Homologs of Psyr_3250 from Pseudomonas syringae pv. syringae B728a

Helix-turn-helix motif protein
SEED: Transcriptional regulator, Cro/CI family

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas syringae pv. syringae B728a Psyr_3250 Helix-turn-helix motif protein insig. 100 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3250 Helix-turn-helix motif protein insig. 100 100
o Pseudomonas fluorescens FW300-N2C3 AO356_23290 Cro/Cl family transcriptional regulator sig. 75 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_03682 HTH-type transcriptional regulator SutR cofit 74 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5820 Transcriptional regulator, Cro/CI family strong 73 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_541 Transcriptional regulator, Cro/CI family insig. 74 100
o Pseudomonas orientalis W4I3 QF045_RS18555 XRE family transcriptional regulator cofit 74 100
o Pseudomonas simiae WCS417 PS417_16820 Cro/Cl family transcriptional regulator no data 72 100
o Pseudomonas fluorescens FW300-N2E3 AO353_21480 Cro/Cl family transcriptional regulator strong 74 100
o Pseudomonas sp. RS175 PFR28_02400 hypothetical protein sig. 72 100
o Pseudomonas fluorescens SBW25 PFLU_RS18830 helix-turn-helix domain-containing protein insig. 72 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS18830 helix-turn-helix domain-containing protein strong 72 100
o Pseudomonas sp. SVBP6 COO64_RS19420 helix-turn-helix domain-containing protein insig. 65 100
o Pseudomonas sp. BP01 JOY50_RS12560 helix-turn-helix domain-containing protein insig. 66 100
o Pseudomonas putida KT2440 PP_2232 XRE family transcriptional regulator sig. 65 95
  Pseudomonas sp. DMC3 GFF1740 hypothetical protein cofit 72 78
o Pseudomonas aeruginosa MRSN321 DY961_RS19145 XRE family transcriptional regulator strong 58 97
o Pseudomonas aeruginosa PA14 IKLFDK_06470 Cro/Cl family transcriptional regulator strong 58 97
o Pseudomonas aeruginosa PUPa3 DQ20_RS53270 XRE family transcriptional regulator strong 58 97
o Sphingobium sp. HT1-2 GFF1865 Transcriptional regulator, Xre family cofit 53 96
o Serratia liquefaciens MT49 IAI46_09015 helix-turn-helix transcriptional regulator no data 52 96
o Acinetobacter baumannii LAC-4 RR41_RS01325 XRE family transcriptional regulator insig. 45 97
o Rhizobium sp. OAE497 ABIE40_RS21490 XRE family transcriptional regulator sig. 45 94
  Ralstonia solanacearum GMI1000 RS_RS23520 XRE family transcriptional regulator no data 36 92
o Ralstonia solanacearum GMI1000 RS_RS23650 XRE family transcriptional regulator no data 36 92
o Klebsiella michiganensis M5al BWI76_RS13955 hypothetical protein insig. 37 93
o Enterobacter asburiae PDN3 EX28DRAFT_3141 transcriptional regulator, XRE family with cupin sensor insig. 34 92
o Enterobacter sp. TBS_079 MPMX20_03983 hypothetical protein insig. 33 92
  Pseudomonas sp. DMC3 GFF1048 HTH-type transcriptional regulator SutR no data 31 92
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2660 Putative transcriptional regulator insig. 31 92
o Pantoea sp. MT58 IAI47_18980 helix-turn-helix domain-containing protein sig. 31 93
  Pseudomonas fluorescens FW300-N2C3 AO356_23675 hydroxyacid dehydrogenase insig. 31 89
  Acinetobacter baumannii LAC-4 RR41_RS01095 XRE family transcriptional regulator insig. 32 86
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4417 Transcriptional regulator insig. 31 89
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS07555 helix-turn-helix domain-containing protein cofit 33 94
o Klebsiella pneumoniae MKP103 KDGMDA_05560 XRE family transcriptional regulator insig. 30 94
  Pseudomonas fluorescens FW300-N2C3 AO356_27170 XRE family transcriptional regulator strong 27 92
o Rahnella sp. WP5 EX31_RS05710 helix-turn-helix transcriptional regulator insig. 29 92
  Pantoea sp. MT58 IAI47_10265 helix-turn-helix domain-containing protein insig. 34 90
  Enterobacter sp. TBS_079 MPMX20_04570 HTH-type transcriptional regulator SutR strong 27 84
  Pseudomonas aeruginosa PA14 IKLFDK_11340 hydroxyacid dehydrogenase no data 30 88
  Pseudomonas aeruginosa MRSN321 DY961_RS17955 XRE family transcriptional regulator insig. 30 94
  Pseudomonas aeruginosa PUPa3 DQ20_RS59195 XRE family transcriptional regulator sig. 30 94
  Pseudomonas orientalis W4I3 QF045_RS17975 XRE family transcriptional regulator cofit 30 87
  Enterobacter asburiae PDN3 EX28DRAFT_4383 transcriptional regulator, XRE family with cupin sensor strong 29 84
o Phaeobacter inhibens DSM 17395 PGA1_c29470 puttative helix-turn-helix protein insig. 31 84
  Pseudomonas fluorescens SBW25 PFLU_RS18295 helix-turn-helix domain-containing protein insig. 29 87
  Pseudomonas fluorescens SBW25-INTG PFLU_RS18295 helix-turn-helix domain-containing protein sig. 29 87
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS05870 helix-turn-helix domain-containing protein cofit 34 90
  Rhodopseudomonas palustris CGA009 TX73_013495 XRE family transcriptional regulator insig. 33 85
  Ralstonia sp. UNC404CL21Col ABZR87_RS06145 XRE family transcriptional regulator insig. 31 92
o Dickeya dianthicola 67-19 HGI48_RS18970 helix-turn-helix transcriptional regulator cofit 28 90
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02314 hypothetical protein cofit 26 92
o Dickeya dianthicola ME23 DZA65_RS20080 helix-turn-helix transcriptional regulator insig. 27 90
  Rahnella sp. WP5 EX31_RS03010 helix-turn-helix domain-containing protein sig. 29 84
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_08380 DNA-binding protein cofit 32 85
  Erwinia tracheiphila SCR3 LU632_RS22230 helix-turn-helix domain-containing protein cofit 32 85
  Acidovorax sp. GW101-3H11 Ac3H11_1308 Transcriptional regulator no data 28 92
o Pectobacterium carotovorum WPP14 HER17_RS03720 XRE family transcriptional regulator insig. 31 83
  Klebsiella pneumoniae MKP103 KDGMDA_09135 transcriptional regulator insig. 25 84
  Pseudomonas sp. SVBP6 COO64_RS07815 helix-turn-helix domain-containing protein insig. 30 90
  Rhodospirillum rubrum S1H Rru_A2614 Transcriptional Regulator, XRE family with Cupin sensor domain (NCBI) insig. 32 85
  Synechococcus elongatus PCC 7942 Synpcc7942_2038 transcriptional regulator, XRE family with cupin sensor domain strong 28 94
o Alteromonas macleodii MIT1002 MIT1002_00748 DNA-binding transcriptional repressor PuuR insig. 27 92
o Azospirillum sp. SherDot2 MPMX19_02874 HTH-type transcriptional regulator SutR insig. 30 90
  Pectobacterium carotovorum WPP14 HER17_RS21700 XRE family transcriptional regulator cofit 30 89
  Methanococcus maripaludis S2 MMP_RS01155 XRE family transcriptional regulator strong 27 86
  Ralstonia sp. UNC404CL21Col ABZR87_RS18270 XRE family transcriptional regulator insig. 25 87
  Pseudomonas fluorescens SBW25 PFLU_RS15610 helix-turn-helix transcriptional regulator strong 27 87
  Pseudomonas fluorescens SBW25-INTG PFLU_RS15610 helix-turn-helix transcriptional regulator strong 27 87
o Sphingomonas koreensis DSMZ 15582 Ga0059261_2607 transcriptional regulator, XRE family with cupin sensor sig. 31 84
  Pseudomonas fluorescens FW300-N2E3 AO353_24090 DNA-binding protein insig. 27 87
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2260 Transcriptional regulator insig. 25 84
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2595 Transcriptional regulator yidN, Cro/CI family insig. 28 92
o Shewanella sp. ANA-3 Shewana3_0319 XRE family transcriptional regulator (RefSeq) strong 27 90
o Variovorax sp. SCN45 GFF5178 Transcriptional regulator, Xre-family with cupin domain insig. 29 93
  Methanococcus maripaludis S2 MMP_RS00545 XRE family transcriptional regulator insig. 29 79
  Serratia liquefaciens MT49 IAI46_11440 helix-turn-helix transcriptional regulator cofit 29 89
  Enterobacter asburiae PDN3 EX28DRAFT_1223 Cupin domain/Helix-turn-helix insig. 27 92
o Methanococcus maripaludis JJ MMJJ_RS04940 XRE family transcriptional regulator insig. 29 79
o Vibrio cholerae E7946 ATCC 55056 CSW01_09830 XRE family transcriptional regulator insig. 29 85
  Escherichia coli ECRC100 OKFHMN_01605 sutR DNA-binding transcriptional regulator SutR insig. 28 89
  Escherichia coli ECRC101 MCAODC_16335 sutR DNA-binding transcriptional regulator SutR insig. 28 89
  Escherichia coli ECRC102 NIAGMN_25740 sutR DNA-binding transcriptional regulator SutR no data 28 89
  Escherichia coli ECRC98 JDDGAC_04095 sutR DNA-binding transcriptional regulator SutR insig. 28 89
  Escherichia coli ECRC99 KEDOAH_26835 sutR DNA-binding transcriptional regulator SutR no data 28 89
  Klebsiella michiganensis M5al BWI76_RS00575 DNA-binding protein strong 24 84
  Serratia liquefaciens MT49 IAI46_12755 helix-turn-helix transcriptional regulator no data 29 84
  Azospirillum sp. SherDot2 MPMX19_02581 HTH-type transcriptional regulator SutR insig. 26 88
o Escherichia coli BL21 ECD_01392 putative DNA-binding transcriptional regulator no data 28 89
o Escherichia coli ECOR27 NOLOHH_19280 sutR DNA-binding transcriptional regulator SutR insig. 28 89
o Escherichia coli ECRC62 BNILDI_17730 sutR DNA-binding transcriptional regulator SutR insig. 28 89
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02281 HTH-type transcriptional regulator SutR insig. 28 89
  Escherichia coli Nissle 1917 ECOLIN_RS08275 DNA-binding transcriptional regulator SutR no data 28 89
o Escherichia coli BW25113 b1434 ydcN predicted DNA-binding transcriptional regulator (NCBI) insig. 28 89
  Variovorax sp. OAS795 ABID97_RS06760 XRE family transcriptional regulator insig. 28 85
o Azospirillum brasilense Sp245 AZOBR_RS20500 transcriptional regulator insig. 30 87
  Escherichia coli ECOR38 HEPCGN_26215 sutR DNA-binding transcriptional regulator SutR insig. 28 89
  Rhizobium sp. OAE497 ABIE40_RS01060 XRE family transcriptional regulator insig. 27 85
  Rahnella sp. WP5 EX31_RS21645 XRE family transcriptional regulator insig. 30 91