Homologs of MMP_RS04625 from Methanococcus maripaludis S2

DEAD/DEAH box helicase
SEED: Putative ski2-type helicase MJ1124
KEGG: helicase

153 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Methanococcus maripaludis S2 MMP_RS04625 DEAD/DEAH box helicase sig. 100 100
o Methanococcus maripaludis JJ MMJJ_RS00510 DEAD/DEAH box helicase insig. 96 100
  Dechlorosoma suillum PS Dsui_2108 superfamily II helicase insig. 26 60
  Methanococcus maripaludis S2 MMP_RS06605 DUF5814 domain-containing protein sig. 33 51
  Methanococcus maripaludis JJ MMJJ_RS07745 DUF5814 domain-containing protein sig. 33 51
  Paraburkholderia sabiae LMG 24235 QEN71_RS06925 DEAD/DEAH box helicase insig. 29 58
  Synechococcus elongatus PCC 7942 Synpcc7942_1324 DEAD/DEAH box helicase-like sig. 28 49
  Mycobacterium tuberculosis H37Rv Rv2092c ATP-dependent DNA helicase HelY insig. 24 57
  Acidovorax sp. GW101-3H11 Ac3H11_2668 FIG00464231: hypothetical protein insig. 27 49
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_908 FIG00464231: hypothetical protein insig. 26 49
  Bifidobacterium breve UCC2003 BBR_RS17335 DUF3516 domain-containing protein sig. 28 53
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04982 hypothetical protein cofit 26 59
  Synechocystis sp000284455 PCC 6803 SGL_RS18000 RNA helicase no data 37 22
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3506 FIG00464231: hypothetical protein insig. 27 50
  Bifidobacterium breve UCC2003 BBR_RS15735 Helicase helY insig. 33 23
  Mycobacterium tuberculosis H37Rv Rv3296 Probable ATP-dependent helicase Lhr (large helicase-related protein) insig. 27 41
  Methanococcus maripaludis S2 MMP_RS05890 ATP-dependent helicase insig. 25 56
  Methanococcus maripaludis JJ MMJJ_RS08465 ATP-dependent helicase insig. 25 56
  Pseudomonas sp. BP01 JOY50_RS14800 DEAD/DEAH box helicase insig. 23 42
  Sinorhizobium meliloti 1021 SMc02237 DNA damage response helicase, ligase-associated (from data) strong 25 41
  Pseudomonas sp. RS175 PFR28_03962 ATP-dependent RNA helicase SrmB insig. 23 64
  Pseudomonas stutzeri RCH2 Psest_2922 Lhr-like helicases insig. 25 47
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2634 Lhr-like helicases insig. 25 44
  Pseudomonas orientalis W4I3 QF045_RS27290 DEAD/DEAH box helicase insig. 24 57
  Pseudomonas fluorescens FW300-N2C3 AO356_14865 ATP-dependent DNA helicase insig. 23 57
  Pseudomonas sp. DMC3 GFF3810 ATP-dependent RNA helicase SrmB insig. 24 45
  Bosea sp. OAE506 ABIE41_RS24120 ligase-associated DNA damage response DEXH box helicase insig. 24 44
  Caulobacter crescentus NA1000 CCNA_02121 ATP-dependent helicase strong 24 41
  Caulobacter crescentus NA1000 Δfur CCNA_02121 ATP-dependent helicase cofit 24 41
  Escherichia coli ECRC100 OKFHMN_27420 lhr ATP-dependent helicase insig. 24 53
  Escherichia coli ECRC101 MCAODC_17990 lhr ATP-dependent helicase insig. 24 53
  Escherichia coli ECRC102 NIAGMN_00645 lhr ATP-dependent helicase cofit 24 53
  Escherichia coli ECRC99 KEDOAH_00690 lhr ATP-dependent helicase no data 24 53
  Rhizobium sp. OAE497 ABIE40_RS02475 ligase-associated DNA damage response DEXH box helicase insig. 25 41
  Pseudomonas putida KT2440 PP_1061 putative ATP-dependent DNA helicase lhr insig. 24 42
  Escherichia coli ECRC98 JDDGAC_02010 lhr ATP-dependent helicase insig. 24 53
  Pseudomonas fluorescens FW300-N2E3 AO353_06780 DNA repair helicase Lhr (from data) sig. 24 44
  Escherichia coli ECRC62 BNILDI_16730 lhr ATP-dependent helicase cofit 24 51
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4905 Lhr-like helicases insig. 23 57
  Escherichia coli BW25113 b1653 lhr predicted ATP-dependent helicase (NCBI) insig. 24 51
  Sphingobium sp. HT1-2 GFF4118 ATP-dependent helicase, DEAD/DEAH box family, associated with Flp pilus assembly cofit 22 56
  Escherichia coli BL21 ECD_01623 putative ATP-dependent helicase insig. 24 51
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02072 ATP-dependent RNA helicase SrmB insig. 24 51
  Escherichia coli ECOR38 HEPCGN_05805 lhr ATP-dependent helicase insig. 24 52
  Escherichia coli ECOR27 NOLOHH_17940 lhr ATP-dependent helicase insig. 24 51
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1299 Lhr-like helicases insig. 24 44
  Pseudomonas fluorescens SBW25 PFLU_RS06455 ligase-associated DNA damage response DEXH box helicase insig. 24 47
  Pseudomonas fluorescens SBW25-INTG PFLU_RS06455 ligase-associated DNA damage response DEXH box helicase insig. 24 47
  Herbaspirillum seropedicae SmR1 HSERO_RS11390 DEAD/DEAH box helicase insig. 23 47
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05170 DEAD-box ATP-dependent RNA helicase CshB cofit 24 42
  Bifidobacterium breve UCC2003 BBR_RS15735 Helicase helY insig. 37 12
  Synechocystis sp000284455 PCC 6803 SGL_RS18000 RNA helicase no data 34 17
  Rhodospirillum rubrum S1H Rru_A0511 DEAD/DEAH box helicase (NCBI) insig. 24 47
  Paraburkholderia graminis OAS925 ABIE53_004154 ATP-dependent Lhr-like helicase insig. 23 46
  Dinoroseobacter shibae DFL-12 Dshi_1119 DNA damage response helicase, ligase-associated (from data) strong 23 44
  Acidovorax sp. GW101-3H11 Ac3H11_4923 FIG003033: Helicase domain protein insig. 23 52
  Xanthobacter sp. DMC5 GFF3642 hypothetical protein insig. 22 42
  Azospirillum brasilense Sp245 AZOBR_RS09305 helicase insig. 22 53
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS20800 ligase-associated DNA damage response DEXH box helicase insig. 25 48
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS11475 ligase-associated DNA damage response DEXH box helicase insig. 22 41
  Desulfovibrio vulgaris Hildenborough JW710 DVU0256 ATP-dependent RNA helicase, DEAD/DEAH box family (TIGR) insig. 23 33
  Pseudomonas syringae pv. syringae B728a Psyr_5115 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal insig. 34 17
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_5115 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal insig. 34 17
  Methanococcus maripaludis S2 MMP_RS02620 DEAD/DEAH box helicase insig. 24 47
  Pseudomonas sp. SVBP6 COO64_RS16720 DEAD/DEAH box helicase insig. 23 42
  Pseudomonas fluorescens SBW25 PFLU_RS26960 DEAD/DEAH box helicase insig. 24 42
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26960 DEAD/DEAH box helicase insig. 24 42
  Azospirillum sp. SherDot2 MPMX19_01581 ATP-dependent RNA helicase DbpA insig. 23 42
  Agrobacterium fabrum C58 Atu0494 large atp-dependant helicase-related protein strong 22 41
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3657.1 FIG003033: Helicase domain protein insig. 23 41
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01448 ATP-dependent RNA helicase DbpA cofit 23 47
  Paraburkholderia sabiae LMG 24235 QEN71_RS30600 ligase-associated DNA damage response DEXH box helicase insig. 25 41
  Phaeobacter inhibens DSM 17395 PGA1_c06040 DNA damage response helicase, ligase-associated (from data) sig. 29 20
  Burkholderia phytofirmans PsJN BPHYT_RS22150 DEAD/DEAH box helicase insig. 23 46
  Pseudomonas aeruginosa PUPa3 DQ20_RS40500 DEAD/DEAH box helicase insig. 24 45
  Dickeya dadantii 3937 DDA3937_RS02020 DEAD/DEAH box helicase sig. 23 48
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03145 ATP-dependent helicase Lhr and Lhr-like helicase insig. 25 39
  Burkholderia phytofirmans PsJN BPHYT_RS27095 ATP-dependent DNA helicase insig. 23 44
  Paraburkholderia sabiae LMG 24235 QEN71_RS10885 DEAD/DEAH box helicase insig. 22 46
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02925 ATP dependent helicase, Lhr family insig. 22 44
  Pseudomonas aeruginosa MRSN321 DY961_RS00535 DEAD/DEAH box helicase insig. 24 45
  Paraburkholderia graminis OAS925 ABIE53_005864 ATP-dependent Lhr-like helicase strong 22 44
  Pseudomonas aeruginosa PA14 IKLFDK_16755 ATP-dependent DNA helicase insig. 24 45
  Variovorax sp. SCN45 GFF3698 ATP-dependent, 3'-5' DNA helicase with strand annealing activity insig. 23 39
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS14645 DNA repair helicase Lhr (from data) cofit 23 44
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1941 DNA damage response helicase, ligase-associated (from data) strong 23 53
  Pseudomonas sp. BP01 JOY50_RS24050 ligase-associated DNA damage response DEXH box helicase insig. 24 47
  Pseudomonas orientalis W4I3 QF045_RS09235 ligase-associated DNA damage response DEXH box helicase insig. 23 47
  Desulfovibrio vulgaris Miyazaki F DvMF_2198 DEAD/DEAH box helicase domain protein (RefSeq) insig. 26 24
  Cellulophaga baltica 18 M666_RS06760 ligase-associated DNA damage response DEXH box helicase insig. 32 20
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2235.1 Lhr-like helicases insig. 22 47
  Herbaspirillum seropedicae SmR1 HSERO_RS22135 DNA helicase cofit 23 48
  Klebsiella michiganensis M5al BWI76_RS21605 ATP-dependent helicase insig. 23 49
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS07665 DEAD/DEAH box helicase insig. 29 21
  Rhodopseudomonas palustris CGA009 TX73_004160 ligase-associated DNA damage response DEXH box helicase insig. 24 48
  Klebsiella pneumoniae MKP103 KDGMDA_00125 DEAD/DEAH box helicase insig. 23 49
  Rhodanobacter denitrificans MT42 LRK55_RS07400 DEAD/DEAH box helicase insig. 29 21
  Bifidobacterium breve UCC2003 BBR_RS16460 ATP-dependent helicase insig. 27 23
  Variovorax sp. SCN45 GFF1558 Uncharacterized ATP-dependent DNA helicase PA3272 insig. 22 47
  Pseudomonas fluorescens FW300-N2E3 AO353_24235 DEAD/DEAH box helicase insig. 28 22
  Xanthobacter sp. DMC5 GFF2700 hypothetical protein insig. 24 25
  Rhodanobacter sp. FW510-T8 OKGIIK_14210 ATP-dependent DNA helicase insig. 23 44
  Alteromonas macleodii MIT1002 MIT1002_03764 ATP-dependent helicase insig. 24 38
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS03955 DEAD/DEAH box helicase cofit 26 21
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS07935 helicase-related protein insig. 24 20
  Paraburkholderia sabiae LMG 24235 QEN71_RS21550 DEAD/DEAH box helicase insig. 26 22
  Pantoea sp. MT58 IAI47_18890 ATP-dependent helicase insig. 21 49
  Pseudomonas aeruginosa PA14 IKLFDK_13730 DEAD/DEAH box helicase insig. 28 22
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS09090 DNA ligase-associated DEXH box helicase strong 24 50
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.67.1 ATP-dependent RNA helicase insig. 28 21
  Serratia liquefaciens MT49 IAI46_19735 histidine kinase cofit 35 11
  Pseudomonas stutzeri RCH2 Psest_0914 Lhr-like helicases insig. 27 22
  Dickeya dianthicola 67-19 HGI48_RS14795 DEAD/DEAH box helicase insig. 32 14
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS07350 ATP-dependent helicase insig. 20 50
  Azospirillum sp. SherDot2 MPMX19_00976 ATP-dependent RNA helicase RhlE insig. 25 33
  Escherichia fergusonii Becca EFB2_01672 Putative DNA repair helicase RadD insig. 28 22
  Escherichia coli Nissle 1917 ECOLIN_RS12765 DEAD/DEAH box helicase insig. 28 22
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS14665 DEAD/DEAH box helicase no data 22 49
  Escherichia coli ECRC62 BNILDI_09555 yprA DEAD/DEAH box helicase cofit 28 22
  Xanthobacter sp. DMC5 GFF1839 ATP-dependent RNA helicase SrmB insig. 21 40
  Escherichia coli ECRC100 OKFHMN_11660 yprA DEAD/DEAH box helicase cofit 28 22
  Escherichia coli ECRC101 MCAODC_02175 yprA DEAD/DEAH box helicase strong 28 22
  Escherichia coli ECRC102 NIAGMN_09510 yprA DEAD/DEAH box helicase cofit 28 22
  Escherichia coli ECRC98 JDDGAC_15260 yprA DEAD/DEAH box helicase cofit 28 22
  Escherichia coli ECRC99 KEDOAH_16485 yprA DEAD/DEAH box helicase no data 28 22
  Pseudomonas syringae pv. syringae B728a Psyr_5115 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal insig. 26 18
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_5115 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal insig. 26 18
  Escherichia coli BL21 ECD_02114 putative ATP-dependent DNA or RNA helicase sig. 27 22
  Escherichia coli ECOR27 NOLOHH_14930 radD Putative DNA repair helicase RadD insig. 27 22
  Escherichia coli ECOR38 HEPCGN_22620 radD Putative DNA repair helicase RadD insig. 27 22
  Escherichia coli ECRC62 BNILDI_13850 radD Putative DNA repair helicase RadD insig. 27 22
  Escherichia coli BW25113 b2184 yejH DNA damage response helicase (yejH or radD) (from data) strong 27 22
  Escherichia coli ECRC100 OKFHMN_23355 radD Putative DNA repair helicase RadD cofit 27 22
  Escherichia coli ECRC101 MCAODC_14405 radD Putative DNA repair helicase RadD insig. 27 22
  Escherichia coli ECRC102 NIAGMN_21120 radD Putative DNA repair helicase RadD insig. 27 22
  Escherichia coli ECRC98 JDDGAC_27315 radD Putative DNA repair helicase RadD insig. 27 22
  Escherichia coli ECRC99 KEDOAH_04830 radD Putative DNA repair helicase RadD no data 27 22
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01525 Putative DNA repair helicase RadD insig. 27 22
  Azospirillum brasilense Sp245 AZOBR_RS17355 RNA helicase insig. 22 46
  Vibrio cholerae E7946 ATCC 55056 CSW01_08225 ATP-dependent helicase insig. 29 22
  Pantoea sp. MT58 IAI47_00500 ATP-dependent DNA helicase RecG strong 27 18
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS18845 ATP-dependent DNA helicase RecG cofit 27 18
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS00665 DEAD/DEAH box helicase cofit 25 22
  Pantoea sp. MT58 IAI47_06580 DEAD/DEAH box helicase insig. 25 22
  Magnetospirillum magneticum AMB-1 AMB_RS07010 ATP-dependent helicase strong 25 33
  Bacteroides ovatus ATCC 8483 BACOVA_00315 helicase C-terminal domain protein insig. 25 46
  Pseudomonas sp. SVBP6 COO64_RS09065 DEAD/DEAH box helicase insig. 22 50
  Methylophilus sp. DMC18 GFF1252 hypothetical protein insig. 21 48
  Pseudomonas fluorescens FW300-N2C3 AO356_00325 RNA helicase insig. 23 46
  Azospirillum brasilense Sp245 AZOBR_RS22205 DNA helicase strong 22 33
  Agrobacterium fabrum C58 Atu4171 cold-shock dead-box protein A strong 25 19
  Rahnella sp. WP5 EX31_RS19200 DEAD/DEAH box helicase insig. 24 22
  Enterobacter asburiae PDN3 EX28DRAFT_1816 transcription-repair coupling factor (mfd) cofit 27 18