Homologs of PP_3949 from Pseudomonas putida KT2440

HTH-type transcriptional repressor NicS

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_3949 HTH-type transcriptional repressor NicS insig. 100 100
o Pseudomonas sp. BP01 JOY50_RS03845 TetR family transcriptional regulator no data 97 100
o Pseudomonas simiae WCS417 PS417_13040 TetR family transcriptional regulator insig. 70 99
o Pseudomonas fluorescens SBW25 PFLU_RS13680 TetR/AcrR family transcriptional regulator insig. 70 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS13680 TetR/AcrR family transcriptional regulator insig. 70 99
o Paraburkholderia graminis OAS925 ABIE53_004272 AcrR family transcriptional regulator sig. 56 97
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01592 transcriptional regulator, TetR family sig. 56 97
o Burkholderia phytofirmans PsJN BPHYT_RS21465 TetR family transcriptional regulator insig. 56 97
o Acidovorax sp. GW101-3H11 Ac3H11_3440 Transcriptional regulator, TetR family insig. 55 97
o Cupriavidus basilensis FW507-4G11 RR42_RS21650 TetR family transcriptional regulator insig. 57 91
o Variovorax sp. SCN45 GFF6388 Transcriptional regulator, AcrR family cofit 52 98
o Variovorax sp. OAS795 ABID97_RS03495 TetR family transcriptional regulator strong 51 98
  Variovorax sp. SCN45 GFF4821 Transcriptional regulator, AcrR family cofit 44 94
  Ralstonia solanacearum UW163 UW163_RS11670 TetR/AcrR family transcriptional regulator insig. 46 84
  Variovorax sp. OAS795 ABID97_RS11095 TetR/AcrR family transcriptional regulator strong 44 94
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS14205 TetR/AcrR family transcriptional regulator insig. 46 84
  Ralstonia solanacearum PSI07 RPSI07_RS19255 TetR/AcrR family transcriptional regulator insig. 45 84
  Ralstonia sp. UNC404CL21Col ABZR87_RS09925 TetR/AcrR family transcriptional regulator insig. 44 83
  Ralstonia solanacearum GMI1000 RS_RS04985 TetR/AcrR family transcriptional regulator insig. 44 84
  Cupriavidus basilensis FW507-4G11 RR42_RS05980 TetR family transcriptional regulator sig. 42 93
o Sinorhizobium meliloti 1021 SMc04134 transcriptional regulator insig. 41 98
  Burkholderia phytofirmans PsJN BPHYT_RS20790 TetR family transcriptional regulator sig. 40 100
  Pseudomonas syringae pv. syringae B728a Psyr_2131 transcriptional regulator, TetR family insig. 37 96
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2131 transcriptional regulator, TetR family insig. 37 96
  Sinorhizobium meliloti 1021 SMa1428 TetR/AcrR family transcriptional regulator insig. 41 94
o Rhizobium sp. OAE497 ABIE40_RS00085 TetR family transcriptional regulator strong 38 99
  Acidovorax sp. GW101-3H11 Ac3H11_1230 Transcriptional regulator, TetR family strong 38 96
  Pseudomonas sp. DMC3 GFF3935 HTH-type transcriptional repressor NicS insig. 37 96
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00295 transcriptional regulator, TetR family insig. 39 91
  Burkholderia phytofirmans PsJN BPHYT_RS06090 TetR family transcriptional regulator insig. 39 91
  Paraburkholderia graminis OAS925 ABIE53_001425 AcrR family transcriptional regulator strong 39 91
  Pseudomonas sp. SVBP6 COO64_RS02845 TetR/AcrR family transcriptional regulator insig. 34 96
  Pseudomonas fluorescens FW300-N2E3 AO353_06180 TetR family transcriptional regulator insig. 34 100
  Ralstonia solanacearum GMI1000 RS_RS23855 TetR/AcrR family transcriptional regulator sig. 37 95
  Ralstonia solanacearum PSI07 RPSI07_RS06190 TetR/AcrR family transcriptional regulator cofit 36 96
  Pseudomonas aeruginosa MRSN321 DY961_RS27485 TetR/AcrR family transcriptional regulator sig. 35 96
  Pseudomonas aeruginosa PA14 IKLFDK_24365 TetR family transcriptional regulator insig. 35 96
  Pseudomonas aeruginosa PUPa3 DQ20_RS32035 TetR/AcrR family transcriptional regulator insig. 35 96
  Azospirillum sp. SherDot2 MPMX19_03530 HTH-type transcriptional repressor NicS insig. 37 92
  Pseudomonas sp. BP01 JOY50_RS27395 TetR/AcrR family transcriptional regulator insig. 36 97
  Pseudomonas putida KT2440 PP_3527 Transcriptional regulator, TetR family strong 36 97
o Azospirillum brasilense Sp245 AZOBR_RS11765 TetR family transcriptional regulator sig. 39 92
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS17460 TetR/AcrR family transcriptional regulator strong 36 96
  Ralstonia solanacearum UW163 UW163_RS21690 TetR/AcrR family transcriptional regulator insig. 36 96
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2748 Transcriptional regulator, TetR family strong 35 99
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1426 Transcriptional regulator, TetR family insig. 35 99
o Paraburkholderia sabiae LMG 24235 QEN71_RS24550 TetR family transcriptional regulator insig. 38 93
  Sinorhizobium meliloti 1021 SM_b20033 transcriptional regulator insig. 37 96
  Agrobacterium fabrum C58 Atu3115 TetR family transcriptional regulator strong 38 98
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2181 Transcriptional regulator, TetR family insig. 40 93
  Azospirillum sp. SherDot2 MPMX19_02996 HTH-type transcriptional repressor NicS insig. 37 92
  Pseudomonas simiae WCS417 PS417_24440 TetR family transcriptional regulator sig. 33 96
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5059 Transcriptional regulator, TetR family strong 34 96
  Pseudomonas segetis P6 ACVTMO_RS13450 TetR family transcriptional regulator sig. 35 96
  Pseudomonas sp. RS175 PFR28_03812 HTH-type transcriptional repressor NicS strong 34 96
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05034 HTH-type transcriptional repressor NicS insig. 33 96
  Pseudomonas fluorescens SBW25 PFLU_RS26365 TetR/AcrR family transcriptional regulator insig. 32 96
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26365 TetR/AcrR family transcriptional regulator strong 32 96
  Pseudomonas orientalis W4I3 QF045_RS26705 TetR/AcrR family transcriptional regulator insig. 32 96
  Xanthobacter sp. DMC5 GFF4550 HTH-type transcriptional repressor NicS insig. 39 95
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3964 Transcriptional regulator, TetR family insig. 41 80
  Pseudomonas fluorescens FW300-N2C3 AO356_15585 TetR family transcriptional regulator insig. 33 96
  Cupriavidus basilensis FW507-4G11 RR42_RS22890 TetR family transcriptional regulator strong 37 96
  Variovorax sp. SCN45 GFF6166 Transcriptional regulator, AcrR family insig. 34 99
  Burkholderia phytofirmans PsJN BPHYT_RS26065 TetR family transcriptional regulator insig. 37 92
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02962 transcriptional regulator, TetR family insig. 35 92
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS01375 TetR family transcriptional regulator cofit 34 88
  Pantoea sp. MT58 IAI47_07270 TetR family transcriptional regulator insig. 34 88
  Castellaniella sp019104865 MT123 ABCV34_RS11575 TetR/AcrR family transcriptional regulator insig. 34 97
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5228 Transcriptional regulator, TetR family strong 32 98
  Caulobacter crescentus NA1000 CCNA_02691 TetR-family transcriptional regulator strong 37 86
  Caulobacter crescentus NA1000 Δfur CCNA_02691 TetR-family transcriptional regulator cofit 37 86
  Agrobacterium fabrum C58 Atu4530 TetR family transcriptional regulator strong 34 97
  Burkholderia phytofirmans PsJN BPHYT_RS22695 TetR family transcriptional regulator sig. 33 99
  Paraburkholderia sabiae LMG 24235 QEN71_RS13120 TetR family transcriptional regulator insig. 32 96
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03218 transcriptional regulator, TetR family strong 32 99
  Paraburkholderia graminis OAS925 ABIE53_004073 AcrR family transcriptional regulator strong 32 96
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2251 Transcriptional regulator, TetR family sig. 35 87
  Serratia liquefaciens MT49 IAI46_12895 TetR family transcriptional regulator insig. 34 80
  Rahnella sp. WP5 EX31_RS06045 TetR family transcriptional regulator insig. 34 91
  Klebsiella michiganensis M5al BWI76_RS16950 TetR family transcriptional regulator insig. 33 82
  Xanthobacter sp. DMC5 GFF3335 hypothetical protein insig. 34 91
  Escherichia fergusonii Becca EFB2_04323 HTH-type transcriptional repressor NicS insig. 31 84
  Escherichia coli Nissle 1917 ECOLIN_RS24435 TetR/AcrR family transcriptional regulator insig. 31 84
  Klebsiella pneumoniae MKP103 KDGMDA_24120 TetR family transcriptional regulator insig. 31 98
  Escherichia coli ECOR38 HEPCGN_10290 acrR TetR/AcrR family transcriptional regulator insig. 31 84
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03830 HTH-type transcriptional repressor NicS sig. 31 84
  Enterobacter asburiae PDN3 EX28DRAFT_3565 transcriptional regulator, TetR family insig. 33 84
  Escherichia coli ECRC62 BNILDI_07175 TetR/AcrR family transcriptional regulator cofit 30 86
  Enterobacter sp. TBS_079 MPMX20_00655 HTH-type transcriptional repressor NicS insig. 32 84
  Sphingobium sp. HT1-2 GFF1524 Transcriptional regulator, AcrR family cofit 31 93
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3424 Transcriptional regulator, TetR family insig. 28 96
o Marinobacter adhaerens HP15 HP15_14 transcriptional regulator, TetR family insig. 29 88
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1441 Transcriptional regulator insig. 31 74
  Klebsiella michiganensis M5al BWI76_RS10785 transcriptional regulator strong 30 69
  Escherichia fergusonii Becca EFB2_03067 HTH-type transcriptional regulator RutR insig. 30 69
  Escherichia coli ECOR27 NOLOHH_21510 rutR HTH-type transcriptional regulator RutR insig. 30 69
  Escherichia coli ECRC62 BNILDI_19675 rutR HTH-type transcriptional regulator RutR insig. 30 69
  Escherichia coli Nissle 1917 ECOLIN_RS05285 HTH-type transcriptional regulator RutR no data 30 69
  Escherichia coli BW25113 b1013 ycdC predicted DNA-binding transcriptional regulator (NCBI) sig. 30 69