MR-1 | 0.40 | SO4472 | ntrC | nitrogen regulation protein NR(I) (NCBI ptt file) | 0.55 | SO3471 | glyA | serine hydroxymethyltransferase (NCBI ptt file) | 0.60 | 66 |
| Shewanella sp. ANA-3 | 0.40 | Shewana3_0258 | | nitrogen metabolism transcriptional regulator, NtrC, Fis family (RefSeq) | 0.55 | Shewana3_1094 | glyA | serine hydroxymethyltransferase (RefSeq) | 0.77 | 14 |
| Serratia liquefaciens MT49 | 0.40 | IAI46_24960 | | nitrogen regulation protein NR(I) | 0.55 | IAI46_19395 | | serine hydroxymethyltransferase | — | — |
| Variovorax sp. OAS795 | 0.40 | ABID97_RS09945 | | nitrogen regulation protein NR(I) | 0.56 | ABID97_RS17890 | | serine hydroxymethyltransferase | — | — |
| Pectobacterium carotovorum WPP14 | 0.40 | HER17_RS21440 | | nitrogen regulation protein NR(I) | 0.56 | HER17_RS05950 | | serine hydroxymethyltransferase | — | — |
| Dickeya dianthicola ME23 | 0.40 | DZA65_RS22210 | | nitrogen regulation protein NR(I) | 0.57 | DZA65_RS16775 | | serine hydroxymethyltransferase | — | — |
| Dickeya dianthicola 67-19 | 0.40 | HGI48_RS21235 | | nitrogen regulation protein NR(I) | 0.56 | HGI48_RS15700 | | serine hydroxymethyltransferase | — | — |
| Escherichia fergusonii Becca | 0.39 | EFB2_04748 | | DNA-binding transcriptional regulator NtrC | 0.51 | EFB2_01345 | | Serine hydroxymethyltransferase | — | — |
| Dickeya dadantii 3937 | 0.39 | DDA3937_RS00125 | | nitrogen regulation protein NR(I) | 0.56 | DDA3937_RS15600 | | serine hydroxymethyltransferase | — | — |
| Rahnella sp. WP5 | 0.39 | EX31_RS15880 | | nitrogen regulation protein NR(I) | 0.54 | EX31_RS20585 | | serine hydroxymethyltransferase | — | — |
| Pseudomonas putida KT2440 | 0.39 | PP_5048 | | two-component system DNA-binding transcriptional dual regulator GlnL/GlnG | 0.57 | PP_0322 | | serine hydroxymethyltransferase | low | > 96 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.39 | GFF2220 | | Nitrogen regulation protein NR(I) | 0.52 | GFF2447 | | Serine hydroxymethyltransferase (EC 2.1.2.1) | — | — |
| Escherichia coli ECOR27 | 0.39 | NOLOHH_06240 | glnG | nitrogen regulation protein NR(I) | 0.51 | NOLOHH_13185 | glyA | serine hydroxymethyltransferase | low | > 75 |
| Escherichia coli ECRC102 | 0.39 | NIAGMN_11865 | glnG | nitrogen regulation protein NR(I) | 0.51 | NIAGMN_19280 | glyA | serine hydroxymethyltransferase | — | — |
| Klebsiella michiganensis M5al | 0.39 | BWI76_RS00385 | | nitrogen assimilation regulatory protein | 0.52 | BWI76_RS21225 | | serine hydroxymethyltransferase | — | — |
| Escherichia coli Nissle 1917 | 0.39 | ECOLIN_RS22295 | | nitrogen regulation protein NR(I) | 0.51 | ECOLIN_RS14440 | | serine hydroxymethyltransferase | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.39 | OHPLBJKB_04184 | | DNA-binding transcriptional regulator NtrC | 0.51 | OHPLBJKB_01156 | | Serine hydroxymethyltransferase | low | > 73 |
| Escherichia coli BW25113 | 0.39 | b3868 | glnG | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) | 0.51 | b2551 | glyA | serine hydroxymethyltransferase (NCBI) | — | — |
| Escherichia coli ECRC62 | 0.39 | BNILDI_05290 | glnG | nitrogen regulation protein NR(I) | 0.51 | BNILDI_11985 | glyA | serine hydroxymethyltransferase | low | > 75 |
| Escherichia coli ECRC100 | 0.39 | OKFHMN_14110 | glnG | nitrogen regulation protein NR(I) | 0.51 | OKFHMN_21510 | glyA | serine hydroxymethyltransferase | low | > 80 |
| Escherichia coli ECRC101 | 0.39 | MCAODC_04610 | glnG | nitrogen regulation protein NR(I) | 0.51 | MCAODC_12040 | glyA | serine hydroxymethyltransferase | low | > 87 |
| Escherichia coli ECRC99 | 0.39 | KEDOAH_14040 | glnG | nitrogen regulation protein NR(I) | 0.51 | KEDOAH_06710 | glyA | serine hydroxymethyltransferase | — | — |
| Escherichia coli ECRC98 | 0.39 | JDDGAC_17735 | glnG | nitrogen regulation protein NR(I) | 0.51 | JDDGAC_25175 | glyA | serine hydroxymethyltransferase | — | — |
| Dechlorosoma suillum PS | 0.39 | Dsui_1051 | | nitrogen regulation protein NR(I) | 0.63 | Dsui_2254 | | glycine/serine hydroxymethyltransferase | low | > 51 |
| Escherichia coli BL21 | 0.39 | ECD_03753 | | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein | 0.51 | ECD_02443 | | serine hydroxymethyltransferase | 0.41 | 11 |
| Escherichia coli ECOR38 | 0.39 | HEPCGN_12740 | glnG | nitrogen regulation protein NR(I) | 0.51 | HEPCGN_20655 | glyA | serine hydroxymethyltransferase | low | > 87 |
| Pseudomonas stutzeri RCH2 | 0.39 | Psest_3932 | | nitrogen regulation protein NR(I) | 0.57 | Psest_3404 | | Glycine/serine hydroxymethyltransferase | — | — |
| Alteromonas macleodii MIT1002 | 0.39 | MIT1002_03186 | | Nitrogen regulation protein NR(I) | 0.54 | MIT1002_02702 | | Serine hydroxymethyltransferase | 0.85 | 13 |
| Rhodanobacter denitrificans MT42 | 0.39 | LRK55_RS07730 | | nitrogen regulation protein NR(I) | 0.56 | LRK55_RS04400 | | serine hydroxymethyltransferase | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.39 | LRK54_RS07980 | | nitrogen regulation protein NR(I) | 0.56 | LRK54_RS04625 | | serine hydroxymethyltransferase | low | > 59 |
| Vibrio cholerae E7946 ATCC 55056 | 0.39 | CSW01_13865 | | nitrogen regulation protein NR(I) | 0.67 | CSW01_15340 | | serine hydroxymethyltransferase | low | > 62 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.39 | GFF5269 | | Nitrogen regulation protein NR(I) | 0.55 | GFF5152 | | Serine hydroxymethyltransferase (EC 2.1.2.1) | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.39 | QEN71_RS05675 | | nitrogen regulation protein NR(I) | 0.68 | QEN71_RS11055 | | serine hydroxymethyltransferase | low | > 153 |
| Paraburkholderia graminis OAS925 | 0.39 | ABIE53_002804 | | two-component system nitrogen regulation response regulator GlnG | 0.66 | ABIE53_006138 | | glycine hydroxymethyltransferase | low | > 113 |
| Burkholderia phytofirmans PsJN | 0.39 | BPHYT_RS12935 | | chemotaxis protein CheY | 0.67 | BPHYT_RS25180 | | serine hydroxymethyltransferase | low | > 109 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.38 | H281DRAFT_00454 | | nitrogen metabolism transcriptional regulator, NtrC, Fis family | 0.68 | H281DRAFT_00990 | | serine hydroxymethyltransferase (EC 2.1.2.1) | — | — |
| Ralstonia solanacearum PSI07 | 0.38 | RPSI07_RS17815 | | nitrogen regulation protein NR(I) | 0.55 | RPSI07_RS20330 | | serine hydroxymethyltransferase | low | > 81 |
| Cupriavidus basilensis FW507-4G11 | 0.38 | RR42_RS12980 | | chemotaxis protein CheY | 0.55 | RR42_RS15485 | | serine hydroxymethyltransferase | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.38 | Xcc-8004.252.1 | | Nitrogen regulation protein NtrC | 0.56 | Xcc-8004.4398.1 | | Serine hydroxymethyltransferase (EC 2.1.2.1) | low | > 74 |
| Lysobacter sp. OAE881 | 0.38 | ABIE51_RS01360 | | nitrogen regulation protein NR(I) | 0.57 | ABIE51_RS04620 | | serine hydroxymethyltransferase | low | > 62 |
| Ralstonia solanacearum IBSBF1503 | 0.38 | RALBFv3_RS15540 | | nitrogen regulation protein NR(I) | 0.56 | RALBFv3_RS12895 | | serine hydroxymethyltransferase | — | — |
| Ralstonia solanacearum UW163 | 0.38 | UW163_RS13000 | | nitrogen regulation protein NR(I) | 0.56 | UW163_RS00670 | | serine hydroxymethyltransferase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.38 | ABZR87_RS11070 | | nitrogen regulation protein NR(I) | 0.56 | ABZR87_RS08955 | | serine hydroxymethyltransferase | — | — |
| Herbaspirillum seropedicae SmR1 | 0.37 | HSERO_RS15680 | | chemotaxis protein CheY | 0.56 | HSERO_RS06140 | | serine hydroxymethyltransferase | — | — |
| Ralstonia solanacearum GMI1000 | 0.37 | RS_RS06320 | | nitrogen regulation protein NR(I) | 0.68 | RS_RS17460 | | serine hydroxymethyltransferase | — | — |
| Rhodanobacter sp. FW510-T8 | 0.37 | OKGIIK_14465 | ntrC | nitrogen regulation protein NR(I) | 0.55 | OKGIIK_11440 | glyA | serine hydroxymethyltransferase | — | — |
| Acidovorax sp. GW101-3H11 | 0.37 | Ac3H11_4432 | | Nitrogen regulation protein NR(I) | 0.57 | Ac3H11_2921 | | Serine hydroxymethyltransferase (EC 2.1.2.1) | — | — |
| Castellaniella sp019104865 MT123 | 0.37 | ABCV34_RS03540 | | nitrogen regulation protein NR(I) | 0.58 | ABCV34_RS06400 | | serine hydroxymethyltransferase | low | > 48 |
| Dyella japonica UNC79MFTsu3.2 | 0.37 | ABZR86_RS15515 | | nitrogen regulation protein NR(I) | 0.56 | ABZR86_RS10715 | | serine hydroxymethyltransferase | 0.80 | 3 |
| Parabacteroides merdae CL09T00C40 | 0.30 | HMPREF1078_RS14380 | | sigma-54 dependent transcriptional regulator | 0.48 | HMPREF1078_RS02145 | | serine hydroxymethyltransferase | low | > 61 |
Not shown: 0 genomes with orthologs for Rru_A1678 only; 15 genomes with orthologs for Rru_A1827 only