Homologs of Xcc-8004.2112.1 from Xanthomonas campestris pv. campestris strain 8004

Excinuclease cho (excinuclease ABC alternative C subunit)
SEED: Excinuclease cho (excinuclease ABC alternative C subunit)
KEGG: excinuclease Cho

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2112.1 Excinuclease cho (excinuclease ABC alternative C subunit) insig. 100 100
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS17530 excinuclease Cho cofit 51 89
o Pantoea sp. MT58 IAI47_11065 excinuclease Cho insig. 51 89
o Escherichia coli ECOR38 HEPCGN_05305 cho excinuclease Cho insig. 51 92
o Escherichia coli ECRC99 KEDOAH_01170 cho excinuclease Cho no data 50 92
o Escherichia coli ECOR27 NOLOHH_17455 cho excinuclease Cho insig. 51 92
o Escherichia coli Nissle 1917 ECOLIN_RS09710 excinuclease Cho insig. 51 92
o Escherichia coli ECRC62 BNILDI_16240 cho excinuclease Cho cofit 50 92
o Escherichia coli BL21 ECD_01710 endonuclease of nucleotide excision repair no data 50 92
o Escherichia coli ECRC100 OKFHMN_26940 cho excinuclease Cho cofit 50 92
o Escherichia coli ECRC102 NIAGMN_01125 cho excinuclease Cho insig. 50 92
o Escherichia coli ECRC98 JDDGAC_01515 cho excinuclease Cho insig. 50 92
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01991 Excinuclease cho insig. 50 92
o Escherichia coli BW25113 b1741 ydjQ endonuclease of nucleotide excision repair (NCBI) sig. 50 92
o Escherichia fergusonii Becca EFB2_02252 Excinuclease cho insig. 50 92
o Escherichia coli ECRC101 MCAODC_18470 cho excinuclease Cho insig. 50 92
o Rahnella sp. WP5 EX31_RS05180 excinuclease Cho insig. 48 94
o Klebsiella michiganensis M5al BWI76_RS11710 nucleotide excision repair endonuclease insig. 48 92
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3498 Excinuclease cho (excinuclease ABC alternative C subunit) insig. 49 92
o Enterobacter asburiae PDN3 EX28DRAFT_1745 GIY-YIG catalytic domain insig. 48 92
o Erwinia amylovora T8 OLJFJH_14770 excinuclease Cho insig. 47 90
o Enterobacter sp. TBS_079 MPMX20_01873 Excinuclease cho insig. 49 92
o Klebsiella pneumoniae MKP103 KDGMDA_19380 excinuclease Cho insig. 48 92
o Serratia liquefaciens MT49 IAI46_09070 endonuclease insig. 45 93
  Cupriavidus basilensis FW507-4G11 RR42_RS36200 ethanolamine utilization protein insig. 44 86
  Dechlorosoma suillum PS Dsui_0101 exonuclease, DNA polymerase III, epsilon subunit family cofit 37 90
  Methylophilus sp. DMC18 GFF1760 3'-5' exonuclease DinG insig. 40 91
  Herbaspirillum seropedicae SmR1 HSERO_RS11365 nuclease insig. 38 93
  Marinobacter adhaerens HP15 HP15_3043 DNA polymerase III, epsilon subunit cofit 34 89
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3320 GIY-YIG catalytic domain. insig. 29 91
  Cellulophaga baltica 18 M666_RS00695 exonuclease domain-containing protein insig. 24 78
  Cellulophaga baltica 18 M666_RS14615 exonuclease domain-containing protein insig. 27 71
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_07430 DNA repair nuclease with dnaQ and GIY-YIG domains (from data) strong 24 90
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS06310 excinuclease ABC subunit UvrC cofit 25 79
  Cellulophaga baltica 18 M666_RS03735 excinuclease ABC subunit UvrC cofit 26 77
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS07560 DNA polymerase III subunit epsilon insig. 24 82
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS13890 exonuclease domain-containing protein insig. 28 72
  Paraburkholderia sabiae LMG 24235 QEN71_RS03705 exonuclease domain-containing protein insig. 38 41
  Burkholderia phytofirmans PsJN BPHYT_RS15265 DNA polymerase III subunit epsilon insig. 37 41
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3186 Excinuclease ABC subunit C strong 32 65
  Variovorax sp. SCN45 GFF2859 Excinuclease ABC subunit C insig. 29 67
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03997 DNA polymerase-3 subunit epsilon insig. 36 41
  Variovorax sp. OAS795 ABID97_RS10635 excinuclease ABC subunit UvrC strong 29 62
  Acinetobacter radioresistens SK82 MPMX26_00228 UvrABC system protein C sig. 28 76
  Desulfovibrio vulgaris Miyazaki F DvMF_2845 excinuclease ABC, C subunit (RefSeq) strong 29 66
  Azospirillum brasilense Sp245 AZOBR_RS18630 excinuclease ABC subunit C insig. 34 66
  Acidovorax sp. GW101-3H11 Ac3H11_373 Excinuclease ABC subunit C strong 29 61
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS01670 excinuclease ABC subunit UvrC insig. 29 70
  Bacteroides thetaiotaomicron VPI-5482 BT3266 excinuclease ABC subunit C (NCBI ptt file) strong 27 68
  Paraburkholderia graminis OAS925 ABIE53_003223 DNA polymerase-3 subunit epsilon insig. 35 41
  Sphingobium sp. HT1-2 GFF3465 Excinuclease ABC subunit C cofit 32 60
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3847 Excinuclease ABC subunit C no data 28 78
  Dinoroseobacter shibae DFL-12 Dshi_0644 excinuclease ABC, C subunit (RefSeq) strong 32 60
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2477.1 Excinuclease ABC subunit C sig. 32 65
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2886 Excinuclease ABC subunit C sig. 31 66
  Lysobacter sp. OAE881 ABIE51_RS12455 excinuclease ABC subunit UvrC cofit 31 62
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02233 UvrABC system protein C cofit 31 69
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5618 Excinuclease ABC subunit C insig. 31 66
  Desulfovibrio vulgaris Hildenborough JW710 DVU0801 uvrC excinuclease ABC, C subunit (TIGR) insig. 29 65
  Pseudomonas sp. DMC3 GFF3645 UvrABC system protein C cofit 31 66
  Pseudomonas syringae pv. syringae B728a Psyr_2896 Excinuclease ABC subunit C strong 31 66
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2896 Excinuclease ABC subunit C strong 31 66
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2564 DNA repair nuclease with dnaQ and GIY-YIG domains (from data) strong 27 68
  Pseudomonas fluorescens SBW25 PFLU_RS10770 excinuclease ABC subunit UvrC insig. 30 67
  Pseudomonas fluorescens SBW25-INTG PFLU_RS10770 excinuclease ABC subunit UvrC insig. 30 67
  Pseudomonas simiae WCS417 PS417_10725 excinuclease ABC subunit C strong 30 65
  Caulobacter crescentus NA1000 CCNA_02975 excinuclease ABC subunit C strong 28 64
  Caulobacter crescentus NA1000 Δfur CCNA_02975 excinuclease ABC subunit C cofit 28 64
  Acinetobacter baumannii LAC-4 RR41_RS17435 excinuclease ABC subunit UvrC insig. 28 75
  Azospirillum sp. SherDot2 MPMX19_05963 UvrABC system protein C insig. 31 66
  Rhodanobacter sp. FW510-T8 OKGIIK_06930 uvrC excinuclease ABC subunit UvrC insig. 28 93
  Pseudomonas putida KT2440 PP_4098 UvrABC system protein C strong 31 66
  Pseudomonas stutzeri RCH2 Psest_2259 excinuclease ABC, C subunit strong 30 62
  Phocaeicola dorei CL03T12C01 ABI39_RS05415 excinuclease ABC subunit UvrC insig. 25 68
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS11525 excinuclease ABC subunit UvrC strong 25 68
  Marinobacter adhaerens HP15 HP15_1568 excinuclease ABC subunit C strong 29 66
  Azospirillum brasilense Sp245 AZOBR_RS08965 excinuclease ABC subunit C insig. 31 60
  Pseudomonas fluorescens FW300-N2E3 AO353_21835 excinuclease ABC subunit C strong 30 69
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS09770 excinuclease ABC subunit UvrC insig. 28 93
  Rhodanobacter denitrificans MT42 LRK55_RS00120 excinuclease ABC subunit UvrC strong 28 93
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS00380 excinuclease ABC subunit UvrC insig. 28 93
  Rhodospirillum rubrum S1H Rru_A2220 Excinuclease ABC, C subunit (NCBI) insig. 30 60
  Azospirillum sp. SherDot2 MPMX19_01070 UvrABC system protein C insig. 29 61
  Synechococcus elongatus PCC 7942 Synpcc7942_1945 uvrC excinuclease ABC subunit C strong 29 68
  Methanococcus maripaludis JJ MMJJ_RS01240 excinuclease ABC subunit UvrC insig. 24 59
  Paraburkholderia sabiae LMG 24235 QEN71_RS04665 excinuclease ABC subunit UvrC insig. 26 77
  Bacteroides ovatus ATCC 8483 BACOVA_01365 excinuclease ABC, C subunit cofit 26 68
  Methanococcus maripaludis S2 MMP_RS03810 excinuclease ABC subunit UvrC insig. 24 59
  Cupriavidus basilensis FW507-4G11 RR42_RS14000 excinuclease ABC subunit C strong 29 66
  Pseudomonas sp. BP01 JOY50_RS06865 uvrC excinuclease ABC subunit UvrC insig. 30 66
  Pseudomonas segetis P6 MPMX49_02521 UvrABC system protein C insig. 29 72
  Phaeobacter inhibens DSM 17395 PGA1_c02880 uvrABC system protein C strong 29 64
  Pseudomonas fluorescens FW300-N2C3 AO356_00350 excinuclease ABC subunit C strong 31 66
  Rhizobium sp. OAE497 ABIE40_RS06500 excinuclease ABC subunit UvrC no data 30 57
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS02245 excinuclease ABC subunit UvrC strong 27 92
  Pseudomonas aeruginosa PA14 IKLFDK_12970 excinuclease ABC subunit UvrC insig. 28 74
  Alteromonas macleodii MIT1002 MIT1002_02153 Excinuclease ABC subunit C insig. 28 59
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_16350 excinuclease ABC subunit C strong 23 80
  Synechocystis sp000284455 PCC 6803 SGL_RS07280 excinuclease ABC subunit UvrC insig. 29 61
  Agrobacterium fabrum C58 Atu1129 excinuclease ABC chain C strong 27 68