Homologs of MPMX26_02863 from Acinetobacter radioresistens SK82

RNA polymerase-associated protein RapA
SEED: COG0553: Superfamily II DNA/RNA helicases, SNF2 family

155 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Acinetobacter radioresistens SK82 MPMX26_02863 RNA polymerase-associated protein RapA insig. 100 100
o Escherichia coli ECRC100 OKFHMN_05760 zorD Zorya protein ZorD cofit 43 96
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3463.1 COG0553: Superfamily II DNA/RNA helicases, SNF2 family insig. 38 100
o Cupriavidus basilensis FW507-4G11 RR42_RS36870 helicase SNF2 insig. 38 94
  Vibrio cholerae E7946 ATCC 55056 CSW01_08835 helicase insig. 37 45
  Shewanella sp. ANA-3 Shewana3_3788 SNF2-related protein (RefSeq) cofit 37 44
  Cupriavidus basilensis FW507-4G11 RR42_RS08740 helicase insig. 35 46
  Synechococcus elongatus PCC 7942 Synpcc7942_0874 DEAD/DEAH box helicase-like strong 36 48
  Mycobacterium tuberculosis H37Rv Rv2101 Probable helicase HelZ insig. 36 44
  Rhizobium sp. OAE497 ABIE40_RS12300 DEAD/DEAH box helicase insig. 30 60
  Azospirillum sp. SherDot2 MPMX19_01520 hypothetical protein insig. 32 60
  Synechocystis sp000284455 PCC 6803 SGL_RS17180 DEAD/DEAH box helicase strong 36 45
  Pseudomonas segetis P6 ACVTMO_RS17730 DEAD/DEAH box helicase insig. 36 43
  Desulfovibrio vulgaris Hildenborough JW710 DVU2085 Snf2 family protein (TIGR) strong 34 46
  Rhodanobacter denitrificans MT42 LRK55_RS17115 DEAD/DEAH box helicase insig. 32 46
  Pseudomonas stutzeri RCH2 Psest_1651 Superfamily II DNA/RNA helicases, SNF2 family insig. 32 47
  Pseudomonas syringae pv. syringae B728a Psyr_1894 SNF2-related:Helicase, C-terminal:SWIM Zn-finger insig. 34 46
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1894 SNF2-related:Helicase, C-terminal:SWIM Zn-finger insig. 34 46
  Acidovorax sp. GW101-3H11 Ac3H11_2184 FIG00348557: hypothetical protein insig. 34 45
  Pseudomonas aeruginosa MRSN321 PFGADD_04335 ATP-dependent helicase sig. 32 53
  Pseudomonas aeruginosa PA14 IKLFDK_03460 helicase insig. 32 53
  Pseudomonas aeruginosa PUPa3 NPBIFN_04392 ATP-dependent helicase sig. 32 53
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3913 COG0553: Superfamily II DNA/RNA helicases, SNF2 family insig. 35 45
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09905 DEAD/DEAH box helicase insig. 33 47
  Pseudomonas sp. SVBP6 COO64_RS09450 DEAD/DEAH box helicase insig. 33 46
  Pseudomonas fluorescens FW300-N2C3 AO356_02280 helicase insig. 34 42
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS02670 DEAD/DEAH box helicase insig. 33 43
  Desulfovibrio vulgaris Miyazaki F DvMF_0789 Non-specific serine/threonine protein kinase (RefSeq) no data 33 46
  Pseudomonas fluorescens SBW25 PFLU_RS07700 DEAD/DEAH box helicase cofit 34 45
  Pseudomonas fluorescens SBW25-INTG PFLU_RS07700 DEAD/DEAH box helicase sig. 34 45
  Rhodanobacter sp. FW510-T8 OKGIIK_16155 Helicase SNF2 insig. 32 46
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS03655 DEAD/DEAH box helicase insig. 33 45
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS13245 DEAD/DEAH box helicase strong 32 45
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01657 hypothetical protein cofit 33 45
  Pseudomonas sp. RS175 PFR28_01121 hypothetical protein insig. 35 42
  Shewanella loihica PV-4 Shew_1892 SNF2-related protein (RefSeq) sig. 31 46
  Pseudomonas sp. BP01 JOY50_RS25090 DEAD/DEAH box helicase insig. 33 46
  Pseudomonas sp. FW215-L2 GFF5998 hypothetical protein no data 34 45
  Pseudomonas simiae WCS417 PS417_07625 helicase insig. 33 45
  Shewanella sp. ANA-3 Shewana3_2795 SNF2-related protein (RefSeq) strong 33 46
  Pseudomonas orientalis W4I3 QF045_RS10265 DEAD/DEAH box helicase cofit 34 45
  Rhodospirillum rubrum S1H Rru_A0208 SNF2 helicase-related protein (NCBI) insig. 34 46
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS10865 DEAD/DEAH box helicase strong 32 45
  Pseudomonas orientalis W4I3 QF045_RS10270 DEAD/DEAH box helicase cofit 33 45
  Rhodanobacter denitrificans MT42 LRK55_RS10555 DEAD/DEAH box helicase cofit 32 45
  Rhodanobacter sp. FW510-T8 OKGIIK_13010 hepA ATP-dependent helicase insig. 32 45
  Pseudomonas sp. DMC3 GFF1282 hypothetical protein insig. 33 46
  Herbaspirillum seropedicae SmR1 HSERO_RS22930 helicase insig. 33 45
  Fusobacterium nucleatum SB010 HUW76_08675 DEAD/DEAH box helicase family protein strong 33 46
  Fusobacterium nucleatum SB010 HUW76_05800 DEAD/DEAH box helicase cofit 31 46
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2280 COG0553: Superfamily II DNA/RNA helicases, SNF2 family strong 34 42
  Burkholderia phytofirmans PsJN BPHYT_RS24775 helicase insig. 32 45
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4029 COG0553: Superfamily II DNA/RNA helicases, SNF2 family insig. 34 42
  Pseudomonas protegens RBAN4 FABNJH_10225 ywqA ATP-dependent helicase YwqA insig. 34 42
  Shewanella oneidensis MR-1 SO1651 Snf2 family protein (NCBI ptt file) sig. 34 45
  Collimonas humicola GW821-FHT01A05 MPMX01_00185 hypothetical protein insig. 32 45
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17010 helicase SNF2 strong 32 47
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06540 Superfamily II DNA or RNA helicase, SNF2 family insig. 31 46
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_14040 helicase insig. 32 46
  Erwinia tracheiphila SCR3 LU632_RS20970 DEAD/DEAH box helicase cofit 32 46
  Paraburkholderia graminis OAS925 ABIE53_006198 superfamily II DNA or RNA helicase insig. 32 46
  Pseudomonas putida KT2440 PP_2146 helicase SNF2/RAD54 family insig. 34 45
  Pseudomonas sp. DMC3 GFF1283 hypothetical protein cofit 33 45
  Pseudomonas fluorescens FW300-N2E3 AO353_00445 helicase insig. 34 45
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1542 Superfamily II DNA/RNA helicases, SNF2 family strong 30 56
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3914 COG0553: Superfamily II DNA/RNA helicases, SNF2 family insig. 33 45
  Collimonas humicola GW821-FHT01A05 MPMX01_04340 hypothetical protein insig. 34 45
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0444 Superfamily II DNA/RNA helicases, SNF2 family insig. 31 46
  Acidovorax sp. GW101-3H11 Ac3H11_2870 COG0553: Superfamily II DNA/RNA helicases, SNF2 family insig. 32 43
  Cupriavidus basilensis FW507-4G11 RR42_RS03175 DNA helicase strong 32 49
  Erwinia amylovora T8 OLJFJH_07310 helicase insig. 31 46
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS22985 helicase SNF2 strong 31 49
  Bacteroides ovatus ATCC 8483 BACOVA_01961 SNF2 family N-terminal domain protein insig. 32 45
  Variovorax sp. OAS795 ABID97_RS21795 DEAD/DEAH box helicase cofit 33 42
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS02650 DNA helicase insig. 32 46
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS20105 DEAD/DEAH box helicase strong 32 45
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_08215 DNA helicase insig. 32 46
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS10950 DEAD/DEAH box helicase insig. 32 31
  Bifidobacterium breve UCC2003 BBR_RS17985 helicase strong 31 48
  Bacteroides thetaiotaomicron VPI-5482 BT3353 Snf2 family helicase (NCBI ptt file) sig. 30 41
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS17645 SNF2-related protein insig. 35 26
  Pseudomonas aeruginosa PA14 IKLFDK_01235 ATP-dependent helicase insig. 28 45
  Pseudomonas syringae pv. syringae B728a Psyr_1520 SNF2-related:Helicase, C-terminal insig. 30 46
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1520 SNF2-related:Helicase, C-terminal insig. 30 46
  Pseudomonas sp. FW215-L2 GFF4099 RNA polymerase-associated protein RapA insig. 29 45
  Bacteroides stercoris CC31F HMPREF1181_RS07090 DEAD/DEAH box helicase insig. 24 43
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.688.1 helicase (Snf2/Rad54 family) no data 24 21
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2845 RNA polymerase associated protein RapA (EC 3.6.1.-) strong 23 40
  Kangiella aquimarina DSM 16071 B158DRAFT_1267 Superfamily II DNA/RNA helicases, SNF2 family insig. 25 21
  Pseudomonas fluorescens FW300-N2C3 AO356_04975 RNA polymerase-associated protein RapA sig. 23 40
  Pseudomonas sp. S08-1 OH686_23015 hypothetical protein insig. 31 13
  Magnetospirillum magneticum AMB-1 AMB_RS04645 ATP-dependent helicase cofit 29 11
  Enterobacter sp. TBS_079 MPMX20_00753 RNA polymerase-associated protein RapA strong 21 46
  Klebsiella pneumoniae MKP103 KDGMDA_12795 RNA polymerase-associated protein RapA sig. 21 46
  Azospirillum brasilense Sp245 AZOBR_RS30290 RNA helicase insig. 28 13
  Sinorhizobium meliloti 1021 SMc02152 helicase insig. 32 10
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF183 RNA polymerase associated protein RapA (EC 3.6.1.-) cofit 20 46
  Enterobacter asburiae PDN3 EX28DRAFT_3651 Superfamily II DNA/RNA helicases, SNF2 family cofit 20 46
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS02520 DEAD/DEAH box helicase insig. 23 41
  Rhodopseudomonas palustris CGA009 TX73_011450 helicase-related protein insig. 29 13
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4599 RNA polymerase associated protein RapA (EC 3.6.1.-) sig. 22 40
  Marinobacter adhaerens HP15 HP15_3376 RNA polymerase-associated protein RapA strong 20 41
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3224 RNA polymerase associated protein RapA (EC 3.6.1.-) sig. 23 40
  Pseudomonas protegens RBAN4 FABNJH_06835 rapA RNA polymerase-associated protein RapA insig. 22 40
  Escherichia coli ECRC99 KEDOAH_16475 hepA helicase no data 21 39
  Kangiella aquimarina DSM 16071 B158DRAFT_1267 Superfamily II DNA/RNA helicases, SNF2 family insig. 29 12
  Enterobacter sp. TBS_079 MPMX20_00569 RNA polymerase-associated protein RapA insig. 25 25
  Escherichia coli ECRC100 OKFHMN_11670 hepA helicase cofit 21 39
  Escherichia coli ECRC101 MCAODC_02185 hepA helicase strong 21 39
  Escherichia coli ECRC102 NIAGMN_09520 hepA helicase cofit 21 39
  Escherichia coli ECRC62 BNILDI_09545 hepA helicase cofit 21 39
  Escherichia coli ECRC98 JDDGAC_15270 hepA helicase cofit 21 39
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS09245 RNA polymerase-associated protein RapA sig. 22 40
  Bacteroides ovatus ATCC 8483 BACOVA_05421 helicase C-terminal domain protein insig. 28 13
  Magnetospirillum magneticum AMB-1 AMB_RS04645 ATP-dependent helicase cofit 29 18
  Bacteroides ovatus ATCC 8483 BACOVA_05421 helicase C-terminal domain protein insig. 21 25
  Paraburkholderia sabiae LMG 24235 QEN71_RS00695 DEAD/DEAH box helicase cofit 24 14
  Alteromonas macleodii MIT1002 MIT1002_00659 RNA polymerase-associated protein RapA cofit 23 40
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.688.1 helicase (Snf2/Rad54 family) no data 27 10
  Acinetobacter radioresistens SK82 MPMX26_01027 RNA polymerase-associated protein RapA strong 23 51
  Pseudomonas sp. DMC3 GFF2193 RNA polymerase-associated protein RapA cofit 23 40
  Paraburkholderia graminis OAS925 ABIE53_003106 superfamily II DNA or RNA helicase insig. 29 13
  Pseudomonas segetis P6 ACVTMO_RS09785 SNF2-related protein insig. 28 12
  Pseudomonas aeruginosa PUPa3 NPBIFN_02318 helicase-related protein strong 28 12
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS01985 DISARM system SNF2-like helicase DrmD insig. 28 16
  Klebsiella pneumoniae MRSN742743 GJGHJB_04229 rapA RNA polymerase-associated protein RapA cofit 30 12
  Escherichia coli BL21 ECD_00061 RNA polymerase remodeling/recycling factor ATPase; RNA polymerase-associated, ATP-dependent RNA translocase strong 30 12
  Escherichia fergusonii Becca EFB2_03986 RNA polymerase-associated protein RapA insig. 30 12
  Escherichia coli ECOR27 NOLOHH_03145 rapA RNA polymerase-associated protein RapA strong 30 12
  Escherichia coli ECOR38 HEPCGN_08790 rapA RNA polymerase-associated protein RapA cofit 30 12
  Escherichia coli ECRC100 OKFHMN_10800 rapA RNA polymerase-associated protein RapA strong 30 12
  Escherichia coli ECRC101 MCAODC_01315 rapA RNA polymerase-associated protein RapA strong 30 12
  Escherichia coli ECRC102 NIAGMN_08650 rapA RNA polymerase-associated protein RapA strong 30 12
  Escherichia coli ECRC62 BNILDI_08460 rapA RNA polymerase-associated protein RapA cofit 30 12
  Escherichia coli ECRC98 JDDGAC_14395 rapA RNA polymerase-associated protein RapA strong 30 12
  Escherichia coli ECRC99 KEDOAH_17355 rapA RNA polymerase-associated protein RapA no data 30 12
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03599 RNA polymerase-associated protein RapA strong 30 12
  Escherichia coli Nissle 1917 ECOLIN_RS00315 RNA polymerase-associated protein RapA strong 30 12
  Escherichia coli BW25113 b0059 hepA ATP-dependent helicase HepA (NCBI) strong 30 12
  Shewanella loihica PV-4 Shew_0457 ATP-dependent helicase HepA (RefSeq) sig. 27 12
  Klebsiella michiganensis M5al BWI76_RS04570 RNA polymerase-associated protein RapA strong 30 12
  Shewanella amazonensis SB2B Sama_3131 ATP-dependent helicase HepA (RefSeq) sig. 27 20
  Shewanella sp. ANA-3 Shewana3_0574 ATP-dependent helicase HepA (RefSeq) sig. 26 12
  Shewanella oneidensis MR-1 SO0575 hepA RNA polymerase-associated protein HepA (NCBI ptt file) sig. 26 12
  Fusobacterium nucleatum SB010 HUW76_06360 DEAD/DEAH box helicase family protein cofit 23 18
  Vibrio cholerae E7946 ATCC 55056 CSW01_12705 RNA polymerase-associated protein RapA insig. 26 12
  Pseudomonas aeruginosa PUPa3 NPBIFN_02324 phospholipase D-like domain-containing anti-phage protein strong 26 20
  Enterobacter sp. TBS_079 MPMX20_00569 RNA polymerase-associated protein RapA insig. 28 13
  Erwinia amylovora T8 OLJFJH_01340 RNA polymerase-associated protein RapA strong 33 9
  Methanococcus maripaludis JJ MMJJ_RS07175 DEAD/DEAH box helicase cofit 28 12
  Pseudomonas aeruginosa MRSN321 PFGADD_02277 Helicase strong 23 23
  Pseudomonas aeruginosa MRSN321 PFGADD_02277 Helicase strong 23 13
  Acinetobacter baumannii LAC-4 RR41_RS05200 RNA polymerase-associated protein RapA insig. 28 13
  Sinorhizobium meliloti 1021 SMc02152 helicase insig. 40 6
  Rhodopseudomonas palustris CGA009 TX73_011450 helicase-related protein insig. 31 13