Homologs of Pf1N1B4_1235 from Pseudomonas fluorescens FW300-N1B4

Exodeoxyribonuclease V beta chain (EC 3.1.11.5)
SEED: Exodeoxyribonuclease V beta chain (EC 3.1.11.5)
KEGG: exodeoxyribonuclease V beta subunit

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1235 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) sig. 100 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_5151 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) sig. 91 100
o Pseudomonas fluorescens FW300-N2E3 AO353_06045 exodeoxyribonuclease V subunit beta strong 89 100
o Pseudomonas fluorescens FW300-N2C3 AO356_07915 exodeoxyribonuclease V subunit beta sig. 85 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3460 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) insig. 85 100
o Pseudomonas sp. RS175 PFR28_00007 RecBCD enzyme subunit RecB insig. 83 100
o Pseudomonas simiae WCS417 PS417_23775 exodeoxyribonuclease V subunit beta strong 82 100
o Pseudomonas fluorescens SBW25 PFLU_RS25590 exodeoxyribonuclease V subunit beta strong 82 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS25590 exodeoxyribonuclease V subunit beta no data 82 100
o Pseudomonas syringae pv. syringae B728a Psyr_0681 DNA helicase/exodeoxyribonuclease V, beta subunit no data 78 98
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0681 DNA helicase/exodeoxyribonuclease V, beta subunit no data 78 98
o Pseudomonas putida KT2440 PP_4673 Chi activated ATP-dependent DNA helicase and dsDNA/ssDNA exonuclease no data 70 99
o Dickeya dadantii 3937 DDA3937_RS11080 exodeoxyribonuclease V subunit beta insig. 55 99
o Dickeya dianthicola 67-19 HGI48_RS11100 exodeoxyribonuclease V subunit beta no data 54 99
o Dickeya dianthicola ME23 DZA65_RS11480 exodeoxyribonuclease V subunit beta no data 54 99
o Rahnella sp. WP5 EX31_RS20735 exodeoxyribonuclease V subunit beta strong 53 98
o Paraburkholderia graminis OAS925 ABIE53_000495 exodeoxyribonuclease V beta subunit insig. 49 99
o Marinobacter adhaerens HP15 HP15_3713 exodeoxyribonuclease V, beta subunit no data 47 99
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS07665 exodeoxyribonuclease V subunit beta strong 49 98
o Castellaniella sp019104865 MT123 ABCV34_RS02965 exodeoxyribonuclease V subunit beta sig. 44 98
o Escherichia coli ECRC62 BNILDI_10415 recB exodeoxyribonuclease V subunit beta no data 42 98
o Escherichia coli BL21 ECD_02668 exonuclease V (RecBCD complex), beta subunit no data 42 98
o Escherichia fergusonii Becca EFB2_01064 RecBCD enzyme subunit RecB strong 42 98
o Escherichia coli ECOR38 HEPCGN_19305 recB exodeoxyribonuclease V subunit beta cofit 42 98
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00910 RecBCD enzyme subunit RecB no data 42 98
o Escherichia coli BW25113 b2820 recB exonuclease V (RecBCD complex), beta subunit (NCBI) strong 42 98
o Escherichia coli Nissle 1917 ECOLIN_RS15830 exodeoxyribonuclease V subunit beta no data 42 98
o Klebsiella michiganensis M5al BWI76_RS23230 exodeoxyribonuclease V subunit beta strong 43 98
o Escherichia coli ECOR27 NOLOHH_11935 recB exodeoxyribonuclease V subunit beta no data 42 98
o Escherichia coli ECRC101 OKFHMN_20050 recB exodeoxyribonuclease V subunit beta no data 42 98
o Escherichia coli ECRC101 MCAODC_10575 recB exodeoxyribonuclease V subunit beta no data 42 98
o Escherichia coli ECRC102 NIAGMN_17820 recB exodeoxyribonuclease V subunit beta no data 42 98
o Escherichia coli ECRC98 JDDGAC_23715 recB exodeoxyribonuclease V subunit beta no data 42 98
o Escherichia coli ECRC99 KEDOAH_08080 recB exodeoxyribonuclease V subunit beta no data 42 98
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1301 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) no data 42 99
o Pectobacterium carotovorum WPP14 HER17_RS16525 exodeoxyribonuclease V subunit beta strong 41 98
o Enterobacter asburiae PDN3 EX28DRAFT_2895 DNA helicase/exodeoxyribonuclease V, beta subunit (EC 3.1.11.5) no data 41 99
o Enterobacter sp. TBS_079 MPMX20_03683 RecBCD enzyme subunit RecB strong 41 99
o Serratia liquefaciens MT49 IAI46_20405 exodeoxyribonuclease V subunit beta no data 41 99
o Vibrio cholerae E7946 ATCC 55056 CSW01_11780 exodeoxyribonuclease V subunit beta strong 39 98
o Pantoea sp. MT58 IAI47_03965 exodeoxyribonuclease V subunit beta no data 40 99
o Erwinia tracheiphila SCR3 LU632_RS06190 recB exodeoxyribonuclease V subunit beta no data 40 98
o Shewanella loihica PV-4 Shew_2130 exodeoxyribonuclease V, beta subunit (RefSeq) no data 37 100
o Shewanella amazonensis SB2B Sama_1901 exodeoxyribonuclease V, beta subunit (RefSeq) no data 38 99
o Shewanella sp. ANA-3 Shewana3_2246 exodeoxyribonuclease V, beta subunit (RefSeq) no data 36 99
o Shewanella oneidensis MR-1 SO2148 recB exodeoxyribonuclease V, beta subunit (NCBI ptt file) no data 35 98
o Pseudomonas stutzeri RCH2 Psest_0213 exodeoxyribonuclease V, beta subunit no data 36 98
o Alteromonas macleodii MIT1002 MIT1002_02360 Exodeoxyribonuclease V beta chain no data 32 98
o Lysobacter sp. OAE881 ABIE51_RS01025 exodeoxyribonuclease V subunit beta strong 34 98
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05086 DNA helicase/exodeoxyribonuclease V, beta subunit insig. 33 98
o Pseudomonas sp. S08-1 OH686_12075 Exodeoxyribonuclease V beta chain cofit 37 70
  Burkholderia phytofirmans PsJN BPHYT_RS07975 exodeoxyribonuclease V subunit beta no data 35 70
o Paraburkholderia sabiae LMG 24235 QEN71_RS23190 exodeoxyribonuclease V subunit beta insig. 35 72
o Rhodanobacter sp. FW510-T8 OKGIIK_09230 RecBCD enzyme subunit RecB insig. 33 98
  Paraburkholderia graminis OAS925 ABIE53_001811 exodeoxyribonuclease V beta subunit strong 34 70
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.5353.1 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) no data 32 88
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS02180 UvrD-helicase domain-containing protein strong 33 98
o Rhodanobacter denitrificans MT42 LRK55_RS01930 UvrD-helicase domain-containing protein insig. 32 98
  Acinetobacter radioresistens SK82 MPMX26_00272 RecBCD enzyme subunit RecB strong 29 73
  Mycobacterium tuberculosis H37Rv Rv0630c Probable exonuclease V (beta chain) RecB (exodeoxyribonuclease V beta chain)(exodeoxyribonuclease V polypeptide) (chi-specific endonuclease) insig. 32 42
  Dinoroseobacter shibae DFL-12 Dshi_3438 Double-strand break repair helicase AddA (RefSeq) no data 26 68
  Burkholderia phytofirmans PsJN BPHYT_RS07975 exodeoxyribonuclease V subunit beta no data 40 15
o Paraburkholderia sabiae LMG 24235 QEN71_RS23190 exodeoxyribonuclease V subunit beta insig. 42 13
  Rhodopseudomonas palustris CGA009 TX73_011430 UvrD-helicase domain-containing protein cofit 28 40
  Paraburkholderia graminis OAS925 ABIE53_001811 exodeoxyribonuclease V beta subunit strong 40 15
  Agrobacterium fabrum C58 Atu0023 ATP-dependant DNA helicase no data 25 40
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS11290 double-strand break repair helicase AddA insig. 25 69
  Phocaeicola dorei CL03T12C01 ABI39_RS17735 UvrD-helicase domain-containing protein no data 22 40
  Acinetobacter radioresistens SK82 MPMX26_00272 RecBCD enzyme subunit RecB strong 36 13
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS03305 UvrD-helicase domain-containing protein strong 23 41
  Sinorhizobium meliloti 1021 SMc02760 ATP-dependent nuclease/helicase no data 26 44
  Caulobacter crescentus NA1000 CCNA_03652 ATP-dependent nuclease subunit A strong 28 37
  Caulobacter crescentus NA1000 Δfur CCNA_03652 ATP-dependent nuclease subunit A cofit 28 37
  Mycobacterium tuberculosis H37Rv Rv0630c Probable exonuclease V (beta chain) RecB (exodeoxyribonuclease V beta chain)(exodeoxyribonuclease V polypeptide) (chi-specific endonuclease) insig. 39 9
  Sphingomonas koreensis DSMZ 15582 Ga0059261_4027 DNA helicase/exodeoxyribonuclease V, subunit A (EC 3.1.11.5) no data 27 40
  Phaeobacter inhibens DSM 17395 PGA1_c35310 double strand break repair helicase AddA no data 26 41
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_05920 hypothetical protein no data 21 67
  Bacteroides ovatus ATCC 8483 BACOVA_02365 UvrD/REP helicase no data 24 48
  Synechococcus elongatus PCC 7942 Synpcc7942_1157 hypothetical protein insig. 26 43
  Rhodopseudomonas palustris CGA009 TX73_000385 double-strand break repair helicase AddA cofit 25 37
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0292 Superfamily I DNA and RNA helicases no data 22 40
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS03535 UvrD-helicase domain-containing protein cofit 26 37
  Variovorax sp. OAS795 ABID97_RS18290 UvrD-helicase domain-containing protein insig. 25 37
  Ralstonia solanacearum PSI07 RPSI07_RS18225 ATP-dependent exonuclease no data 27 41
  Azospirillum brasilense Sp245 AZOBR_RS12445 DNA helicase II insig. 24 52
  Bifidobacterium breve UCC2003 BBR_RS14985 ATP-dependent DNA helicase PcrA strong 23 39
  Ralstonia sp. UNC404CL21Col ABZR87_RS10785 exodeoxyribonuclease V subunit beta strong 26 42
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS03560 3'-5' exonuclease insig. 21 40
  Mycobacterium tuberculosis H37Rv Rv0949 Probable ATP-dependent DNA helicase II UvrD1 insig. 29 18
  Phocaeicola dorei CL03T12C01 ABI39_RS17615 UvrD-helicase domain-containing protein no data 25 37
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_07795 ATP-dependent DNA helicase no data 22 40
  Bosea sp. OAE506 ABIE41_RS01165 ATP-dependent helicase insig. 33 11
  Bacteroides ovatus ATCC 8483 BACOVA_04090 UvrD/REP helicase no data 24 44
  Rhodopseudomonas palustris CGA009 TX73_014510 ATP-dependent helicase insig. 33 11
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS18830 DNA helicase UvrD strong 22 37
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.5266.1 ATP-dependent DNA helicase Rep no data 23 40
  Bacteroides thetaiotaomicron VPI-5482 BT0657 ATP-dependent DNA helicase (NCBI ptt file) no data 31 16
  Variovorax sp. OAS795 ABID97_RS05510 UvrD-helicase domain-containing protein no data 23 37
  Magnetospirillum magneticum AMB-1 AMB_RS21065 double-strand break repair helicase AddA no data 26 40
  Rhizobium sp. OAE497 ABIE40_RS19360 double-strand break repair helicase AddA strong 29 11