Homologs of PP_3456 from Pseudomonas putida KT2440

Multidrug resistance protein MexB
SEED: RND efflux system, inner membrane transporter CmeB
KEGG: hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_3456 Multidrug resistance protein MexB strong 100 100
o Pseudomonas sp. BP01 JOY50_RS19675 efflux RND transporter permease subunit insig. 96 99
o Pseudomonas sp. SVBP6 COO64_RS25445 efflux RND transporter permease subunit insig. 87 100
o Pseudomonas fluorescens FW300-N2E3 AO353_26845 acriflavine resistance protein B strong 83 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4772 RND efflux system, inner membrane transporter CmeB strong 83 99
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2954 RND efflux system, inner membrane transporter CmeB strong 81 99
o Pseudomonas sp. DMC3 GFF2918 Multidrug efflux pump subunit AcrB cofit 82 99
o Pseudomonas fluorescens FW300-N2C3 AO356_28730 acriflavine resistance protein B strong 82 97
o Pseudomonas sp. RS175 PFR28_02463 Multidrug resistance protein MexB insig. 82 99
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1661 RND efflux system, inner membrane transporter CmeB strong 82 97
o Pseudomonas orientalis W4I3 QF045_RS17295 efflux RND transporter permease subunit cofit 81 99
o Pseudomonas lactucae CFBP13502 GEMAOFIL_02772 Multidrug resistance protein MexB cofit 81 97
o Pseudomonas fluorescens SBW25 PFLU_RS13280 multidrug efflux RND transporter permease subunit insig. 81 97
o Pseudomonas fluorescens SBW25-INTG PFLU_RS13280 multidrug efflux RND transporter permease subunit sig. 81 97
o Pseudomonas simiae WCS417 PS417_12585 acriflavine resistance protein B strong 81 99
o Herbaspirillum seropedicae SmR1 HSERO_RS02410 acriflavine resistance protein B strong 64 100
o Ralstonia solanacearum GMI1000 RS_RS00045 multidrug efflux RND transporter permease subunit strong 64 97
o Ralstonia solanacearum PSI07 RPSI07_RS23905 hydrophobe/amphiphile efflux-1 family RND transporter strong 64 97
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS09445 multidrug efflux RND transporter permease subunit strong 64 97
o Ralstonia solanacearum UW163 UW163_RS04135 multidrug efflux RND transporter permease subunit insig. 64 97
o Ralstonia sp. UNC404CL21Col ABZR87_RS05315 efflux RND transporter permease subunit strong 64 97
o Sinorhizobium meliloti 1021 SMc02867 multidrug-efflux system transmembrane protein strong 64 100
o Dechlorosoma suillum PS Dsui_3182 hydrophobe/amphiphile efflux-1 (HAE1) family transporter no data 61 99
o Agrobacterium fabrum C58 Atu3202 RND multidrug efflux transporter strong 64 97
o Dickeya dadantii 3937 DDA3937_RS07155 multidrug efflux RND transporter permease subunit insig. 62 97
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3840 RND efflux system, inner membrane transporter CmeB insig. 61 99
  Pseudomonas syringae pv. syringae B728a Psyr_2282 Hydrophobe/amphiphile efflux-1 HAE1 strong 62 99
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2282 Hydrophobe/amphiphile efflux-1 HAE1 strong 62 99
o Acidovorax sp. GW101-3H11 Ac3H11_4448 RND efflux system, inner membrane transporter CmeB strong 61 97
o Rhodopseudomonas palustris CGA009 TX73_020235 efflux RND transporter permease subunit cofit 60 99
  Pseudomonas putida KT2440 PP_2818 Multidrug efflux RND transporter MexD strong 61 99
o Rhodospirillum rubrum S1H Rru_A1118 Hydrophobe/amphiphile efflux-1 HAE1 (NCBI) insig. 59 97
o Azospirillum brasilense Sp245 AZOBR_RS05000 acriflavine resistance protein B insig. 61 100
  Herbaspirillum seropedicae SmR1 HSERO_RS19775 acriflavine resistance protein B strong 60 99
  Rhodopseudomonas palustris CGA009 TX73_007700 multidrug efflux RND transporter permease subunit insig. 58 99
  Castellaniella sp019104865 MT123 ABCV34_RS04225 efflux RND transporter permease subunit cofit 59 98
  Pseudomonas aeruginosa PA14 IKLFDK_00520 multidrug efflux RND transporter permease subunit MexD insig. 61 99
  Pseudomonas aeruginosa PUPa3 DQ20_RS55905 mexD;inference=COORDINATES multidrug efflux RND transporter permease subunit MexD insig. 61 99
  Pseudomonas aeruginosa MRSN321 DY961_RS23440 mexD;inference=COORDINATES multidrug efflux RND transporter permease subunit MexD insig. 61 98
  Ralstonia solanacearum GMI1000 RS_RS18645 multidrug efflux RND transporter permease subunit insig. 61 97
o Variovorax sp. OAS795 ABID97_RS00325 efflux RND transporter permease subunit strong 59 97
o Variovorax sp. SCN45 GFF3725 RND efflux system, inner membrane transporter insig. 60 97
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS21905 hydrophobe/amphiphile efflux-1 family RND transporter insig. 60 99
  Cupriavidus basilensis FW507-4G11 RR42_RS20650 multidrug efflux RND transporter permease subunit strong 58 100
  Pseudomonas fluorescens SBW25 PFLU_RS15665 multidrug efflux RND transporter permease subunit insig. 58 100
  Pseudomonas fluorescens SBW25-INTG PFLU_RS15665 multidrug efflux RND transporter permease subunit insig. 58 100
  Azospirillum sp. SherDot2 MPMX19_05884 Multidrug efflux pump subunit AcrB insig. 56 100
o Acinetobacter baumannii LAC-4 RR41_RS13230 multidrug efflux RND transporter permease subunit AdeB insig. 56 97
  Pseudomonas sp. S08-1 OH686_16050 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) cofit 55 99
  Rhodopseudomonas palustris CGA009 TX73_014175 multidrug efflux RND transporter permease subunit insig. 57 100
  Azospirillum brasilense Sp245 AZOBR_RS30185 multidrug transporter insig. 55 99
o Klebsiella pneumoniae MKP103 KDGMDA_23785 multidrug efflux RND transporter permease subunit KexD insig. 56 99
  Pseudomonas sp. SVBP6 COO64_RS26275 efflux RND transporter permease subunit cofit 54 100
  Pseudomonas sp. RS175 PFR28_02080 Multidrug resistance protein MexB insig. 58 100
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2824 RND efflux system, inner membrane transporter CmeB strong 54 100
  Pseudomonas aeruginosa MRSN321 DY961_RS16280 mexY;inference=COORDINATES multidrug efflux RND transporter permease subunit MexY no data 55 100
  Pseudomonas aeruginosa PUPa3 DQ20_RS38600 mexY;inference=COORDINATES multidrug efflux RND transporter permease subunit MexY no data 55 100
  Ralstonia sp. UNC404CL21Col ABZR87_RS09795 efflux RND transporter permease subunit insig. 57 97
  Pseudomonas aeruginosa PA14 IKLFDK_09870 multidrug efflux RND transporter permease subunit MexY no data 55 100
  Pseudomonas fluorescens FW300-N2C3 AO356_04880 multidrug transporter strong 54 100
  Pantoea sp. MT58 IAI47_05310 multidrug efflux RND transporter permease AcrD insig. 54 98
  Pseudomonas sp. DMC3 GFF2212 Toluene efflux pump membrane transporter TtgB cofit 53 100
  Rahnella sp. WP5 EX31_RS22470 multidrug efflux RND transporter permease subunit cofit 54 97
  Pseudomonas fluorescens FW300-N2E3 AO353_17295 multidrug transporter strong 54 99
  Pseudomonas aeruginosa PA14 IKLFDK_23290 multidrug efflux RND transporter permease subunit MexB strong 54 99
  Pseudomonas aeruginosa PUPa3 DQ20_RS37190 mexB;inference=COORDINATES multidrug efflux RND transporter permease subunit MexB cofit 54 99
  Pseudomonas aeruginosa MRSN321 DY961_RS22115 mexB;inference=COORDINATES multidrug efflux RND transporter permease subunit MexB strong 54 99
  Pseudomonas sp. RS175 PFR28_00631 putative efflux pump membrane transporter TtgB strong 54 100
  Pseudomonas sp. BP01 JOY50_RS14445 ttgB multidrug efflux RND transporter permease subunit TtgB cofit 53 100
  Pseudomonas putida KT2440 PP_1385 Probable efflux pump membrane transporter TtgB strong 53 100
  Cupriavidus basilensis FW507-4G11 RR42_RS32420 multidrug efflux RND transporter permease subunit insig. 54 100
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS19855 multidrug efflux RND transporter permease AcrD cofit 54 98
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3246 RND efflux system, inner membrane transporter CmeB strong 53 99
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4581 RND efflux system, inner membrane transporter CmeB strong 53 100
  Pseudomonas segetis P6 ACVTMO_RS03400 efflux RND transporter permease subunit insig. 54 98
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4379 RND efflux system, inner membrane transporter CmeB sig. 54 97
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04170 multidrug efflux pump strong 53 100
  Paraburkholderia graminis OAS925 ABIE53_003408 multidrug efflux pump strong 54 98
  Pseudomonas stutzeri RCH2 Psest_0310 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family strong 54 99
  Erwinia amylovora T8 OLJFJH_10745 multidrug efflux RND transporter permease AcrD insig. 53 98
  Enterobacter sp. TBS_079 MPMX20_01064 Multidrug efflux pump subunit AcrB strong 54 97
  Enterobacter asburiae PDN3 EX28DRAFT_2496 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family cofit 54 97
  Paraburkholderia sabiae LMG 24235 QEN71_RS02525 efflux RND transporter permease subunit strong 53 99
  Desulfovibrio vulgaris Hildenborough JW710 DVU2816 multidrug resistance protein (TIGR) sig. 53 99
  Klebsiella pneumoniae MKP103 KDGMDA_06465 hydrophobe/amphiphile efflux-1 family RND transporter insig. 54 97
  Serratia liquefaciens MT49 IAI46_18690 multidrug efflux RND transporter permease AcrD insig. 53 98
  Escherichia coli BL21 ECD_00413 multidrug efflux system protein strong 54 97
  Escherichia fergusonii Becca EFB2_03596 Multidrug efflux pump subunit AcrB insig. 54 97
  Escherichia coli ECOR27 NOLOHH_01140 acrB efflux RND transporter permease AcrB insig. 54 97
  Escherichia coli ECOR38 HEPCGN_06820 acrB efflux RND transporter permease AcrB strong 54 97
  Escherichia coli ECRC62 BNILDI_22555 acrB efflux RND transporter permease AcrB insig. 54 97
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03212 Multidrug efflux pump subunit AcrB cofit 54 97
  Escherichia coli Nissle 1917 ECOLIN_RS02750 efflux RND transporter permease AcrB sig. 54 97
  Escherichia coli BW25113 b0462 acrB multidrug efflux system protein (NCBI) strong 54 97
  Escherichia coli ECRC100 OKFHMN_08205 acrB efflux RND transporter permease AcrB cofit 54 97
  Escherichia coli ECRC101 MCAODC_27430 acrB efflux RND transporter permease AcrB strong 54 97
  Escherichia coli ECRC102 NIAGMN_06260 acrB efflux RND transporter permease AcrB cofit 54 97
  Escherichia coli ECRC99 KEDOAH_19760 acrB efflux RND transporter permease AcrB no data 54 97
  Pectobacterium carotovorum WPP14 HER17_RS15740 multidrug efflux RND transporter permease subunit cofit 53 97
  Klebsiella pneumoniae MKP103 KDGMDA_27695 multidrug efflux RND transporter permease AcrD insig. 54 98