Homologs of Psyr_1246 from Pseudomonas syringae pv. syringae B728a

TPR repeat protein:TPR repeat protein
SEED: Type IV pilus biogenesis protein PilF
KEGG: type IV pilus assembly protein PilF

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas syringae pv. syringae B728a Psyr_1246 TPR repeat protein:TPR repeat protein insig. 100 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1246 TPR repeat protein:TPR repeat protein insig. 100 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_856 Type IV pilus biogenesis protein PilF insig. 74 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3180 Type IV pilus biogenesis protein PilF sig. 73 100
o Pseudomonas fluorescens FW300-N2C3 AO356_06600 pilus assembly protein PilW sig. 73 100
o Pseudomonas fluorescens FW300-N2E3 AO353_15880 pilus assembly protein PilW sig. 76 94
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4864 Type IV pilus biogenesis protein PilF insig. 76 94
o Pseudomonas sp. DMC3 GFF4341 hypothetical protein cofit 74 94
o Pseudomonas sp. RS175 PFR28_00295 hypothetical protein insig. 76 94
o Pseudomonas simiae WCS417 PS417_23155 pilus assembly protein PilW strong 68 100
o Pseudomonas stutzeri RCH2 Psest_1260 type IV pilus biogenesis/stability protein PilW strong 66 93
o Pseudomonas aeruginosa MRSN321 DY961_RS13895 pilF;inference=COORDINATES type 4a pilus biogenesis protein PilF strong 61 100
o Pseudomonas aeruginosa PA14 IKLFDK_19595 type 4a pilus biogenesis protein PilF strong 61 100
o Pseudomonas aeruginosa PUPa3 DQ20_RS43205 pilF;inference=COORDINATES type 4a pilus biogenesis protein PilF strong 61 100
o Pseudomonas segetis P6 MPMX49_01516 hypothetical protein cofit 65 94
o Pseudomonas sp. S08-1 OH686_17520 type IV pilus biogenesis/stability protein PilW cofit 61 100
o Pseudomonas fluorescens SBW25 PFLU_RS24810 type IV pilus biogenesis/stability protein PilW insig. 68 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS24810 type IV pilus biogenesis/stability protein PilW insig. 68 100
o Pseudomonas putida KT2440 PP_0851 Type IV pili biogenesis protein PilF insig. 63 94
o Pseudomonas sp. SVBP6 COO64_RS03940 pilW type IV pilus biogenesis/stability protein PilW insig. 68 94
o Pseudomonas lactucae CFBP13502 GEMAOFIL_04783 hypothetical protein insig. 66 100
o Pseudomonas orientalis W4I3 QF045_RS25375 type IV pilus biogenesis/stability protein PilW cofit 66 100
o Pseudomonas sp. BP01 JOY50_RS22775 pilW type IV pilus biogenesis/stability protein PilW insig. 64 94
o Marinobacter adhaerens HP15 HP15_1491 type IV pilus biogenesis protein PilF no data 40 92
o Acinetobacter radioresistens SK82 MPMX26_00427 Lipopolysaccharide assembly protein B cofit 36 100
o Acinetobacter baumannii LAC-4 RR41_RS16455 type IV pilus biogenesis/stability protein PilW sig. 34 98
o Dechlorosoma suillum PS Dsui_3144 type IV pilus biogenesis/stability protein PilW sig. 36 99
o Shewanella amazonensis SB2B Sama_2367 fimbrial biogenesis and twitching motility protein, putative (RefSeq) insig. 31 96
o Shewanella loihica PV-4 Shew_1288 type IV pilus biogenesis/stability protein PilW (RefSeq) strong 32 98
o Shewanella sp. ANA-3 Shewana3_1227 type IV pilus biogenesis/stability protein PilW (RefSeq) no data 32 93
o Shewanella oneidensis MR-1 SO3314 fimbrial biogenesis and twitching motility protein, putative (NCBI ptt file) sig. 31 96
o Kangiella aquimarina DSM 16071 B158DRAFT_1150 type IV pilus biogenesis/stability protein PilW strong 32 97
o Variovorax sp. SCN45 GFF993 Type IV pilus biogenesis protein PilF strong 28 95
  Variovorax sp. OAS795 ABID97_RS14215 type IV pilus biogenesis/stability protein PilW strong 30 83
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS15265 type IV pilus biogenesis/stability protein PilW no data 28 96
o Ralstonia solanacearum UW163 UW163_RS12730 type IV pilus biogenesis/stability protein PilW insig. 28 96
o Cupriavidus basilensis FW507-4G11 RR42_RS13150 pilus assembly protein PilW insig. 32 96
o Ralstonia solanacearum PSI07 RPSI07_RS18110 type IV pilus biogenesis/stability protein PilW insig. 30 83
o Ralstonia solanacearum GMI1000 RS_RS06075 type IV pilus biogenesis/stability protein PilW no data 30 83
  Vibrio cholerae E7946 ATCC 55056 CSW01_08105 type IV pilus biogenesis/stability protein PilW insig. 29 74
o Serratia liquefaciens MT49 IAI46_19285 type IV pilus biogenesis/stability protein PilW insig. 30 87
o Rahnella sp. WP5 EX31_RS20520 type IV pilus biogenesis/stability protein PilW insig. 26 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS10905 type IV pilus biogenesis/stability protein PilW strong 29 85
  Alteromonas macleodii MIT1002 MIT1002_02790 photosystem I assembly protein Ycf3 insig. 26 98
o Acidovorax sp. GW101-3H11 Ac3H11_1792 Type IV pilus biogenesis protein PilF sig. 26 97
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4865 Type IV pilus biogenesis protein PilF insig. 27 98
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS14935 type IV pilus biogenesis/stability protein PilW cofit 28 97
o Rhodanobacter denitrificans MT42 LRK55_RS18070 type IV pilus biogenesis/stability protein PilW cofit 28 83
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS00075 type IV pilus biogenesis/stability protein PilW sig. 28 83
o Pectobacterium carotovorum WPP14 HER17_RS06090 type IV pilus biogenesis/stability protein PilW insig. 28 84
o Dickeya dianthicola 67-19 HGI48_RS15585 type IV pilus biogenesis/stability protein PilW insig. 30 95
o Dickeya dianthicola ME23 DZA65_RS16660 type IV pilus biogenesis/stability protein PilW insig. 30 95
o Dickeya dadantii 3937 DDA3937_RS15475 type IV pilus biogenesis/stability protein PilW insig. 28 99
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS11190 type IV pilus biogenesis/stability protein PilW insig. 27 96
o Erwinia amylovora T8 OLJFJH_10440 type IV pilus biogenesis/stability protein PilW insig. 27 84
o Rhodanobacter sp. FW510-T8 OKGIIK_07135 pilW type IV pilus biogenesis/stability protein PilW sig. 25 94
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS05450 type IV pilus biogenesis/stability protein PilW insig. 25 87
o Pantoea sp. MT58 IAI47_05045 type IV pilus biogenesis/stability protein PilW sig. 27 97
o Methylophilus sp. DMC18 GFF1190 hypothetical protein insig. 25 96
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_02780 pilW type IV pilus biogenesis/stability protein PilW cofit 28 84
o Erwinia tracheiphila SCR3 LU632_RS17810 pilW type IV pilus biogenesis/stability protein PilW insig. 28 84
  Herbaspirillum seropedicae SmR1 HSERO_RS13825 hypothetical protein insig. 27 91
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2736.1 Type IV pilus biogenesis protein PilF insig. 25 72
  Paraburkholderia sabiae LMG 24235 QEN71_RS35255 tetratricopeptide repeat protein insig. 30 63
  Phaeobacter inhibens DSM 17395 PGA1_c01350 putative UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase insig. 30 51
  Herbaspirillum seropedicae SmR1 HSERO_RS08710 methyltransferase insig. 27 65
  Methanococcus maripaludis JJ MMJJ_RS03885 tetratricopeptide repeat protein insig. 26 56
  Lysobacter sp. OAE881 ABIE51_RS09420 type IV pilus biogenesis/stability protein PilW cofit 26 69
  Azospirillum sp. SherDot2 MPMX19_06633 Lipopolysaccharide assembly protein B insig. 27 56
  Desulfovibrio vulgaris Hildenborough JW710 DVU2614 hypothetical protein (TIGR) no data 30 42
  Magnetospirillum magneticum AMB-1 AMB_RS11910 tetratricopeptide repeat protein insig. 30 53
  Paraburkholderia sabiae LMG 24235 QEN71_RS03405 tetratricopeptide repeat-containing glycosyltransferase family protein insig. 30 54
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS14665 hypothetical protein strong 32 39
  Azospirillum sp. SherDot2 MPMX19_06650 Photosystem I assembly protein Ycf3 insig. 30 75
  Methanococcus maripaludis S2 MMP_RS03530 tetratricopeptide repeat protein insig. 28 48
  Cellulophaga baltica 18 M666_RS13335 tetratricopeptide repeat protein insig. 25 63
  Burkholderia phytofirmans PsJN BPHYT_RS19100 hypothetical protein strong 28 53
  Agrobacterium fabrum C58 Atu4063 O-linked GlcNAc transferase sig. 27 68
  Methanococcus maripaludis S2 MMP_RS03530 tetratricopeptide repeat protein insig. 25 55
  Paraburkholderia sabiae LMG 24235 QEN71_RS29105 glycosyltransferase family 41 protein insig. 27 67
  Bacteroides ovatus ATCC 8483 BACOVA_01093 hypothetical protein insig. 23 70
  Synechococcus elongatus PCC 7942 Synpcc7942_2328 TPR repeat sig. 27 58
  Desulfovibrio vulgaris Hildenborough JW710 DVU2763 TPR/GGDEF domain protein (TIGR) sig. 26 46
  Desulfovibrio vulgaris Miyazaki F DvMF_2735 TPR repeat-containing protein (RefSeq) insig. 31 43
  Caulobacter crescentus NA1000 CCNA_00118 porphyrin biosynthesis protein cofit 30 53
  Caulobacter crescentus NA1000 Δfur CCNA_00118 porphyrin biosynthesis protein cofit 30 53
  Methanococcus maripaludis S2 MMP_RS08885 tetratricopeptide repeat protein insig. 23 65
  Rhodopseudomonas palustris CGA009 TX73_020300 tetratricopeptide repeat protein insig. 27 67
  Desulfovibrio vulgaris Miyazaki F DvMF_2851 diguanylate cyclase and serine/threonine protein kinase with TPR repeats (RefSeq) strong 28 44
  Variovorax sp. SCN45 GFF5370 TPR domain protein, putative component of TonB system insig. 27 73
  Magnetospirillum magneticum AMB-1 AMB_RS11910 tetratricopeptide repeat protein insig. 24 75
  Paraburkholderia graminis OAS925 ABIE53_004037 tetratricopeptide (TPR) repeat protein insig. 31 42
  Paraburkholderia sabiae LMG 24235 QEN71_RS29130 tetratricopeptide repeat protein strong 30 50
  Dechlorosoma suillum PS Dsui_1785 Tfp pilus assembly protein PilF cofit 29 50
  Azospirillum sp. SherDot2 MPMX19_04212 Photosystem I assembly protein Ycf3 cofit 25 69
  Paraburkholderia sabiae LMG 24235 QEN71_RS02615 tetratricopeptide repeat protein insig. 28 62
  Rhizobium sp. OAE497 ABIE40_RS16570 tetratricopeptide repeat protein sig. 27 58
  Paraburkholderia sabiae LMG 24235 QEN71_RS03405 tetratricopeptide repeat-containing glycosyltransferase family protein insig. 29 44
  Desulfovibrio vulgaris Hildenborough JW710 DVU2763 TPR/GGDEF domain protein (TIGR) sig. 28 62
  Sinorhizobium meliloti 1021 SMc03985 adenylate/guanylate cyclase insig. 38 28