Homologs of PP_4670 from Pseudomonas putida KT2440

diguanylate cyclase
SEED: Inner membrane protein YfiN

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_4670 diguanylate cyclase sig. 100 100
o Pseudomonas sp. BP01 JOY50_RS27620 diguanylate cyclase domain-containing protein insig. 93 100
o Pseudomonas sp. SVBP6 COO64_RS02695 diguanylate cyclase domain-containing protein insig. 77 98
o Pseudomonas fluorescens FW300-N2E3 AO353_06010 diguanylate cyclase insig. 70 98
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3456 Inner membrane protein YfiN sig. 69 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1232 Inner membrane protein YfiN insig. 68 99
o Pseudomonas orientalis W4I3 QF045_RS25995 diguanylate cyclase insig. 68 100
o Pseudomonas simiae WCS417 PS417_23760 DeoR faimly transcriptional regulator sig. 68 98
o Pseudomonas fluorescens SBW25 PFLU_RS25575 diguanylate cyclase insig. 67 98
o Pseudomonas fluorescens SBW25-INTG PFLU_RS25575 diguanylate cyclase sig. 67 98
o Pseudomonas sp. RS175 PFR28_00010 Diguanylate cyclase DgcN sig. 71 94
o Pseudomonas lactucae CFBP13502 GEMAOFIL_04898 Diguanylate cyclase DgcN insig. 67 98
o Pseudomonas sp. DMC3 GFF4916 Diguanylate cyclase DgcN insig. 66 98
o Pseudomonas fluorescens FW300-N2C3 AO356_07900 diguanylate cyclase insig. 69 99
o Pseudomonas aeruginosa PA14 IKLFDK_05170 diguanylate cyclase TpbB insig. 61 95
o Pseudomonas aeruginosa MRSN321 DY961_RS06835 tpbB;inference=COORDINATES diguanylate cyclase TpbB sig. 61 95
o Pseudomonas aeruginosa PUPa3 DQ20_RS45995 tpbB;inference=COORDINATES diguanylate cyclase TpbB cofit 61 95
o Serratia liquefaciens MT49 IAI46_02975 diguanylate cyclase cofit 58 97
o Cupriavidus basilensis FW507-4G11 RR42_RS22840 DeoR family transcriptional regulator insig. 53 97
o Rahnella sp. WP5 EX31_RS04230 diguanylate cyclase insig. 46 95
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3400 diguanylate cyclase (GGDEF) domain insig. 44 94
o Sphingobium sp. HT1-2 GFF4568 hypothetical protein cofit 44 90
o Dickeya dianthicola 67-19 HGI48_RS16615 diguanylate cyclase insig. 37 93
o Dickeya dadantii 3937 DDA3937_RS16545 diguanylate cyclase insig. 37 93
o Dickeya dianthicola ME23 DZA65_RS17705 diguanylate cyclase insig. 37 93
o Enterobacter asburiae PDN3 EX28DRAFT_2705 diguanylate cyclase (GGDEF) domain insig. 36 94
o Enterobacter sp. TBS_079 MPMX20_03472 Diguanylate cyclase DgcN insig. 35 93
o Escherichia fergusonii Becca EFB2_01288 Diguanylate cyclase DgcN insig. 36 93
o Klebsiella pneumoniae MKP103 KDGMDA_02185 diguanylate cyclase DgcN insig. 35 95
o Escherichia coli Nissle 1917 ECOLIN_RS14720 diguanylate cyclase DgcN insig. 36 93
o Escherichia coli ECOR27 NOLOHH_12875 dgcN diguanylate cyclase DgcN insig. 36 93
o Escherichia coli ECRC62 BNILDI_11680 dgcN diguanylate cyclase DgcN cofit 36 93
o Escherichia coli BW25113 b2604 yfiN predicted diguanylate cyclase (NCBI) insig. 36 93
o Escherichia coli BL21 ECD_02493 putative membrane-anchored diguanylate cyclase cofit 36 93
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01102 Diguanylate cyclase DgcN insig. 36 93
o Escherichia coli ECRC100 OKFHMN_21200 dgcN diguanylate cyclase DgcN insig. 36 93
o Escherichia coli ECRC101 MCAODC_11730 dgcN diguanylate cyclase DgcN insig. 36 93
o Escherichia coli ECRC102 NIAGMN_18970 dgcN diguanylate cyclase DgcN insig. 36 93
o Escherichia coli ECRC98 JDDGAC_24865 dgcN diguanylate cyclase DgcN insig. 36 93
o Escherichia coli ECRC99 KEDOAH_07020 dgcN diguanylate cyclase DgcN no data 36 93
o Klebsiella michiganensis M5al BWI76_RS21490 GGDEF domain-containing protein cofit 34 93
o Acinetobacter baumannii LAC-4 RR41_RS02635 diguanylate cyclase insig. 31 95
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4174 Inner membrane protein YfiN insig. 36 88
o Escherichia coli ECOR38 HEPCGN_20320 dgcN diguanylate cyclase DgcN insig. 36 82
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS13985 diguanylate cyclase cofit 33 86
o Pantoea sp. MT58 IAI47_20475 diguanylate cyclase insig. 32 85
  Pseudomonas aeruginosa MRSN321 DY961_RS22900 EAL domain-containing protein insig. 51 40
  Pseudomonas aeruginosa PUPa3 DQ20_RS36445 EAL domain-containing protein insig. 51 40
  Pseudomonas sp. S08-1 OH686_14965 Sensory box/GGDEF family protein cofit 51 40
  Pseudomonas aeruginosa PA14 IKLFDK_22535 bifunctional diguanylate cyclase/phosphodiesterase insig. 51 40
  Dechlorosoma suillum PS Dsui_1824 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 51 40
  Burkholderia phytofirmans PsJN BPHYT_RS29510 deoxyuridine 5`-triphosphate nucleotidohydrolase insig. 40 58
  Magnetospirillum magneticum AMB-1 AMB_RS18310 bifunctional diguanylate cyclase/phosphodiesterase cofit 49 39
  Pseudomonas sp. SVBP6 COO64_RS22585 EAL domain-containing protein insig. 51 40
  Herbaspirillum seropedicae SmR1 HSERO_RS16570 membrane protein insig. 46 43
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS07185 EAL domain-containing protein cofit 47 38
  Burkholderia phytofirmans PsJN BPHYT_RS29225 diguanylate phosphodiesterase insig. 47 43
  Kangiella aquimarina DSM 16071 B158DRAFT_0304 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 47 39
  Paraburkholderia graminis OAS925 ABIE53_005160 diguanylate cyclase (GGDEF)-like protein strong 39 58
  Pseudomonas sp. BP01 JOY50_RS18065 bifunctional diguanylate cyclase/phosphodiesterase insig. 50 40
  Azospirillum brasilense Sp245 AZOBR_RS17635 hypothetical protein insig. 40 56
  Shewanella amazonensis SB2B Sama_3265 GGDEF domain-containing protein (RefSeq) insig. 43 52
  Magnetospirillum magneticum AMB-1 AMB_RS21020 bifunctional diguanylate cyclase/phosphodiesterase insig. 49 43
  Alteromonas macleodii MIT1002 MIT1002_01199 Bacteriophytochrome cph2 insig. 42 44
  Pseudomonas putida KT2440 PP_0386 Sensory box protein sig. 48 40
  Castellaniella sp019104865 MT123 ABCV34_RS00960 EAL domain-containing protein insig. 46 41
  Herbaspirillum seropedicae SmR1 HSERO_RS04295 diguanylate cyclase strong 45 43
  Dechlorosoma suillum PS Dsui_3449 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 42 45
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01520 diguanylate cyclase (GGDEF) domain-containing protein insig. 40 53
  Marinobacter adhaerens HP15 HP15_947 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor insig. 48 38
  Pseudomonas fluorescens FW300-N2C3 AO356_24220 diguanylate cyclase insig. 46 42
  Pseudomonas fluorescens FW300-N2C3 AO356_14260 diguanylate cyclase insig. 49 40
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4790 sensory box/GGDEF domain/EAL domain protein sig. 49 40
  Cupriavidus basilensis FW507-4G11 RR42_RS22465 membrane protein insig. 47 39
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1640 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 45 42
  Pseudomonas sp. RS175 PFR28_04079 Membrane-bound lytic murein transglycosylase F insig. 49 40
  Pseudomonas fluorescens FW300-N2E3 AO353_07390 diguanylate cyclase insig. 48 40
  Azospirillum sp. SherDot2 MPMX19_06128 hypothetical protein insig. 45 42
  Rhodanobacter sp. FW510-T8 OKGIIK_07905 Diguanylate cyclase insig. 46 38
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1185 sensory box/GGDEF domain/EAL domain protein insig. 48 40
  Rhodospirillum rubrum S1H Rru_A0558 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) (NCBI) insig. 44 42
  Rhodanobacter denitrificans MT42 LRK55_RS16650 EAL domain-containing protein strong 46 38
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS16935 bifunctional diguanylate cyclase/phosphodiesterase strong 46 38
  Pseudomonas segetis P6 MPMX49_00863 hypothetical protein insig. 44 43
  Dechlorosoma suillum PS Dsui_1564 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 47 39
  Shewanella loihica PV-4 Shew_0306 diguanylate cyclase/phosphodiesterase with GAF sensor (RefSeq) cofit 47 40
  Pseudomonas fluorescens SBW25 PFLU_RS27540 bifunctional diguanylate cyclase/phosphodiesterase insig. 47 40
  Pseudomonas fluorescens SBW25-INTG PFLU_RS27540 bifunctional diguanylate cyclase/phosphodiesterase insig. 47 40
  Dechlorosoma suillum PS Dsui_2160 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 47 39
  Shewanella oneidensis MR-1 SO0341 sensory box protein (NCBI ptt file) insig. 46 38
  Magnetospirillum magneticum AMB-1 AMB_RS11515 DUF3365 domain-containing protein insig. 46 40
  Shewanella oneidensis MR-1 SO0427 sensory box protein (NCBI ptt file) sig. 41 40
  Shewanella sp. ANA-3 Shewana3_0429 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 41 40
  Pseudomonas sp. S08-1 OH686_00995 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 45 39
  Shewanella loihica PV-4 Shew_3428 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) insig. 40 40
  Shewanella sp. ANA-3 Shewana3_3829 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) cofit 45 41
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05297 Membrane-bound lytic murein transglycosylase F cofit 48 40
  Dechlorosoma suillum PS Dsui_2605 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 46 42
  Magnetospirillum magneticum AMB-1 AMB_RS15005 two-component system response regulator insig. 46 39
  Desulfovibrio vulgaris Miyazaki F DvMF_1530 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 45 41