Homologs of RR42_RS20055 from Cupriavidus basilensis FW507-4G11

ATP-dependent DNA helicase Rep
SEED: ATP-dependent DNA helicase Rep
KEGG: ATP-dependent DNA helicase Rep

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Cupriavidus basilensis FW507-4G11 RR42_RS20055 ATP-dependent DNA helicase Rep strong 100 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS03915 UvrD-helicase domain-containing protein cofit 85 99
o Ralstonia solanacearum GMI1000 RS_RS16480 ATP-dependent DNA helicase Rep sig. 84 99
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS08635 ATP-dependent DNA helicase Rep insig. 84 99
o Ralstonia solanacearum UW163 UW163_RS04975 ATP-dependent DNA helicase Rep insig. 84 99
o Ralstonia solanacearum PSI07 RPSI07_RS08600 ATP-dependent DNA helicase Rep strong 84 99
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02416 ATP-dependent DNA helicase Rep no data 78 99
o Burkholderia phytofirmans PsJN BPHYT_RS19305 ATP-dependent DNA helicase Rep strong 78 99
o Paraburkholderia sabiae LMG 24235 QEN71_RS29185 UvrD-helicase domain-containing protein strong 78 98
o Paraburkholderia graminis OAS925 ABIE53_000233 ATP-dependent DNA helicase Rep no data 77 99
o Herbaspirillum seropedicae SmR1 HSERO_RS21590 ATP-dependent DNA helicase Rep strong 65 100
o Dechlorosoma suillum PS Dsui_0933 DNA/RNA helicase, superfamily I no data 58 98
o Castellaniella sp019104865 MT123 ABCV34_RS11065 UvrD-helicase domain-containing protein sig. 51 99
o Variovorax sp. SCN45 GFF5842 ATP-dependent DNA helicase Rep no data 52 98
o Variovorax sp. OAS795 ABID97_RS05510 UvrD-helicase domain-containing protein no data 52 98
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1778 ATP-dependent DNA helicase Rep cofit 52 98
o Dickeya dadantii 3937 DDA3937_RS20105 DNA helicase Rep no data 47 98
o Pectobacterium carotovorum WPP14 HER17_RS01120 DNA helicase Rep no data 47 98
o Acidovorax sp. GW101-3H11 Ac3H11_866 ATP-dependent DNA helicase Rep no data 49 93
o Vibrio cholerae E7946 ATCC 55056 CSW01_00865 DNA helicase Rep no data 48 98
o Dickeya dianthicola ME23 DZA65_RS21290 DNA helicase Rep no data 47 98
o Dickeya dianthicola 67-19 HGI48_RS20245 DNA helicase Rep no data 47 98
o Serratia liquefaciens MT49 IAI46_00565 DNA helicase Rep no data 47 97
o Shewanella loihica PV-4 Shew_0305 ATP-dependent DNA helicase Rep (RefSeq) no data 48 94
o Pantoea sp. MT58 IAI47_18545 DNA helicase Rep no data 46 98
o Erwinia tracheiphila SCR3 LU632_RS24280 rep DNA helicase Rep no data 46 98
o Shewanella sp. ANA-3 Shewana3_0374 ATP-dependent DNA helicase Rep (RefSeq) no data 47 94
o Shewanella oneidensis MR-1 SO4325 rep ATP-dependent DNA helicase Rep (NCBI ptt file) no data 47 94
o Escherichia coli ECRC101 OKFHMN_14610 rep DNA helicase Rep no data 46 98
o Escherichia coli ECRC101 MCAODC_05115 rep DNA helicase Rep no data 46 98
o Escherichia coli ECRC102 NIAGMN_12365 rep DNA helicase Rep no data 46 98
o Escherichia coli ECRC98 JDDGAC_18230 rep DNA helicase Rep no data 46 98
o Escherichia coli ECRC99 KEDOAH_13540 rep DNA helicase Rep no data 46 98
o Rahnella sp. WP5 EX31_RS15030 DNA helicase Rep no data 46 97
o Escherichia coli BL21 ECD_03656 DNA helicase and single-stranded DNA-dependent ATPase no data 47 98
o Escherichia coli ECOR27 NOLOHH_06745 rep DNA helicase Rep no data 47 98
o Escherichia coli ECOR38 HEPCGN_13320 rep DNA helicase Rep cofit 47 98
o Escherichia coli ECRC62 BNILDI_04780 rep DNA helicase Rep insig. 47 98
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04276 ATP-dependent DNA helicase Rep strong 47 98
o Escherichia coli BW25113 b3778 rep DNA helicase and single-stranded DNA-dependent ATPase (NCBI) strong 47 98
o Escherichia coli Nissle 1917 ECOLIN_RS21690 DNA helicase Rep cofit 46 98
o Escherichia fergusonii Becca EFB2_04860 ATP-dependent DNA helicase Rep no data 46 98
o Marinobacter adhaerens HP15 HP15_214 DNA helicase, ATP-dependent, RepA type no data 46 98
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2894 ATP-dependent DNA helicase Rep no data 46 98
o Enterobacter asburiae PDN3 EX28DRAFT_4449 ATP-dependent DNA helicase Rep (EC 3.6.1.-) no data 46 99
o Enterobacter sp. TBS_079 MPMX20_04494 ATP-dependent DNA helicase Rep no data 46 99
o Shewanella amazonensis SB2B Sama_3266 ATP-dependent DNA helicase Rep (RefSeq) no data 47 94
o Alteromonas macleodii MIT1002 MIT1002_00071 ATP-dependent DNA helicase rep no data 45 98
o Klebsiella michiganensis M5al BWI76_RS01020 DNA helicase Rep no data 46 98
o Kangiella aquimarina DSM 16071 B158DRAFT_0352 ATP-dependent DNA helicase Rep (EC 3.6.1.-) strong 45 94
o Pseudomonas syringae pv. syringae B728a Psyr_0075 ATP-dependent DNA helicase Rep no data 45 98
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0075 ATP-dependent DNA helicase Rep no data 45 98
o Acinetobacter radioresistens SK82 MPMX26_02416 ATP-dependent DNA helicase Rep no data 44 98
o Pseudomonas putida KT2440 PP_5264 helicase a single-stranded DNA dependent ATPase no data 44 98
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2151 ATP-dependent DNA helicase Rep no data 45 98
o Pseudomonas simiae WCS417 PS417_27670 ATP-dependent DNA helicase Rep no data 44 98
o Pseudomonas fluorescens GW456-L13 PfGW456L13_819 ATP-dependent DNA helicase Rep no data 44 98
o Pseudomonas fluorescens SBW25 PFLU_RS29345 DNA helicase Rep no data 44 98
o Pseudomonas fluorescens SBW25-INTG PFLU_RS29345 DNA helicase Rep no data 44 98
o Pseudomonas fluorescens FW300-N2E3 AO353_09120 ATP-dependent DNA helicase Rep no data 44 98
o Pseudomonas stutzeri RCH2 Psest_3778 ATP-dependent DNA helicase Rep no data 44 98
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4398 ATP-dependent DNA helicase Rep no data 44 98
o Pseudomonas fluorescens FW300-N2C3 AO356_12655 ATP-dependent DNA helicase Rep no data 44 98
o Pseudomonas sp. RS175 PFR28_04392 ATP-dependent DNA helicase Rep no data 44 98
o Pseudomonas sp. S08-1 OH686_13715 ATP-dependent DNA helicase Rep no data 43 97
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS16790 UvrD-helicase domain-containing protein no data 44 98
o Rhodanobacter sp. FW510-T8 OKGIIK_13085 rep ATP-dependent DNA helicase Rep no data 45 94
o Rhodanobacter denitrificans MT42 LRK55_RS10435 UvrD-helicase domain-containing protein no data 45 94
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS10795 UvrD-helicase domain-containing protein no data 45 94
o Lysobacter sp. OAE881 ABIE51_RS00370 UvrD-helicase domain-containing protein no data 43 95
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.5266.1 ATP-dependent DNA helicase Rep no data 41 95
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0292 Superfamily I DNA and RNA helicases no data 38 94
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07840 ATP-dependent helicase no data 35 100
  Bifidobacterium breve UCC2003 BBR_RS14985 ATP-dependent DNA helicase PcrA strong 38 94
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS16965 DNA helicase II strong 41 94
  Shewanella amazonensis SB2B Sama_0419 uvrD DNA-dependent helicase II (RefSeq) strong 37 96
  Caulobacter crescentus NA1000 CCNA_01596 DNA helicase II strong 38 95
  Caulobacter crescentus NA1000 Δfur CCNA_01596 DNA helicase II cofit 38 95
  Rhodanobacter denitrificans MT42 LRK55_RS06595 DNA helicase II no data 39 94
  Rhizobium sp. OAE497 ABIE40_RS11670 UvrD-helicase domain-containing protein sig. 38 94
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS06850 DNA helicase II sig. 39 94
  Rhodanobacter sp. FW510-T8 OKGIIK_16775 DNA helicase insig. 40 94
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04960 UvrD-helicase domain-containing protein insig. 37 94
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12980 ATP-dependent DNA helicase no data 37 94
  Phaeobacter inhibens DSM 17395 PGA1_c09450 DNA helicase II UvrD strong 37 95
  Agrobacterium fabrum C58 Atu2057 DNA helicase II sig. 36 94
  Pseudomonas fluorescens SBW25 PFLU_RS29900 DNA helicase II cofit 39 93
  Pseudomonas fluorescens SBW25-INTG PFLU_RS29900 DNA helicase II strong 39 93
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4273 ATP-dependent DNA helicase UvrD/PcrA strong 38 93
  Kangiella aquimarina DSM 16071 B158DRAFT_0238 Superfamily I DNA and RNA helicases strong 36 96
  Bacteroides thetaiotaomicron VPI-5482 BT0657 ATP-dependent DNA helicase (NCBI ptt file) no data 36 94
  Azospirillum brasilense Sp245 AZOBR_RS12445 DNA helicase II insig. 37 94
  Shewanella oneidensis MR-1 SO0467 uvrD DNA helicase II (NCBI ptt file) strong 36 96
  Shewanella loihica PV-4 Shew_3385 uvrD DNA-dependent helicase II (RefSeq) strong 36 96
  Pseudomonas fluorescens FW300-N2C3 AO356_11990 DNA helicase II strong 38 93
  Pseudomonas fluorescens FW300-N2E3 AO353_10055 DNA helicase II strong 38 93
  Shewanella sp. ANA-3 Shewana3_0469 uvrD DNA-dependent helicase II (RefSeq) strong 36 100
  Bacteroides ovatus ATCC 8483 BACOVA_02365 UvrD/REP helicase no data 36 94
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_07795 ATP-dependent DNA helicase no data 36 94
  Phocaeicola dorei CL03T12C01 ABI39_RS17735 UvrD-helicase domain-containing protein no data 36 94