Homologs of QEN71_RS04400 from Paraburkholderia sabiae LMG 24235

ATP-dependent helicase
SEED: ATP-dependent DNA helicase UvrD/PcrA, proteobacterial paralog
KEGG: DNA helicase II / ATP-dependent DNA helicase PcrA

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Paraburkholderia sabiae LMG 24235 QEN71_RS04400 ATP-dependent helicase insig. 100 100
o Burkholderia phytofirmans PsJN BPHYT_RS14580 ATP-dependent DNA helicase insig. 87 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04321 DNA helicase-2 / ATP-dependent DNA helicase PcrA insig. 86 100
o Paraburkholderia graminis OAS925 ABIE53_003077 DNA helicase-2/ATP-dependent DNA helicase PcrA insig. 85 100
o Rhizobium sp. OAE497 ABIE40_RS02665 ATP-dependent helicase insig. 66 96
o Sinorhizobium meliloti 1021 SMa2321 UvrD2 DNA helicase insig. 64 96
o Agrobacterium fabrum C58 Atu4619 ATP-dependent DNA helicase insig. 62 96
o Rhodopseudomonas palustris CGA009 TX73_014510 ATP-dependent helicase insig. 65 96
o Bosea sp. OAE506 ABIE41_RS01165 ATP-dependent helicase insig. 65 96
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS17700 ATP-dependent helicase insig. 62 96
o Ralstonia solanacearum UW163 UW163_RS21450 ATP-dependent helicase insig. 62 96
o Cupriavidus basilensis FW507-4G11 RR42_RS01715 ATP-dependent DNA helicase insig. 65 98
o Ralstonia solanacearum PSI07 RPSI07_RS05880 ATP-dependent helicase insig. 62 96
o Ralstonia solanacearum GMI1000 RS_RS23300 ATP-dependent helicase insig. 60 99
o Ralstonia sp. UNC404CL21Col ABZR87_RS18640 ATP-dependent helicase insig. 61 98
o Variovorax sp. OAS795 ABID97_RS04485 ATP-dependent helicase insig. 61 93
o Variovorax sp. SCN45 GFF7292 ATP-dependent DNA helicase UvrD/PcrA, proteobacterial paralog insig. 60 93
o Herbaspirillum seropedicae SmR1 HSERO_RS13955 ATP-dependent DNA helicase insig. 60 92
o Desulfovibrio vulgaris Hildenborough JW710 DVU0156 pcrA ATP-dependent DNA helicase, UvrD/REP family (TIGR) insig. 37 87
  Desulfovibrio vulgaris Miyazaki F DvMF_1967 UvrD/REP helicase (RefSeq) strong 34 87
  Phocaeicola dorei CL03T12C01 ABI39_RS17735 UvrD-helicase domain-containing protein no data 33 91
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4273 ATP-dependent DNA helicase UvrD/PcrA strong 35 85
  Pseudomonas fluorescens FW300-N2C3 AO356_11990 DNA helicase II strong 35 85
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS03305 UvrD-helicase domain-containing protein strong 32 91
  Pseudomonas fluorescens FW300-N2E3 AO353_10055 DNA helicase II strong 35 85
  Pseudomonas fluorescens GW456-L13 PfGW456L13_724 ATP-dependent DNA helicase UvrD/PcrA sig. 34 86
  Pseudomonas fluorescens SBW25 PFLU_RS29900 DNA helicase II cofit 34 85
  Pseudomonas fluorescens SBW25-INTG PFLU_RS29900 DNA helicase II strong 34 85
  Pseudomonas sp. RS175 PFR28_04523 DNA helicase II sig. 35 85
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2005 ATP-dependent DNA helicase UvrD/PcrA insig. 35 85
  Shewanella sp. ANA-3 Shewana3_0469 uvrD DNA-dependent helicase II (RefSeq) strong 32 94
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0292 Superfamily I DNA and RNA helicases no data 33 86
  Shewanella oneidensis MR-1 SO0467 uvrD DNA helicase II (NCBI ptt file) strong 32 94
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS03560 3'-5' exonuclease insig. 31 88
  Pseudomonas sp. S08-1 OH686_13045 ATP-dependent DNA helicase UvrD/PcrA insig. 34 90
  Bacteroides stercoris CC31F HMPREF1181_RS16505 UvrD-helicase domain-containing protein insig. 31 88
  Bacteroides ovatus ATCC 8483 BACOVA_02365 UvrD/REP helicase no data 31 91
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07840 ATP-dependent helicase no data 31 86
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12980 ATP-dependent DNA helicase no data 29 90
  Pseudomonas syringae pv. syringae B728a Psyr_5065 ATP-dependent DNA helicase UvrD strong 32 89
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_5065 ATP-dependent DNA helicase UvrD strong 32 89
  Bacteroides thetaiotaomicron VPI-5482 BT0657 ATP-dependent DNA helicase (NCBI ptt file) no data 31 88
  Pectobacterium carotovorum WPP14 HER17_RS01360 DNA helicase II cofit 32 89
  Pseudomonas putida KT2440 PP_5352 DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex strong 33 85
  Shewanella amazonensis SB2B Sama_0419 uvrD DNA-dependent helicase II (RefSeq) strong 31 95
  Dickeya dianthicola ME23 DZA65_RS21080 DNA helicase II sig. 32 89
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS16965 DNA helicase II strong 33 90
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_07795 ATP-dependent DNA helicase no data 29 90
  Paraburkholderia sabiae LMG 24235 QEN71_RS05110 3'-5' exonuclease no data 31 90
  Dickeya dadantii 3937 DDA3937_RS19880 DNA helicase II strong 32 89
  Erwinia tracheiphila SCR3 LU632_RS24125 uvrD DNA helicase II no data 31 89
  Burkholderia phytofirmans PsJN BPHYT_RS13840 DNA-dependent helicase no data 31 90
o Acinetobacter radioresistens SK82 MPMX26_00369 ATP-dependent DNA helicase PcrA insig. 33 83
  Dickeya dianthicola 67-19 HGI48_RS20035 DNA helicase II sig. 32 89
  Escherichia coli ECOR27 NOLOHH_06540 uvrD DNA helicase II cofit 32 88
  Escherichia coli ECRC62 BNILDI_04995 uvrD DNA helicase II insig. 32 88
  Escherichia coli BW25113 b3813 uvrD DNA-dependent ATPase I and helicase II (NCBI) strong 32 88
  Escherichia coli BL21 ECD_03689 DNA-dependent ATPase I and helicase II no data 32 88
  Escherichia fergusonii Becca EFB2_04824 DNA helicase II strong 32 88
  Escherichia coli ECOR38 HEPCGN_13115 uvrD DNA helicase II cofit 32 88
  Escherichia coli ECRC101 OKFHMN_14410 uvrD DNA helicase II sig. 32 88
  Escherichia coli ECRC101 MCAODC_04915 uvrD DNA helicase II sig. 32 88
  Escherichia coli ECRC102 NIAGMN_12165 uvrD DNA helicase II strong 32 88
  Escherichia coli ECRC98 JDDGAC_18035 uvrD DNA helicase II no data 32 88
  Escherichia coli ECRC99 KEDOAH_13740 uvrD DNA helicase II no data 32 88
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04237 DNA helicase II sig. 32 88
  Escherichia coli Nissle 1917 ECOLIN_RS21885 DNA helicase II cofit 32 88
  Alteromonas macleodii MIT1002 MIT1002_00153 DNA helicase II sig. 32 88
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04469 ATP-dependent DNA helicase UvrD no data 31 90
  Shewanella loihica PV-4 Shew_3385 uvrD DNA-dependent helicase II (RefSeq) strong 30 94
  Pseudomonas stutzeri RCH2 Psest_4098 Superfamily I DNA and RNA helicases strong 33 89
  Marinobacter adhaerens HP15 HP15_3403 UvrD/REP helicase strong 33 85
  Klebsiella michiganensis M5al BWI76_RS01220 DNA-dependent helicase II strong 32 88
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF241 ATP-dependent DNA helicase UvrD/PcrA strong 31 88
  Serratia liquefaciens MT49 IAI46_00735 DNA helicase II strong 33 89
  Variovorax sp. OAS795 ABID97_RS09150 UvrD-helicase domain-containing protein sig. 31 90
  Mycobacterium tuberculosis H37Rv Rv0949 Probable ATP-dependent DNA helicase II UvrD1 insig. 32 97
  Paraburkholderia graminis OAS925 ABIE53_002936 DNA helicase-2/ATP-dependent DNA helicase PcrA no data 31 90
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5598 ATP-dependent DNA helicase UvrD/PcrA no data 30 93
  Vibrio cholerae E7946 ATCC 55056 CSW01_01015 DNA helicase II strong 30 93
  Rhodanobacter denitrificans MT42 LRK55_RS06595 DNA helicase II no data 32 87
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS06850 DNA helicase II sig. 32 87
  Variovorax sp. SCN45 GFF4000 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) cofit 31 91
  Ralstonia solanacearum PSI07 RPSI07_RS13455 DNA-dependent helicase no data 31 90
  Kangiella aquimarina DSM 16071 B158DRAFT_0238 Superfamily I DNA and RNA helicases strong 31 91
  Ralstonia solanacearum GMI1000 RS_RS11220 DNA-dependent helicase insig. 31 90
  Enterobacter sp. TBS_079 MPMX20_04463 DNA helicase II strong 31 88
  Fusobacterium nucleatum SB010 HUW76_07175 UvrD-helicase domain-containing protein strong 28 91
  Lysobacter sp. OAE881 ABIE51_RS01985 DNA helicase II strong 32 93
  Enterobacter asburiae PDN3 EX28DRAFT_4482 ATP-dependent DNA helicase UvrD (EC 3.6.1.-) insig. 31 88
  Ralstonia sp. UNC404CL21Col ABZR87_RS15705 UvrD-helicase domain-containing protein sig. 31 90
  Caulobacter crescentus NA1000 CCNA_01596 DNA helicase II strong 32 92
  Caulobacter crescentus NA1000 Δfur CCNA_01596 DNA helicase II cofit 32 92
  Rahnella sp. WP5 EX31_RS15175 DNA helicase II insig. 32 89
  Rhodanobacter sp. FW510-T8 OKGIIK_16775 DNA helicase insig. 32 87
  Acidovorax sp. GW101-3H11 Ac3H11_1660 ATP-dependent DNA helicase UvrD/PcrA insig. 31 85
  Pantoea sp. MT58 IAI47_18390 DNA helicase II insig. 31 89
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS03775 DNA-dependent helicase no data 31 90
  Ralstonia solanacearum UW163 UW163_RS09895 DNA-dependent helicase no data 31 90
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0249 Superfamily I DNA and RNA helicases strong 31 90