Homologs of PP_0901 from Pseudomonas putida KT2440

DNA-binding response regulator
SEED: DNA-binding response regulator ColR

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_0901 DNA-binding response regulator strong 100 100
o Pseudomonas syringae pv. syringae B728a Psyr_4070 Response regulator receiver:Transcriptional regulatory protein, C-terminal strong 97 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4070 Response regulator receiver:Transcriptional regulatory protein, C-terminal insig. 97 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_724 DNA-binding response regulator ColR strong 96 100
o Pseudomonas fluorescens FW300-N2C3 AO356_18415 XRE family transcriptional regulator strong 96 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5609 DNA-binding response regulator ColR strong 96 100
o Pseudomonas fluorescens SBW25 PFLU_RS24430 response regulator transcription factor insig. 96 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS24430 response regulator transcription factor sig. 96 100
o Pseudomonas simiae WCS417 PS417_22780 XRE family transcriptional regulator strong 96 100
o Pseudomonas sp. RS175 PFR28_03335 Transcriptional activator protein CzcR strong 95 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1767 DNA-binding response regulator ColR strong 95 100
o Pseudomonas fluorescens FW300-N2E3 AO353_04020 XRE family transcriptional regulator strong 95 100
o Pseudomonas sp. S08-1 OH686_17340 DNA-binding response regulator ColR insig. 87 100
o Pseudomonas stutzeri RCH2 Psest_3465 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain strong 79 98
o Lysobacter sp. OAE881 ABIE51_RS16515 response regulator transcription factor no data 58 100
o Rhodanobacter sp. FW510-T8 OKGIIK_11850 ompR DNA-binding response regulator no data 57 98
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS11615 response regulator transcription factor no data 57 98
o Rhodanobacter denitrificans MT42 LRK55_RS11745 response regulator transcription factor no data 57 98
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS12010 response regulator transcription factor strong 57 98
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1335.1 Two-component system regulatory protein no data 58 97
  Pseudomonas syringae pv. syringae B728a Psyr_3091 Response regulator receiver:Transcriptional regulatory protein, C-terminal insig. 56 99
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3091 Response regulator receiver:Transcriptional regulatory protein, C-terminal sig. 56 99
  Rhodanobacter sp. FW510-T8 OKGIIK_10950 ompR DNA-binding response regulator insig. 55 97
  Rhodanobacter denitrificans MT42 LRK55_RS03860 response regulator transcription factor cofit 55 97
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS04090 response regulator transcription factor sig. 55 97
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3867.1 Two-component system regulatory protein insig. 57 97
  Lysobacter sp. OAE881 ABIE51_RS05295 response regulator transcription factor strong 55 97
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4286.1 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain strong 54 97
o Kangiella aquimarina DSM 16071 B158DRAFT_0632 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain insig. 55 96
  Lysobacter sp. OAE881 ABIE51_RS08445 response regulator transcription factor insig. 57 98
  Rhodanobacter denitrificans MT42 LRK55_RS19100 response regulator transcription factor insig. 55 98
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09005 response regulator transcription factor insig. 55 98
  Rhodanobacter sp. FW510-T8 OKGIIK_06035 ompR DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain insig. 55 98
  Lysobacter sp. OAE881 ABIE51_RS03740 response regulator transcription factor cofit 49 97
  Rhodanobacter sp. FW510-T8 OKGIIK_11110 ompR DNA-binding response regulator strong 51 96
  Rhodanobacter denitrificans MT42 LRK55_RS04005 response regulator transcription factor strong 50 99
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS04235 response regulator transcription factor strong 50 99
  Pseudomonas fluorescens FW300-N2E3 AO353_15065 XRE family transcriptional regulator strong 50 97
  Lysobacter sp. OAE881 ABIE51_RS17870 response regulator transcription factor insig. 45 97
  Pseudomonas syringae pv. syringae B728a Psyr_2375 Response regulator receiver:Transcriptional regulatory protein, C-terminal insig. 48 97
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2375 Response regulator receiver:Transcriptional regulatory protein, C-terminal insig. 48 97
o Shewanella oneidensis MR-1 SO4623 DNA-binding response regulator (NCBI ptt file) insig. 46 97
  Shewanella oneidensis MR-1 SO4637 DNA-binding response regulator (NCBI ptt file) insig. 40 97
o Shewanella amazonensis SB2B Sama_0146 response regulator receiver protein (RefSeq) insig. 51 97
o Shewanella loihica PV-4 Shew_3317 two component transcriptional regulator (RefSeq) insig. 45 96
o Shewanella sp. ANA-3 Shewana3_4007 two component transcriptional regulator (RefSeq) insig. 44 100
  Pseudomonas fluorescens FW300-N2E3 AO353_15395 transcriptional regulator sig. 44 97
  Pseudomonas fluorescens FW300-N2C3 AO356_17205 transcriptional regulator insig. 43 99
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5366 DNA-binding heavy metal response regulator insig. 43 99
  Rhodanobacter denitrificans MT42 LRK55_RS17160 heavy metal response regulator transcription factor insig. 46 98
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS17690 heavy metal response regulator transcription factor insig. 46 98
  Pseudomonas sp. RS175 PFR28_03578 Transcriptional activator protein CzcR sig. 43 97
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3258 DNA-binding heavy metal response regulator insig. 45 98
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1663 DNA-binding heavy metal response regulator insig. 43 97
  Rhodanobacter denitrificans MT42 LRK55_RS17060 heavy metal response regulator transcription factor insig. 45 98
  Pseudomonas fluorescens SBW25 PFLU_RS04765 heavy metal response regulator transcription factor insig. 43 97
  Pseudomonas fluorescens SBW25-INTG PFLU_RS04765 heavy metal response regulator transcription factor insig. 43 97
  Lysobacter sp. OAE881 ABIE51_RS04165 response regulator transcription factor insig. 45 98
  Azospirillum sp. SherDot2 MPMX19_00794 Transcriptional activator protein CopR sig. 45 97
  Pseudomonas simiae WCS417 PS417_04690 transcriptional regulator strong 43 97
  Azospirillum brasilense Sp245 AZOBR_RS10800 XRE family transcriptional regulator sig. 44 97
  Pseudomonas syringae pv. syringae B728a Psyr_1127 Heavy metal response regulator insig. 43 97
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1127 Heavy metal response regulator insig. 43 97
  Burkholderia phytofirmans PsJN BPHYT_RS21805 transcriptional regulator insig. 45 97
  Variovorax sp. SCN45 GFF4042 Copper-sensing two-component system response regulator CusR insig. 44 97
o Alteromonas macleodii MIT1002 MIT1002_00641 Transcriptional regulatory protein QseB insig. 40 96
  Burkholderia phytofirmans PsJN BPHYT_RS25955 transcriptional regulator insig. 45 97
  Serratia liquefaciens MT49 IAI46_16745 heavy metal response regulator transcription factor insig. 44 97
  Variovorax sp. SCN45 GFF4069 DNA-binding heavy metal response regulator insig. 43 100
  Burkholderia phytofirmans PsJN BPHYT_RS07455 transcriptional regulator no data 43 98
  Variovorax sp. SCN45 GFF4686 Copper-sensing two-component system response regulator CusR insig. 42 98
  Magnetospirillum magneticum AMB-1 AMB_RS14570 DNA-binding response regulator no data 43 99
  Paraburkholderia graminis OAS925 ABIE53_005703 two-component system copper resistance phosphate regulon response regulator CusR sig. 43 97
  Herbaspirillum seropedicae SmR1 HSERO_RS12420 transcriptional regulator insig. 41 97
  Cupriavidus basilensis FW507-4G11 RR42_RS09165 transcriptional regulator insig. 42 98
  Herbaspirillum seropedicae SmR1 HSERO_RS15315 transcriptional regulator insig. 42 98
  Dechlorosoma suillum PS Dsui_2644 heavy metal response regulator cofit 43 97
  Cupriavidus basilensis FW507-4G11 RR42_RS30960 transcriptional regulator strong 43 98
  Variovorax sp. SCN45 GFF11 Two-component transcriptional response regulator, OmpR family insig. 46 99
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01441 two component heavy metal response transcriptional regulator, winged helix family insig. 42 97
  Pseudomonas syringae pv. syringae B728a Psyr_3374 Heavy metal response regulator insig. 44 96
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3374 Heavy metal response regulator insig. 44 96
  Rhizobium sp. OAE497 ABIE40_RS24970 winged helix-turn-helix domain-containing protein insig. 44 99
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3273 Putative two-component system response regulator YedW insig. 41 97
  Burkholderia phytofirmans PsJN BPHYT_RS29120 transcriptional regulator insig. 42 97
  Burkholderia phytofirmans PsJN BPHYT_RS24495 transcriptional regulator strong 41 98
  Pectobacterium carotovorum WPP14 HER17_RS13650 heavy metal response regulator transcription factor insig. 43 97
  Synechococcus elongatus PCC 7942 Synpcc7942_1404 two component transcriptional regulator, winged helix family no data 43 98
  Ralstonia solanacearum GMI1000 RS_RS19510 DNA-binding response regulator sig. 42 97
  Pseudomonas sp. S08-1 OH686_22680 Copper-sensing two-component system response regulator CusR strong 41 97
  Alteromonas macleodii MIT1002 MIT1002_03097 Transcriptional activator protein CopR insig. 38 98
  Enterobacter sp. TBS_079 MPMX20_03863 Transcriptional regulatory protein QseB insig. 43 98
  Marinobacter adhaerens HP15 HP15_3484 DNA-binding response regulator no data 40 98
  Variovorax sp. SCN45 GFF5812 DNA-binding heavy metal response regulator insig. 42 96
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1757 response regulator in two-component regulatory system with PhoQ cofit 44 97
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1102 DNA-binding heavy metal response regulator insig. 44 97
  Ralstonia solanacearum PSI07 RPSI07_RS01875 DNA-binding response regulator insig. 41 97
  Fusobacterium nucleatum SB010 HUW76_07205 response regulator transcription factor strong 39 98
  Enterobacter asburiae PDN3 EX28DRAFT_3057 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain insig. 43 98
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS21280 DNA-binding response regulator insig. 42 97