Homologs of Rv0003 from Mycobacterium tuberculosis H37Rv

DNA replication and repair protein RecF (single-strand DNA binding protein)
SEED: DNA recombination and repair protein RecF
KEGG: DNA replication and repair protein RecF

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Mycobacterium tuberculosis H37Rv Rv0003 DNA replication and repair protein RecF (single-strand DNA binding protein) cofit 100 100
o Bifidobacterium breve UCC2003 BBR_RS10265 DNA replication and repair protein RecF strong 35 94
o Synechocystis sp000284455 PCC 6803 SGL_RS07025 DNA replication/repair protein RecF no data 33 94
o Synechococcus elongatus PCC 7942 Synpcc7942_2250 recF recombination protein F strong 32 94
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17475 DNA replication and repair protein RecF strong 28 92
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS24760 DNA replication and repair protein RecF strong 24 99
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS17135 DNA replication and repair protein RecF strong 26 96
o Fusobacterium nucleatum SB010 HUW76_00025 DNA replication/repair protein RecF no data 24 93
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS21650 DNA replication/repair protein RecF insig. 26 97
o Phocaeicola dorei CL03T12C01 ABI39_RS13135 DNA replication and repair protein RecF insig. 25 96
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS14620 DNA replication and repair protein RecF strong 27 95
o Bacteroides stercoris CC31F HMPREF1181_RS06185 DNA replication and repair protein RecF insig. 26 98
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1156 recF protein strong 27 96
o Cellulophaga baltica 18 M666_RS11055 DNA replication and repair protein RecF insig. 24 87
o Bacteroides thetaiotaomicron VPI-5482 BT4255 DNA replication and repair protein RecF, ABC family ATPase (NCBI ptt file) strong 26 98
o Bacteroides ovatus ATCC 8483 BACOVA_05088 DNA replication and repair protein RecF insig. 26 98
o Sinorhizobium meliloti 1021 SMc02863 recombination protein F cofit 32 88
o Erwinia amylovora T8 OLJFJH_05150 DNA replication/repair protein RecF insig. 29 98
o Rhizobium sp. OAE497 ABIE40_RS00200 DNA replication/repair protein RecF sig. 32 88
o Alteromonas macleodii MIT1002 MIT1002_00003 DNA replication and repair protein RecF insig. 27 90
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS00015 DNA replication/repair protein RecF insig. 29 96
o Rhodanobacter denitrificans MT42 LRK55_RS08240 DNA replication/repair protein RecF insig. 30 93
o Dickeya dadantii 3937 DDA3937_RS21285 DNA replication/repair protein RecF sig. 29 91
o Dickeya dianthicola 67-19 HGI48_RS00015 DNA replication/repair protein RecF insig. 29 91
o Dickeya dianthicola ME23 DZA65_RS00015 DNA replication/repair protein RecF insig. 29 91
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS08475 DNA replication/repair protein RecF sig. 30 93
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS15145 DNA replication/repair protein RecF strong 30 95
o Serratia liquefaciens MT49 IAI46_00015 DNA replication/repair protein RecF cofit 28 91
o Pectobacterium carotovorum WPP14 HER17_RS00015 DNA replication/repair protein RecF insig. 29 91
o Rahnella sp. WP5 EX31_RS05975 DNA replication/repair protein RecF insig. 29 91
o Escherichia coli BL21 ECD_03583 gap repair protein strong 28 91
o Escherichia fergusonii Becca EFB2_00003 DNA replication and repair protein RecF insig. 28 91
o Escherichia coli ECOR27 NOLOHH_07165 recF DNA replication/repair protein RecF cofit 28 91
o Escherichia coli ECRC100 OKFHMN_15025 recF DNA replication/repair protein RecF cofit 28 91
o Escherichia coli ECRC101 MCAODC_05535 recF DNA replication/repair protein RecF cofit 28 91
o Escherichia coli ECRC102 NIAGMN_12780 recF DNA replication/repair protein RecF sig. 28 91
o Escherichia coli ECRC62 BNILDI_04365 recF DNA replication/repair protein RecF cofit 28 91
o Escherichia coli ECRC98 JDDGAC_18645 recF DNA replication/repair protein RecF cofit 28 91
o Escherichia coli ECRC99 KEDOAH_13125 recF DNA replication/repair protein RecF no data 28 91
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00003 DNA replication and repair protein RecF insig. 28 91
o Escherichia coli Nissle 1917 ECOLIN_RS21310 DNA replication/repair protein RecF cofit 28 91
o Escherichia coli BW25113 b3700 recF recombination protein F (NCBI) strong 28 91
o Rhodospirillum rubrum S1H Rru_A0003 RecF protein (NCBI) no data 34 89
o Escherichia coli ECOR38 HEPCGN_13720 recF DNA replication/repair protein RecF cofit 28 91
o Pantoea sp. MT58 IAI47_00015 DNA replication/repair protein RecF insig. 28 97
o Bosea sp. OAE506 ABIE41_RS04170 DNA replication/repair protein RecF insig. 33 94
o Erwinia tracheiphila SCR3 LU632_RS00015 recF DNA replication/repair protein RecF sig. 28 98
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1756 DNA recombination and repair protein RecF cofit 27 91
o Agrobacterium fabrum C58 Atu0073 recF-like protein strong 31 88
o Vibrio cholerae E7946 ATCC 55056 CSW01_00065 DNA replication and repair protein RecF sig. 27 90
o Enterobacter sp. TBS_079 MPMX20_00003 DNA replication and repair protein RecF strong 27 91
o Klebsiella michiganensis M5al BWI76_RS00010 DNA replication and repair protein RecF sig. 27 91
o Azospirillum sp. SherDot2 MPMX19_02716 DNA replication and repair protein RecF no data 31 96
o Enterobacter asburiae PDN3 EX28DRAFT_3987 DNA replication and repair protein RecF cofit 27 91
o Rhodanobacter sp. FW510-T8 OKGIIK_15255 recF DNA replication/repair protein RecF insig. 29 86
o Shewanella loihica PV-4 Shew_0003 DNA replication and repair protein RecF (RefSeq) strong 25 90
o Pseudomonas sp. DMC3 GFF578 DNA replication and repair protein RecF insig. 28 89
o Magnetospirillum magneticum AMB-1 AMB_RS03285 DNA replication and repair protein RecF no data 31 88
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1927 DNA recombination and repair protein RecF strong 27 89
o Pseudomonas fluorescens FW300-N2E3 AO353_10480 recombinase RecF strong 28 89
o Acinetobacter radioresistens SK82 MPMX26_00003 DNA replication and repair protein RecF insig. 27 99
o Pseudomonas fluorescens GW456-L13 PfGW456L13_664 DNA recombination and repair protein RecF sig. 27 89
o Shewanella sp. ANA-3 Shewana3_0011 recF recombination protein F (RefSeq) strong 25 90
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4197 DNA recombination and repair protein RecF strong 27 89
o Shewanella amazonensis SB2B Sama_0015 recF recombination protein F (RefSeq) strong 26 95
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4.1 DNA recombination and repair protein RecF insig. 30 96
o Shewanella oneidensis MR-1 SO0010 recF DNA replication and repair protein RecF (NCBI ptt file) strong 25 90
o Pseudomonas fluorescens FW300-N2C3 AO356_11635 recombinase RecF strong 27 89
o Pseudomonas sp. RS175 PFR28_04593 DNA replication and repair protein RecF insig. 27 89
o Lysobacter sp. OAE881 ABIE51_RS00765 DNA replication/repair protein RecF insig. 30 96
o Pseudomonas simiae WCS417 PS417_00015 recombinase RecF strong 27 91
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS15360 DNA replication/repair protein RecF insig. 31 88
o Pseudomonas fluorescens SBW25 PFLU_RS00015 DNA replication/repair protein RecF insig. 27 89
o Pseudomonas fluorescens SBW25-INTG PFLU_RS00015 DNA replication/repair protein RecF sig. 27 89
o Pseudomonas sp. SVBP6 COO64_RS02120 recF DNA replication/repair protein RecF insig. 27 89
o Pseudomonas sp. S08-1 OH686_12620 DNA recombination and repair protein RecF insig. 28 90
o Phaeobacter inhibens DSM 17395 PGA1_c00030 DNA replication and repair protein RecF strong 32 87
o Caulobacter crescentus NA1000 CCNA_00158 DNA replication and repair protein recF strong 34 87
o Caulobacter crescentus NA1000 Δfur CCNA_00158 DNA replication and repair protein recF cofit 34 87
o Pseudomonas syringae pv. syringae B728a Psyr_0003 DNA replication and repair protein RecF strong 26 91
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0003 DNA replication and repair protein RecF strong 26 91
o Marinobacter adhaerens HP15 HP15_3705 DNA replication and repair protein recF sig. 24 85
o Sphingomonas koreensis DSMZ 15582 Ga0059261_2727 DNA replication and repair protein RecF no data 33 86
o Xanthobacter sp. DMC5 GFF3876 DNA replication and repair protein RecF insig. 29 91
o Kangiella aquimarina DSM 16071 B158DRAFT_0366 DNA replication and repair protein RecF strong 23 94
o Pseudomonas aeruginosa PA14 IKLFDK_25545 DNA replication/repair protein RecF cofit 27 90
o Pseudomonas putida KT2440 PP_0012 DNA replication and repair protein sig. 26 89
o Pseudomonas sp. BP01 JOY50_RS08340 recF DNA replication/repair protein RecF insig. 26 91
o Rhodopseudomonas palustris CGA009 TX73_000015 DNA replication/repair protein RecF insig. 30 91
o Azospirillum brasilense Sp245 AZOBR_RS17670 recombinase RecF insig. 30 96
  Variovorax sp. SCN45 GFF7580 DNA recombination and repair protein RecF no data 30 57
o Pseudomonas stutzeri RCH2 Psest_0004 recF protein strong 26 93
o Dinoroseobacter shibae DFL-12 Dshi_3375 SMC domain protein (RefSeq) strong 29 88
  Paraburkholderia sabiae LMG 24235 QEN71_RS26535 DNA repair protein RecN insig. 46 18
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2313 condensin subunit Smc insig. 29 37
  Bifidobacterium breve UCC2003 BBR_RS16840 chromosome segregation protein SMC insig. 46 12
  Azospirillum brasilense Sp245 AZOBR_RS20260 chromosome segregation ATPase sig. 29 36
  Mycobacterium tuberculosis H37Rv Rv2922c Probable chromosome partition protein Smc sig. 43 14
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3431.1 DNA repair protein RecN insig. 37 18
  Cupriavidus basilensis FW507-4G11 RR42_RS05910 DNA repair protein strong 43 18