| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
|---|
| | Sinorhizobium meliloti 1021 | SMa1227 | | response regulator FixJ | cofit | 100 | 100 |
| o | Rhizobium sp. OAE497 | ABIE40_RS23715 | | response regulator | insig. | 54 | 97 |
| o | Caulobacter crescentus NA1000 | CCNA_00795 | | two-component response regulator FixJ | strong | 53 | 98 |
| o | Caulobacter crescentus NA1000 Δfur | CCNA_00795 | | two-component response regulator FixJ | cofit | 53 | 98 |
| o | Xanthobacter sp. DMC5 | GFF3781 | | Transcriptional regulatory protein FixJ | insig. | 50 | 97 |
| o | Sphingomonas koreensis DSMZ 15582 | Ga0059261_4074 | | two component transcriptional regulator, LuxR family | insig. | 49 | 99 |
| o | Rhodopseudomonas palustris CGA009 | TX73_022010 | | response regulator FixJ | no data | 49 | 98 |
| o | Sphingobium sp. HT1-2 | GFF3048 | | Two-component nitrogen fixation transcriptional regulator FixJ | cofit | 49 | 98 |
| o | Marinobacter adhaerens HP15 | HP15_1053 | | two component transcriptional regulator, LuxR family | sig. | 47 | 97 |
| | Sphingobium sp. HT1-2 | GFF5226 | | Two-component nitrogen fixation transcriptional regulator FixJ | insig. | 44 | 97 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_3828 | | two component transcriptional regulator, LuxR family | insig. | 44 | 99 |
| | Sphingobium sp. HT1-2 | GFF5392 | | Two-component nitrogen fixation transcriptional regulator FixJ | cofit | 44 | 97 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS24605 | | DNA-binding response regulator | no data | 49 | 92 |
| o | Shewanella loihica PV-4 | Shew_3240 | | two component LuxR family transcriptional regulator (RefSeq) | insig. | 46 | 94 |
| o | Azospirillum sp. SherDot2 | MPMX19_03016 | | Response regulator protein TmoT | no data | 46 | 99 |
| o | Azospirillum brasilense Sp245 | AZOBR_RS24030 | | chemotaxis protein CheY | no data | 46 | 98 |
| | Dechlorosoma suillum PS | Dsui_1581 | | response regulator | strong | 47 | 95 |
| o | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS15535 | | response regulator | no data | 44 | 98 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS07355 | | LuxR family transcriptional regulator | no data | 48 | 95 |
| o | Castellaniella sp019104865 MT123 | ABCV34_RS04170 | | response regulator transcription factor | no data | 47 | 97 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS04575 | | DNA-binding response regulator | insig. | 47 | 95 |
| | Sphingobium sp. HT1-2 | GFF1112 | | Two-component transcriptional response regulator, LuxR family | cofit | 45 | 89 |
| o | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4893 | | Nitrogen regulation protein NR(I) | cofit | 46 | 95 |
| o | Variovorax sp. OAS795 | ABID97_RS14090 | | response regulator transcription factor | strong | 45 | 98 |
| o | Ralstonia sp. UNC404CL21Col | ABZR87_RS13480 | | response regulator transcription factor | no data | 48 | 95 |
| o | Variovorax sp. SCN45 | GFF965 | | Two-component transcriptional response regulator, LuxR family | no data | 45 | 95 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS12850 | | LuxR family transcriptional regulator | no data | 43 | 100 |
| o | Paraburkholderia graminis OAS925 | ABIE53_002795 | | FixJ family two-component response regulator | no data | 43 | 100 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00464 | | two component transcriptional regulator, LuxR family | no data | 44 | 97 |
| o | Ralstonia solanacearum GMI1000 | RS_RS08045 | | DNA-binding response regulator | strong | 47 | 95 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS05715 | | oxygen response regulator transcription factor FixJ | no data | 43 | 100 |
| o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS01680 | | DNA-binding response regulator | no data | 47 | 95 |
| o | Ralstonia solanacearum UW163 | UW163_RS14990 | | DNA-binding response regulator | no data | 47 | 95 |
| | Azospirillum sp. SherDot2 | MPMX19_04701 | | Transcriptional regulatory protein FixJ | insig. | 45 | 95 |
| | Azospirillum brasilense Sp245 | AZOBR_RS17625 | | Nodulation protein W | no data | 45 | 94 |
| o | Acidovorax sp. GW101-3H11 | Ac3H11_4095 | | Nitrogen regulation protein NR(I) | strong | 44 | 95 |
| o | Ralstonia solanacearum PSI07 | RPSI07_RS15805 | | DNA-binding response regulator | no data | 47 | 95 |
| | Azospirillum brasilense Sp245 | AZOBR_RS09615 | | LuxR family transcriptional regulator | no data | 44 | 96 |
| o | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS13745 | | response regulator | no data | 45 | 95 |
| | Azospirillum brasilense Sp245 | AZOBR_RS23775 | | LuxR family transcriptional regulator | no data | 46 | 94 |
| | Dechlorosoma suillum PS | Dsui_2511 | | response regulator | insig. | 46 | 94 |
| | Rhodospirillum rubrum S1H | Rru_A1500 | | Signal Transduction Histidine Kinase (STHK) with CheB and CheR activity (NCBI) | insig. | 45 | 97 |
| | Variovorax sp. OAS795 | ABID97_RS16350 | | response regulator | no data | 42 | 93 |
| | Azospirillum sp. SherDot2 | MPMX19_00657 | | Response regulator protein TmoT | no data | 46 | 94 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS04570 | | DNA-binding response regulator | no data | 43 | 96 |
| | Sinorhizobium meliloti 1021 | SMa0940 | | Response regulator | insig. | 42 | 94 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_4674 | | Nitrogen regulation protein NR(I) | no data | 42 | 93 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_1205 | | Two-component response regulator | strong | 43 | 98 |
| o | Herbaspirillum seropedicae SmR1 | HSERO_RS06700 | | LuxR family transcriptional regulator | insig. | 40 | 93 |
| | Variovorax sp. SCN45 | GFF192 | | Nitrogen regulation protein NR(I), GlnG (=NtrC) | no data | 42 | 93 |
| | Rhodopseudomonas palustris CGA009 | TX73_006750 | | response regulator | insig. | 41 | 96 |
| | Lysobacter sp. OAE881 | ABIE51_RS11970 | | response regulator transcription factor | insig. | 44 | 97 |
| | Xanthobacter sp. DMC5 | GFF4035 | | Response regulator protein TmoT | no data | 43 | 96 |
| | Dechlorosoma suillum PS | Dsui_3160 | | response regulator | strong | 41 | 93 |
| | Shewanella sp. ANA-3 | Shewana3_0637 | | two component LuxR family transcriptional regulator (RefSeq) | insig. | 43 | 92 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1673 | | Nitrogen regulation protein NR(I) | insig. | 42 | 93 |
| | Xanthobacter sp. DMC5 | GFF483 | | Sensor histidine kinase RcsC | insig. | 44 | 97 |
| | Azospirillum brasilense Sp245 | AZOBR_RS22615 | | chemotaxis protein CheY | no data | 41 | 95 |
| | Shewanella sp. ANA-3 | Shewana3_3697 | | two component LuxR family transcriptional regulator (RefSeq) | insig. | 37 | 95 |
| | Pseudomonas sp. S08-1 | OH686_18645 | | Two-component transcriptional response regulator, LuxR family | insig. | 41 | 94 |
| | Agrobacterium fabrum C58 | Atu4805 | | two component sensor kinase/response regulator hybrid | insig. | 42 | 97 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_1126 | | Response regulator | insig. | 40 | 100 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01880 | | two component transcriptional regulator, LuxR family | insig. | 42 | 96 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3749 | | Nitrogen regulation protein NR(I) | insig. | 40 | 94 |
| | Agrobacterium fabrum C58 | Atu4774 | | two component response regulator | insig. | 42 | 94 |
| | Dickeya dadantii 3937 | DDA3937_RS07235 | | response regulator transcription factor | insig. | 42 | 93 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03395 | | two component transcriptional regulator, LuxR family | insig. | 40 | 96 |
| | Shewanella oneidensis MR-1 | SO4157 | | DNA-binding response regulator (NCBI ptt file) | insig. | 36 | 93 |
| | Xanthobacter sp. DMC5 | GFF670 | | Response regulator protein TmoT | no data | 39 | 94 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS39350 | | response regulator transcription factor | no data | 38 | 99 |
| | Dechlorosoma suillum PS | Dsui_2080 | | response regulator | cofit | 46 | 96 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS11910 | | chemotaxis protein CheY | no data | 41 | 95 |
| | Pseudomonas sp. DMC3 | GFF1098 | | Response regulator protein TodT | no data | 42 | 97 |
| | Pseudomonas sp. RS175 | PFR28_02131 | | Response regulator protein TmoT | insig. | 39 | 95 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2537 | | Two-component response regulator | strong | 42 | 90 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS30660 | | response regulator transcription factor | no data | 39 | 96 |
| o | Dinoroseobacter shibae DFL-12 | Dshi_2568 | | two component transcriptional regulator, LuxR family (RefSeq) | cofit | 40 | 95 |
| | Lysobacter sp. OAE881 | ABIE51_RS09725 | | response regulator | no data | 43 | 94 |
| | Pseudomonas simiae WCS417 | PS417_10320 | | hypothetical protein | insig. | 43 | 89 |
| o | Pseudomonas segetis P6 | ACVTMO_RS10065 | | response regulator transcription factor | insig. | 38 | 97 |
| o | Shewanella amazonensis SB2B | Sama_3183 | | response regulator receiver protein (RefSeq) | insig. | 41 | 94 |
| | Agrobacterium fabrum C58 | Atu4300 | | two component response regulator | insig. | 41 | 88 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS07490 | | response regulator | no data | 40 | 95 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_25435 | | nodulation protein NolW | insig. | 40 | 94 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4408 | | two-component response regulator | insig. | 39 | 96 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS03440 | | response regulator | insig. | 41 | 94 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS13990 | | response regulator | insig. | 41 | 95 |
| | Pseudomonas putida KT2440 | PP_3551 | | DNA-binding response regulator, LuxR family | strong | 36 | 98 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_21605 | | two-component system response regulator BfiR | sig. | 36 | 96 |
| o | Pseudomonas sp. BP01 | JOY50_RS28135 | | response regulator transcription factor | insig. | 36 | 98 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS10740 | | LuxR family transcriptional regulator | insig. | 38 | 95 |
| | Sinorhizobium meliloti 1021 | SMa0759 | | hypothetical protein | insig. | 84 | 40 |
| | Rhizobium sp. OAE497 | ABIE40_RS15215 | | response regulator | insig. | 41 | 94 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_5088 | | regulatory protein, LuxR:Response regulator receiver | strong | 41 | 94 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_5088 | | regulatory protein, LuxR:Response regulator receiver | insig. | 41 | 94 |
| | Paraburkholderia graminis OAS925 | ABIE53_001505 | | FixJ family two-component response regulator | insig. | 39 | 99 |
| o | Pseudomonas aeruginosa MRSN321 | DY961_RS28470 | bfiR;inference=COORDINATES | two-component system response regulator BfiR | insig. | 36 | 96 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS31420 | | LuxR family transcriptional regulator | insig. | 40 | 97 |
| | Pseudomonas segetis P6 | ACVTMO_RS02215 | | response regulator transcription factor | insig. | 39 | 97 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS04230 | | LuxR family transcriptional regulator | strong | 44 | 93 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1724 | | DNA-binding response regulator, LuxR family | no data | 35 | 98 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS49310 | bfiR;inference=COORDINATES | two-component system response regulator BfiR | sig. | 36 | 96 |
| | Paraburkholderia graminis OAS925 | ABIE53_002569 | | FixJ family two-component response regulator | insig. | 41 | 95 |
| o | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3576 | | Tetrathionate reductase two-component response regulator | insig. | 43 | 93 |
| | Rhizobium sp. OAE497 | ABIE40_RS12250 | | response regulator | insig. | 43 | 95 |
| | Rhodopseudomonas palustris CGA009 | TX73_010870 | | response regulator | insig. | 40 | 93 |
| | Sinorhizobium meliloti 1021 | SMa1686 | | Two-component response regulator | insig. | 39 | 94 |
| o | Pseudomonas sp. SVBP6 | COO64_RS17310 | | response regulator transcription factor | insig. | 36 | 99 |
| | Paraburkholderia graminis OAS925 | ABIE53_005785 | | FixJ family two-component response regulator | no data | 45 | 94 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_22615 | | nodulation protein NolW | no data | 42 | 95 |
| | Pseudomonas sp. DMC3 | GFF2809 | | Protein-glutamate methylesterase/protein-glutamine glutaminase | insig. | 39 | 93 |
| | Variovorax sp. OAS795 | ABID97_RS01990 | | response regulator | no data | 44 | 92 |
| | Variovorax sp. SCN45 | GFF5447 | | Two-component transcriptional response regulator, LuxR family | no data | 43 | 92 |
| | Marinobacter adhaerens HP15 | HP15_1037 | | two-component response regulator | sig. | 35 | 97 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS22535 | | LuxR family transcriptional regulator | insig. | 40 | 95 |
| | Rhizobium sp. OAE497 | ABIE40_RS15185 | | response regulator | insig. | 39 | 93 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS37545 | | response regulator | insig. | 36 | 96 |
| | Dechlorosoma suillum PS | Dsui_3386 | | response regulator | no data | 41 | 94 |
| | Azospirillum sp. SherDot2 | MPMX19_02868 | | Response regulator protein TmoT | insig. | 39 | 94 |
| | Pseudomonas protegens RBAN4 | FABNJH_11275 | | Nodulation protein W | insig. | 34 | 96 |
| | Variovorax sp. OAS795 | ABID97_RS26300 | | response regulator | no data | 41 | 95 |
| | Shewanella oneidensis MR-1 | SO1416 | | DNA-binding response regulator (NCBI ptt file) | insig. | 40 | 82 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS08340 | | chemotaxis protein CheY | insig. | 39 | 95 |
| o | Klebsiella michiganensis M5al | BWI76_RS14640 | | DNA-binding response regulator | no data | 40 | 92 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS25965 | | LuxR family transcriptional regulator | insig. | 38 | 94 |
| | Pseudomonas sp. RS175 | PFR28_02521 | | Response regulator protein TmoT | no data | 37 | 94 |
| | Shewanella amazonensis SB2B | Sama_2399 | | response regulator receiver protein (RefSeq) | insig. | 39 | 92 |
| | Shewanella loihica PV-4 | Shew_0609 | | two component LuxR family transcriptional regulator (RefSeq) | insig. | 38 | 94 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01776 | | two component transcriptional regulator, LuxR family | insig. | 36 | 96 |
| | Agrobacterium fabrum C58 | Atu1116 | | two component response regulator | insig. | 35 | 96 |
| | Azospirillum sp. SherDot2 | MPMX19_03583 | | Response regulator protein TodT | no data | 39 | 94 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS35950 | | chemotaxis protein CheY | no data | 39 | 93 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05022 | | two component transcriptional regulator, LuxR family | insig. | 38 | 98 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS21035 | | response regulator | insig. | 39 | 93 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13516_RS20545 | | response regulator transcription factor | cofit | 38 | 94 |
| | Serratia liquefaciens MT49 | IAI46_04860 | | response regulator transcription factor | sig. | 38 | 92 |
| | Pseudomonas putida KT2440 | PP_5241 | | DNA-binding response regulator, LuxR family | sig. | 35 | 93 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_3789 | | two component transcriptional regulator, LuxR family | insig. | 34 | 95 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3995 | | Helix-turn-helix, Fis-type | sig. | 47 | 66 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3995 | | Helix-turn-helix, Fis-type | insig. | 47 | 66 |
| o | Enterobacter sp. TBS_079 | MPMX20_01965 | | Response regulator protein TmoT | insig. | 36 | 94 |
| | Rhodopseudomonas palustris CGA009 | TX73_008645 | | response regulator | cofit | 37 | 94 |
| | Sinorhizobium meliloti 1021 | SM_b20869 | | two-component response regulator protein | insig. | 42 | 88 |
| | Pseudomonas putida KT2440 | PP_1401 | | C4-dicarboxylate transport transcriptional regulatory protein | strong | 41 | 75 |
| | Serratia liquefaciens MT49 | IAI46_06840 | | response regulator transcription factor | insig. | 33 | 94 |
| | Sphingobium sp. HT1-2 | GFF5009 | | Two-component transcriptional response regulator, LuxR family | cofit | 41 | 73 |
| | Shewanella loihica PV-4 | Shew_1969 | | two component LuxR family transcriptional regulator (RefSeq) | insig. | 36 | 87 |
| | Pantoea sp. MT58 | IAI47_20275 | | response regulator transcription factor | insig. | 37 | 94 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_3507 | | Response regulator | insig. | 41 | 78 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS34645 | | LuxR family transcriptional regulator | no data | 38 | 89 |
| | Pseudomonas sp. BP01 | JOY50_RS14530 | | sigma-54 dependent transcriptional regulator | insig. | 40 | 75 |
| | Lysobacter sp. OAE881 | ABIE51_RS03450 | | response regulator | insig. | 36 | 96 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS06435 | | response regulator | insig. | 39 | 93 |
| | Pseudomonas protegens RBAN4 | FABNJH_24290 | dctD | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 40 | 75 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS33050 | | LuxR family transcriptional regulator | insig. | 35 | 95 |
| | Pseudomonas sp. SVBP6 | COO64_RS26185 | | sigma-54 dependent transcriptional regulator | insig. | 41 | 67 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS09930 | | response regulator | insig. | 38 | 88 |
| | Pseudomonas sp. RS175 | PFR28_03462 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | strong | 40 | 75 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_03805 | | C4-dicarboxylate ABC transporter | strong | 40 | 75 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_17800 | | C4-dicarboxylate ABC transporter | strong | 40 | 75 |
| | Pseudomonas sp. DMC3 | GFF5041 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | cofit | 40 | 75 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5487 | | Nitrogen regulation protein NR(I) | strong | 40 | 75 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_685 | | Nitrogen regulation protein NR(I) | no data | 39 | 75 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_1806 | | Nitrogen regulation protein NR(I) | strong | 39 | 75 |
| | Pseudomonas simiae WCS417 | PS417_22645 | | C4-dicarboxylate ABC transporter | sig. | 39 | 75 |
| | Variovorax sp. SCN45 | GFF1896 | | Two-component transcriptional response regulator, LuxR family | insig. | 40 | 92 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS24280 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 39 | 74 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS24280 | | sigma-54-dependent Fis family transcriptional regulator | strong | 39 | 74 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_25855 | | DNA-binding response regulator | sig. | 45 | 59 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04682 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | cofit | 45 | 56 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS25855 | | sigma-54 dependent transcriptional regulator | strong | 44 | 59 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS58285 | | sigma-54 dependent transcriptional regulator | strong | 44 | 59 |
| | Pseudomonas orientalis W4I3 | QF045_RS24815 | | sigma-54 dependent transcriptional regulator | insig. | 39 | 75 |
| | Agrobacterium fabrum C58 | Atu0114 | | two component response regulator | insig. | 48 | 59 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS34725 | | transcriptional regulator | insig. | 33 | 94 |
| | Pseudomonas segetis P6 | ACVTMO_RS01055 | | sigma-54-dependent transcriptional regulator | insig. | 43 | 56 |
| | Agrobacterium fabrum C58 | Atu3296 | | two component response regulator for C4-dicarboxylate transport | strong | 42 | 59 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS16810 | | Fis family transcriptional regulator | strong | 45 | 55 |
| | Pseudomonas stutzeri RCH2 | Psest_4132 | | alpha-ketoglutarate DNA-binding response regulator (mifR) (from data) | strong | 45 | 55 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c13440 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | no data | 43 | 56 |
| | Rhizobium sp. OAE497 | ABIE40_RS15425 | | sigma-54 dependent transcriptional regulator | strong | 41 | 59 |
| | Dinoroseobacter shibae DFL-12 | Dshi_1081 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | strong | 43 | 56 |
| | Pseudomonas sp. S08-1 | OH686_14355 | | C4-dicarboxylate transport transcriptional regulatory protein | strong | 43 | 56 |
| | Sinorhizobium meliloti 1021 | SM_b21200 | | two-component response regulator protein | insig. | 42 | 58 |
| | Sphingobium sp. HT1-2 | GFF159 | | hypothetical protein | cofit | 43 | 59 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS08380 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 42 | 59 |
| | Azospirillum sp. SherDot2 | MPMX19_04251 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 47 | 57 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS10795 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 41 | 57 |
| | Ralstonia solanacearum UW163 | UW163_RS02785 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 41 | 57 |
| | Paraburkholderia graminis OAS925 | ABIE53_000648 | | two-component system C4-dicarboxylate transport response regulator DctD | insig. | 43 | 57 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS06635 | | sigma-54 dependent transcriptional regulator | strong | 42 | 57 |
| | Azospirillum brasilense Sp245 | AZOBR_RS21130 | | Fis family transcriptional regulator | insig. | 47 | 57 |
| | Ralstonia solanacearum GMI1000 | RS_RS01635 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 41 | 57 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS22520 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 41 | 57 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS11680 | dctD;inference=COORDINATES | two-component system response regulator DctD | strong | 41 | 56 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_27655 | | two-component system response regulator DctD | strong | 41 | 56 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS50420 | dctD;inference=COORDINATES | two-component system response regulator DctD | strong | 41 | 56 |
| | Sinorhizobium meliloti 1021 | SM_b20613 | | C4-dicarboxylate transport transcriptional regulator | strong | 40 | 57 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02037 | | two component, sigma54 specific, transcriptional regulator, NtrC subfamily, Fis family | cofit | 42 | 57 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS01375 | | sigma-54 dependent transcriptional regulator | strong | 41 | 57 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS01400 | | sigma-54-dependent Fis family transcriptional regulator | strong | 42 | 55 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS01400 | | sigma-54-dependent Fis family transcriptional regulator | strong | 42 | 55 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_401 | | C4-dicarboxylate transport transcriptional regulatory protein | strong | 42 | 55 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3883 | | C4-dicarboxylate transport transcriptional regulatory protein | strong | 41 | 54 |
| | Pseudomonas stutzeri RCH2 | Psest_4267 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | strong | 38 | 74 |
| | Pseudomonas orientalis W4I3 | QF045_RS04425 | | sigma-54 dependent transcriptional regulator | cofit | 42 | 55 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_00486 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | cofit | 38 | 74 |
| | Pseudomonas simiae WCS417 | PS417_01305 | | Fis family transcriptional regulator | sig. | 38 | 74 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_0931 | | Response regulator | insig. | 32 | 90 |
| | Xanthobacter sp. DMC5 | GFF2901 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 45 | 56 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS01705 | | Fis family transcriptional regulator | insig. | 44 | 57 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS02520 | | Fis family transcriptional regulator | strong | 41 | 57 |
| | Pseudomonas protegens RBAN4 | FABNJH_01565 | dctD | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 41 | 55 |
| | Pseudomonas sp. DMC3 | GFF4159 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 41 | 54 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_10065 | | Fis family transcriptional regulator | strong | 41 | 55 |
| | Azospirillum sp. SherDot2 | MPMX19_05978 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 44 | 56 |
| | Dinoroseobacter shibae DFL-12 | Dshi_1196 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | strong | 41 | 56 |
| | Pseudomonas sp. SVBP6 | COO64_RS00595 | | sigma-54 dependent transcriptional regulator | insig. | 40 | 55 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_11860 | | Fis family transcriptional regulator | strong | 40 | 55 |
| | Azospirillum sp. SherDot2 | MPMX19_00220 | | Transcriptional regulatory protein FixJ | no data | 37 | 95 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1666 | | C4-dicarboxylate transport transcriptional regulatory protein | sig. | 40 | 55 |
| | Pseudomonas putida KT2440 | PP_0263 | | C4-dicarboxylate transport transcriptional regulatory protein | strong | 40 | 55 |
| | Pseudomonas sp. RS175 | PFR28_04889 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | strong | 41 | 55 |
| | Pseudomonas sp. BP01 | JOY50_RS26420 | | sigma-54 dependent transcriptional regulator | insig. | 40 | 54 |
| | Escherichia fergusonii Becca | EFB2_04538 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 40 | 58 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS23460 | | sigma-54 dependent transcriptional regulator | cofit | 40 | 58 |
| | Marinobacter adhaerens HP15 | HP15_725 | | two component, sigma54 specific, transcriptional regulator, Fis family | strong | 39 | 59 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_17700 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 40 | 57 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_1860 | ycf29 | two component transcriptional regulator, LuxR family | no data | 30 | 99 |
| | Azospirillum sp. SherDot2 | MPMX19_04512 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 42 | 57 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS03980 | | Fis family transcriptional regulator | strong | 42 | 57 |
| | Variovorax sp. SCN45 | GFF1691 | | Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake | insig. | 42 | 55 |
| | Shewanella loihica PV-4 | Shew_1442 | | two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) | strong | 37 | 59 |
| | Rhizobium sp. OAE497 | ABIE40_RS26335 | | sigma-54 dependent transcriptional regulator | strong | 36 | 56 |
| | Variovorax sp. OAS795 | ABID97_RS26605 | | sigma-54 dependent transcriptional regulator | insig. | 41 | 56 |
| | Shewanella amazonensis SB2B | Sama_3243 | | response regulator receiver protein (RefSeq) | insig. | 29 | 76 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_0619 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | insig. | 43 | 52 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU0581 | | response regulator/anti-anti-sigma factor (TIGR) | cofit | 39 | 56 |
| | Azospirillum brasilense Sp245 | AZOBR_RS24025 | | transcriptional regulator | strong | 37 | 56 |
| | Azospirillum brasilense Sp245 | AZOBR_RS30385 | | Fis family transcriptional regulator | insig. | 40 | 57 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_4938 | | Helix-turn-helix, Fis-type | sig. | 38 | 57 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_4938 | | Helix-turn-helix, Fis-type | insig. | 38 | 57 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_00320 | | chemotaxis protein CheY | no data | 41 | 57 |
| | Pectobacterium carotovorum WPP14 | HER17_RS14245 | | response regulator transcription factor | insig. | 32 | 95 |
| | Pseudomonas sp. BP01 | JOY50_RS14825 | | sigma-54 dependent transcriptional regulator | insig. | 40 | 57 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4970 | | DNA-binding response regulator, LuxR family | insig. | 32 | 96 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS18660 | | transcriptional regulator | insig. | 36 | 95 |
| | Sphingobium sp. HT1-2 | GFF2850 | | response regulator receiver protein | cofit | 29 | 92 |
| | Pseudomonas protegens RBAN4 | FABNJH_10325 | rpoS | Regulator of RpoS | strong | 37 | 74 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU0258 | | sensory box histidine kinase/response regulator (TIGR) | strong | 36 | 58 |