Homologs of Psyr_4182 from Pseudomonas syringae pv. syringae B728a

Protein of unknown function DUF150
SEED: FIG000325: clustered with transcription termination protein NusA
KEGG: ribosome maturation factor RimP

98 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas syringae pv. syringae B728a Psyr_4182 Protein of unknown function DUF150 no data 100 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4182 Protein of unknown function DUF150 no data 100 100
o Pseudomonas sp. RS175 PFR28_00088 Ribosome maturation factor RimP no data 92 100
o Pseudomonas fluorescens SBW25 PFLU_RS25820 ribosome maturation factor RimP no data 92 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS25820 ribosome maturation factor RimP no data 92 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3355 FIG000325: clustered with transcription termination protein NusA no data 91 96
o Pseudomonas fluorescens FW300-N2C3 AO356_07420 ribosome maturation protein RimP no data 91 96
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1163 FIG000325: clustered with transcription termination protein NusA no data 91 96
o Pseudomonas fluorescens GW456-L13 PfGW456L13_5090 FIG000325: clustered with transcription termination protein NusA no data 91 96
o Pseudomonas fluorescens FW300-N2E3 AO353_05570 ribosome maturation protein RimP no data 91 96
o Pseudomonas sp. S08-1 OH686_17135 Bacterial ribosome SSU maturation protein RimP no data 78 100
o Pseudomonas simiae WCS417 PS417_23980 ribosome maturation protein RimP no data 91 96
o Pseudomonas putida KT2440 PP_4714 ribosome maturation factor no data 87 100
o Pseudomonas stutzeri RCH2 Psest_0979 Uncharacterized protein conserved in bacteria no data 81 96
o Marinobacter adhaerens HP15 HP15_3069 protein belonging to uncharacterized protein family UPF0090 no data 65 96
o Shewanella loihica PV-4 Shew_2829 hypothetical protein (RefSeq) no data 58 94
o Shewanella oneidensis MR-1 SO1202 conserved hypothetical protein (NCBI ptt file) no data 55 92
o Shewanella amazonensis SB2B Sama_0959 hypothetical protein (RefSeq) no data 54 92
o Shewanella sp. ANA-3 Shewana3_1028 hypothetical protein (RefSeq) no data 54 92
o Alteromonas macleodii MIT1002 MIT1002_01769 Ribosome maturation factor RimP no data 52 93
o Kangiella aquimarina DSM 16071 B158DRAFT_0112 Uncharacterized protein conserved in bacteria strong 50 91
o Dickeya dadantii 3937 DDA3937_RS03060 ribosome maturation factor RimP no data 51 94
o Dickeya dianthicola 67-19 HGI48_RS03230 ribosome maturation factor RimP no data 49 94
o Dickeya dianthicola ME23 DZA65_RS03225 ribosome maturation factor RimP no data 49 94
o Escherichia coli BL21 ECD_03037 ribosome maturation factor for 30S subunits strong 49 94
o Escherichia fergusonii Becca EFB2_00653 Ribosome maturation factor RimP no data 49 94
  Escherichia coli Nissle 1917 ECOLIN_RS18205 ribosome maturation factor RimP no data 49 94
  Escherichia coli Nissle 1917 ECOLIN_RS18225 ribosome maturation factor RimP no data 49 94
  Escherichia coli Nissle 1917 ECOLIN_RS18245 ribosome maturation factor RimP no data 49 94
o Escherichia coli Nissle 1917 ECOLIN_RS18265 ribosome maturation factor RimP no data 49 94
o Escherichia coli BW25113 b3170 rimP conserved protein (RefSeq) no data 49 94
o Escherichia coli ECOR27 NOLOHH_09900 rimP ribosome maturation factor RimP no data 49 94
o Escherichia coli ECOR38 HEPCGN_16975 rimP ribosome maturation factor RimP no data 49 94
o Escherichia coli ECRC101 OKFHMN_18100 rimP ribosome maturation factor RimP no data 49 94
o Escherichia coli ECRC101 MCAODC_08620 rimP ribosome maturation factor RimP no data 49 94
o Escherichia coli ECRC102 NIAGMN_15860 rimP ribosome maturation factor RimP no data 49 94
o Escherichia coli ECRC62 BNILDI_01635 rimP ribosome maturation factor RimP no data 49 94
o Escherichia coli ECRC98 JDDGAC_21725 rimP ribosome maturation factor RimP no data 49 94
o Escherichia coli ECRC99 KEDOAH_10050 rimP ribosome maturation factor RimP no data 49 94
o Enterobacter asburiae PDN3 EX28DRAFT_3221 Uncharacterized protein conserved in bacteria no data 48 94
o Enterobacter sp. TBS_079 MPMX20_04075 Ribosome maturation factor RimP no data 48 94
o Vibrio cholerae E7946 ATCC 55056 CSW01_03380 ribosome maturation factor RimP no data 48 92
o Erwinia tracheiphila SCR3 LU632_RS21070 rimP ribosome maturation factor RimP no data 49 94
o Pantoea sp. MT58 IAI47_17035 ribosome maturation factor RimP sig. 48 94
o Klebsiella michiganensis M5al BWI76_RS25100 ribosome maturation factor no data 47 94
o Pectobacterium carotovorum WPP14 HER17_RS18220 ribosome maturation factor RimP no data 47 94
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1496 FIG000325: clustered with transcription termination protein NusA no data 50 89
o Rahnella sp. WP5 EX31_RS08550 ribosome maturation factor RimP no data 46 94
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00530 Ribosome maturation factor RimP no data 50 89
o Serratia liquefaciens MT49 IAI46_01925 ribosome maturation factor RimP no data 46 94
o Lysobacter sp. OAE881 ABIE51_RS08385 ribosome maturation factor RimP no data 42 96
o Acinetobacter radioresistens SK82 MPMX26_00252 Ribosome maturation factor RimP strong 43 95
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS06035 ribosome maturation factor RimP no data 43 87
o Rhodanobacter sp. FW510-T8 OKGIIK_05840 rimP ribosome maturation protein RimP no data 42 87
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2000.1 FIG000325: clustered with transcription termination protein NusA no data 43 96
o Rhodanobacter denitrificans MT42 LRK55_RS00830 ribosome maturation factor RimP no data 39 92
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS01055 ribosome maturation factor RimP no data 39 92
o Dinoroseobacter shibae DFL-12 Dshi_3560 protein of unknown function DUF150 (RefSeq) no data 38 100
o Desulfovibrio vulgaris Hildenborough JW710 DVU0511 conserved hypothetical protein (TIGR) insig. 41 91
o Azospirillum brasilense Sp245 AZOBR_RS01420 ribosome maturation factor RimP no data 38 96
o Magnetospirillum magneticum AMB-1 AMB_RS20595 ribosome maturation factor cofit 41 91
  Rhodopseudomonas palustris CGA009 TX73_002280 ribosome maturation factor RimP sig. 43 85
  Phaeobacter inhibens DSM 17395 PGA1_c34650 UPF0090 protein YhbC strong 40 92
o Azospirillum sp. SherDot2 MPMX19_02519 Ribosome maturation factor RimP no data 40 84
o Dechlorosoma suillum PS Dsui_2724 hypothetical protein no data 40 92
o Burkholderia phytofirmans PsJN BPHYT_RS08060 ribosome maturation factor RimP strong 38 92
o Paraburkholderia sabiae LMG 24235 QEN71_RS23110 ribosome maturation factor RimP sig. 37 92
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05102 ribosome maturation factor RimP sig. 37 92
  Caulobacter crescentus NA1000 CCNA_00044 ribosome maturation protein RimP strong 42 78
  Caulobacter crescentus NA1000 Δfur CCNA_00044 ribosome maturation protein RimP cofit 42 78
o Paraburkholderia graminis OAS925 ABIE53_001828 ribosome maturation factor RimP sig. 36 92
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS15670 ribosome maturation factor RimP no data 35 92
o Ralstonia solanacearum UW163 UW163_RS13130 ribosome maturation factor RimP no data 35 92
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS13990 ribosome maturation factor RimP no data 35 91
o Ralstonia solanacearum PSI07 RPSI07_RS17685 ribosome maturation factor RimP no data 35 92
o Ralstonia solanacearum GMI1000 RS_RS06450 ribosome maturation factor no data 35 92
  Rhodospirillum rubrum S1H Rru_A3778 Protein of unknown function DUF150 (NCBI) no data 37 78
  Bosea sp. OAE506 ABIE41_RS04540 ribosome maturation factor RimP no data 34 87
o Cupriavidus basilensis FW507-4G11 RR42_RS12855 ribosome maturation protein RimP no data 35 92
o Ralstonia sp. UNC404CL21Col ABZR87_RS11200 ribosome maturation factor RimP no data 34 92
  Agrobacterium fabrum C58 Atu0090 hypothetical protein no data 32 93
  Sinorhizobium meliloti 1021 SMc02911 hypothetical protein no data 37 74
  Desulfovibrio vulgaris Miyazaki F DvMF_2516 protein of unknown function DUF150 (RefSeq) sig. 36 71
o Fusobacterium nucleatum SB010 HUW76_01020 ribosome maturation factor RimP strong 26 94
  Rhizobium sp. OAE497 ABIE40_RS00320 ribosome maturation factor RimP no data 34 93
  Castellaniella sp019104865 MT123 ABCV34_RS02115 ribosome maturation factor RimP no data 37 74
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2150 Uncharacterized protein conserved in bacteria no data 34 80
o Herbaspirillum seropedicae SmR1 HSERO_RS18005 ribosome maturation protein RimP no data 28 92
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0707 Uncharacterized protein conserved in bacteria no data 32 68
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS22730 ribosome assembly cofactor RimP no data 34 61
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS03080 ribosome assembly cofactor RimP no data 32 72
  Variovorax sp. OAS795 ABID97_RS16495 ribosome maturation factor RimP no data 31 75
  Variovorax sp. SCN45 GFF224 Bacterial ribosome SSU maturation protein RimP no data 32 70
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_14455 ribosome maturation factor strong 38 44
  Synechococcus elongatus PCC 7942 Synpcc7942_2023 hypothetical protein strong 30 76
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4341 FIG000325: clustered with transcription termination protein NusA strong 31 70
  Acidovorax sp. GW101-3H11 Ac3H11_2869 FIG000325: clustered with transcription termination protein NusA no data 31 64
  Mycobacterium tuberculosis H37Rv Rv2842c Conserved protein no data 31 62