Homologs of SMc00904 from Sinorhizobium meliloti 1021

hypothetical protein
SEED: Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)
KEGG: ribosomal large subunit pseudouridine synthase B

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sinorhizobium meliloti 1021 SMc00904 hypothetical protein sig. 100 100
o Agrobacterium fabrum C58 Atu0689 ribosomal large subunit pseudouridine synthase B strong 55 97
o Rhizobium sp. OAE497 ABIE40_RS03760 pseudouridine synthase sig. 58 99
  Rhodopseudomonas palustris CGA009 TX73_005980 pseudouridine synthase insig. 63 46
  Xanthobacter sp. DMC5 GFF108 hypothetical protein insig. 68 42
  Magnetospirillum magneticum AMB-1 AMB_RS20865 rRNA pseudouridine synthase cofit 56 49
  Phaeobacter inhibens DSM 17395 PGA1_c22020 putative ribosomal large subunit pseudouridine synthase B insig. 57 45
  Dinoroseobacter shibae DFL-12 Dshi_2790 RNA-binding S4 domain protein (RefSeq) insig. 63 40
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04200 pseudouridine synthase insig. 58 40
  Caulobacter crescentus NA1000 CCNA_00230 ribosomal large subunit pseudouridine synthase B sig. 58 40
  Caulobacter crescentus NA1000 Δfur CCNA_00230 ribosomal large subunit pseudouridine synthase B cofit 58 40
  Rhodospirillum rubrum S1H Rru_A0652 Pseudouridine synthase, Rsu (NCBI) cofit 59 41
  Sphingobium sp. HT1-2 GFF1634 LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22) cofit 52 47
  Azospirillum sp. SherDot2 MPMX19_01627 hypothetical protein insig. 60 40
  Azospirillum brasilense Sp245 AZOBR_RS04495 ribosomal large subunit pseudouridine synthase B strong 58 42
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0245 pseudouridine synthase insig. 50 46
  Kangiella aquimarina DSM 16071 B158DRAFT_2311 ribosomal large subunit pseudouridine synthase B (EC 5.4.99.-) strong 46 37
  Rahnella sp. WP5 EX31_RS09940 23S rRNA pseudouridine(2605) synthase RluB cofit 40 39
  Pseudomonas aeruginosa PA14 IKLFDK_16155 23S rRNA pseudouridine(2605) synthase RluB cofit 40 43
  Pseudomonas sp. S08-1 OH686_20820 LSU rRNA pseudouridine(2605) synthase cofit 41 40
  Marinobacter adhaerens HP15 HP15_1530 RNA-binding S4 domain protein sig. 41 40
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS15665 rRNA pseudouridine synthase no data 38 41
  Ralstonia solanacearum UW163 UW163_RS13125 rRNA pseudouridine synthase no data 38 41
  Pseudomonas sp. BP01 JOY50_RS01055 rluB 23S rRNA pseudouridine(2605) synthase RluB insig. 38 55
  Ralstonia solanacearum PSI07 RPSI07_RS17690 23S rRNA pseudouridylate synthase B strong 38 41
  Ralstonia solanacearum GMI1000 RS_RS06445 23S rRNA pseudouridylate synthase B strong 39 41
  Ralstonia sp. UNC404CL21Col ABZR87_RS11195 pseudouridine synthase strong 40 41
  Pseudomonas fluorescens FW300-N2E3 AO353_18540 pseudouridine synthase strong 41 39
  Pseudomonas putida KT2440 PP_4496 23S rRNA pseudouridine 2605 synthase no data 38 55
  Pseudomonas fluorescens FW300-N2C3 AO356_18515 pseudouridine synthase insig. 40 39
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5629 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) insig. 40 39
  Pseudomonas fluorescens SBW25 PFLU_RS23890 pseudouridine synthase cofit 41 39
  Pseudomonas fluorescens SBW25-INTG PFLU_RS23890 pseudouridine synthase sig. 41 39
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04587 hypothetical protein cofit 41 39
  Pseudomonas sp. DMC3 GFF2404 hypothetical protein insig. 41 39
  Pseudomonas sp. RS175 PFR28_03314 hypothetical protein no data 41 39
  Cupriavidus basilensis FW507-4G11 RR42_RS12860 pseudouridine synthase strong 41 38
  Dechlorosoma suillum PS Dsui_2725 pseudouridine synthase family protein no data 41 43
  Pseudomonas sp. SVBP6 COO64_RS21735 rluB 23S rRNA pseudouridine(2605) synthase RluB sig. 41 41
  Pseudomonas syringae pv. syringae B728a Psyr_3581 ribosomal large subunit pseudouridine synthase B strong 41 43
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3581 ribosomal large subunit pseudouridine synthase B strong 41 43
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3555 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) no data 41 39
  Pseudomonas simiae WCS417 PS417_22250 pseudouridine synthase sig. 40 40
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4401 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) insig. 40 41
  Paraburkholderia graminis OAS925 ABIE53_001827 23S rRNA pseudouridine2605 synthase no data 38 39
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05101 ribosomal large subunit pseudouridine synthase B (EC 5.4.99.-) no data 39 39
  Pectobacterium carotovorum WPP14 HER17_RS10900 23S rRNA pseudouridine(2605) synthase RluB strong 39 39
  Shewanella sp. ANA-3 Shewana3_1525 ribosomal large subunit pseudouridine synthase B (RefSeq) strong 41 39
  Burkholderia phytofirmans PsJN BPHYT_RS08050 pseudouridine synthase no data 38 39
  Pseudomonas stutzeri RCH2 Psest_1999 pseudouridine synthase insig. 34 68
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4868 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) cofit 42 37
  Dickeya dianthicola 67-19 HGI48_RS10500 23S rRNA pseudouridine(2605) synthase RluB sig. 42 37
  Dickeya dianthicola ME23 DZA65_RS10980 23S rRNA pseudouridine(2605) synthase RluB sig. 42 37
  Serratia liquefaciens MT49 IAI46_13995 23S rRNA pseudouridine(2605) synthase RluB insig. 41 37
  Paraburkholderia sabiae LMG 24235 QEN71_RS23115 pseudouridine synthase no data 39 39
  Herbaspirillum seropedicae SmR1 HSERO_RS18010 pseudouridine synthase strong 36 43
  Acidovorax sp. GW101-3H11 Ac3H11_1789 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) no data 40 37
  Castellaniella sp019104865 MT123 ABCV34_RS02110 23S rRNA pseudouridine(2605) synthase RluB no data 42 37
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS06975 23S rRNA pseudouridine(2605) synthase RluB strong 39 37
  Rhizobium sp. OAE497 ABIE40_RS15330 pseudouridine synthase cofit 40 42
  Alteromonas macleodii MIT1002 MIT1002_01435 Ribosomal large subunit pseudouridine synthase B cofit 40 39
  Pantoea sp. MT58 IAI47_09210 23S rRNA pseudouridine(2605) synthase RluB sig. 39 37
  Shewanella amazonensis SB2B Sama_2124 pseudouridine synthase, Rsu (RefSeq) strong 39 39
  Dickeya dadantii 3937 DDA3937_RS10500 23S rRNA pseudouridine(2605) synthase RluB strong 41 37
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2719 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) sig. 39 39
  Erwinia amylovora T8 OLJFJH_13510 23S rRNA pseudouridine(2605) synthase RluB strong 43 37
  Variovorax sp. OAS795 ABID97_RS14200 pseudouridine synthase strong 41 38
  Shewanella loihica PV-4 Shew_2246 pseudouridine synthase (RefSeq) sig. 40 39
  Klebsiella pneumoniae MKP103 KDGMDA_19590 23S rRNA pseudouridine(2605) synthase RluB sig. 40 39
  Enterobacter sp. TBS_079 MPMX20_02507 Ribosomal large subunit pseudouridine synthase B sig. 41 41
  Klebsiella michiganensis M5al BWI76_RS11880 23S rRNA pseudouridylate synthase B strong 40 39
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_23550 rluB 23S rRNA pseudouridine(2605) synthase RluB cofit 41 37
  Erwinia tracheiphila SCR3 LU632_RS12730 rluB 23S rRNA pseudouridine(2605) synthase RluB cofit 41 37
  Variovorax sp. SCN45 GFF990 LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22) cofit 39 38
  Rhodanobacter sp. FW510-T8 OKGIIK_06425 Pseudouridine synthase insig. 42 37
  Enterobacter asburiae PDN3 EX28DRAFT_0940 pseudouridine synthase cofit 41 41
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS09485 rRNA pseudouridine synthase insig. 41 40
  Rhodanobacter denitrificans MT42 LRK55_RS00590 pseudouridine synthase no data 41 37
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS00815 pseudouridine synthase strong 41 37
  Rhodanobacter denitrificans MT42 LRK55_RS00435 pseudouridine synthase cofit 42 38
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS00665 rRNA pseudouridine synthase insig. 42 38
  Escherichia coli BL21 ECD_01245 23S rRNA pseudouridine(2605) synthase strong 39 39
  Escherichia coli ECOR38 HEPCGN_25560 rluB 23S rRNA pseudouridine(2605) synthase RluB sig. 39 39
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02415 Ribosomal large subunit pseudouridine synthase B strong 39 39
  Escherichia coli BW25113 b1269 rluB 23S rRNA pseudouridylate synthase (NCBI) strong 39 39
  Sinorhizobium meliloti 1021 SM_b20024 ribosomal large subunit pseudouridine synthase B insig. 43 38
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS09315 pseudouridine synthase insig. 42 37
  Escherichia coli ECOR27 NOLOHH_20295 rluB 23S rRNA pseudouridine(2605) synthase RluB cofit 39 39
  Escherichia coli ECRC100 OKFHMN_02630 rluB 23S rRNA pseudouridine(2605) synthase RluB cofit 39 39
  Escherichia coli ECRC101 MCAODC_15635 rluB 23S rRNA pseudouridine(2605) synthase RluB sig. 39 39
  Escherichia coli ECRC102 NIAGMN_26800 rluB 23S rRNA pseudouridine(2605) synthase RluB no data 39 39
  Escherichia coli ECRC62 BNILDI_18445 rluB 23S rRNA pseudouridine(2605) synthase RluB strong 39 39
  Escherichia coli ECRC98 JDDGAC_05175 rluB 23S rRNA pseudouridine(2605) synthase RluB insig. 39 39
  Escherichia coli ECRC99 KEDOAH_26135 rluB 23S rRNA pseudouridine(2605) synthase RluB no data 39 39
  Escherichia fergusonii Becca EFB2_02658 Ribosomal large subunit pseudouridine synthase B insig. 38 39
  Escherichia coli Nissle 1917 ECOLIN_RS07635 23S rRNA pseudouridine(2605) synthase RluB insig. 38 39
o Lysobacter sp. OAE881 ABIE51_RS08775 pseudouridine synthase sig. 42 41
  Methylophilus sp. DMC18 GFF891 hypothetical protein insig. 38 37
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS02135 pseudouridine synthase insig. 42 37
  Rhodanobacter sp. FW510-T8 OKGIIK_06590 Pseudouridine synthase insig. 39 39