Homologs of HSERO_RS21110 from Herbaspirillum seropedicae SmR1

dTDP-glucose 4,6-dehydratase
SEED: Nucleoside-diphosphate sugar epimerase/dehydratase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Herbaspirillum seropedicae SmR1 HSERO_RS21110 dTDP-glucose 4,6-dehydratase sig. 100 100
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1865 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) strong 63 97
o Ralstonia sp. UNC404CL21Col ABZR87_RS08730 nucleoside-diphosphate sugar epimerase/dehydratase strong 53 96
o Shewanella amazonensis SB2B Sama_2244 polysaccharide biosynthesis protein (RefSeq) strong 53 97
o Pseudomonas stutzeri RCH2 Psest_1825 Predicted nucleoside-diphosphate sugar epimerases strong 50 98
o Pseudomonas sp. S08-1 OH686_20915 nucleotide sugar epimerase/dehydratase WbpM strong 49 97
o Shewanella oneidensis MR-1 SO3171 polysaccharide biosynthesis protein (NCBI ptt file) strong 51 97
o Pseudomonas putida KT2440 PP_1805 Polysaccharide biosynthesis protein strong 49 97
o Pseudomonas fluorescens FW300-N2E3 AO353_01970 hypothetical protein strong 49 97
o Pseudomonas fluorescens FW300-N2C3 AO356_03345 hypothetical protein strong 50 98
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2191 nucleotide sugar epimerase/dehydratase WbpM strong 49 98
o Pseudomonas sp. RS175 PFR28_00932 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase strong 49 98
o Pseudomonas syringae pv. syringae B728a Psyr_3636 Polysaccharide biosynthesis protein CapD strong 49 98
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3636 Polysaccharide biosynthesis protein CapD cofit 49 98
o Variovorax sp. OAS795 ABID97_RS02200 nucleoside-diphosphate sugar epimerase/dehydratase strong 51 95
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2506 nucleotide sugar epimerase/dehydratase WbpM strong 49 98
o Pseudomonas simiae WCS417 PS417_08190 membrane protein strong 48 97
o Pseudomonas fluorescens SBW25 PFLU_RS08190 polysaccharide biosynthesis protein strong 48 96
o Pseudomonas fluorescens SBW25-INTG PFLU_RS08190 polysaccharide biosynthesis protein strong 48 96
o Enterobacter asburiae PDN3 EX28DRAFT_0519 Predicted nucleoside-diphosphate sugar epimerases cofit 48 97
o Cupriavidus basilensis FW507-4G11 RR42_RS15825 capsular biosynthesis protein strong 48 96
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_322 nucleotide sugar epimerase/dehydratase WbpM sig. 51 85
o Dickeya dadantii 3937 DDA3937_RS03410 polysaccharide biosynthesis protein strong 48 96
o Dickeya dianthicola ME23 DZA65_RS03625 polysaccharide biosynthesis protein strong 46 96
o Dickeya dianthicola 67-19 HGI48_RS03510 polysaccharide biosynthesis protein strong 46 96
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS19155 polysaccharide biosynthesis protein cofit 48 95
o Ralstonia solanacearum UW163 UW163_RS19975 polysaccharide biosynthesis protein sig. 48 95
o Vibrio cholerae E7946 ATCC 55056 CSW01_01350 polysaccharide biosynthesis protein strong 46 95
o Marinobacter adhaerens HP15 HP15_2383 nucleotide sugar epimerase/dehydratase strong 47 90
o Ralstonia solanacearum PSI07 RPSI07_RS04445 polysaccharide biosynthesis protein cofit 47 95
o Ralstonia solanacearum GMI1000 RS_RS21965 polysaccharide biosynthesis protein sig. 47 95
o Acinetobacter radioresistens SK82 MPMX26_00062 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase strong 47 90
o Dechlorosoma suillum PS Dsui_0400 putative nucleoside-diphosphate sugar epimerase strong 44 94
o Phaeobacter inhibens DSM 17395 PGA1_65p00170 putative capsular polysaccharide biosynthesis protein insig. 48 76
o Burkholderia phytofirmans PsJN BPHYT_RS04385 nucleoside-diphosphate sugar oxidoreductase strong 44 86
o Paraburkholderia graminis OAS925 ABIE53_001163 FlaA1/EpsC-like NDP-sugar epimerase strong 43 85
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04851 NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC strong 43 85
o Dinoroseobacter shibae DFL-12 Dshi_3857 polysaccharide biosynthesis protein CapD (RefSeq) strong 44 81
o Paraburkholderia sabiae LMG 24235 QEN71_RS25590 nucleoside-diphosphate sugar epimerase/dehydratase cofit 43 85
o Rhodanobacter sp. FW510-T8 OKGIIK_07240 flaA1 polysaccharide biosynthesis protein strong 39 94
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS18060 polysaccharide biosynthesis protein strong 39 94
o Rhodanobacter denitrificans MT42 LRK55_RS17915 nucleoside-diphosphate sugar epimerase/dehydratase strong 39 94
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS05540 nucleoside-diphosphate sugar epimerase/dehydratase strong 39 86
o Castellaniella sp019104865 MT123 ABCV34_RS13035 nucleoside-diphosphate sugar epimerase/dehydratase cofit 45 75
o Lysobacter sp. OAE881 ABIE51_RS09370 nucleoside-diphosphate sugar epimerase/dehydratase strong 39 93
o Acidovorax sp. GW101-3H11 Ac3H11_1539 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) cofit 42 87
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS12725 nucleoside-diphosphate sugar epimerase/dehydratase insig. 36 95
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2386.1 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) strong 38 92
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS01480 nucleoside-diphosphate sugar epimerase/dehydratase cofit 38 86
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS19185 polysaccharide biosynthesis protein strong 35 94
o Fusobacterium nucleatum SB010 HUW76_01325 polysaccharide biosynthesis protein strong 37 88
o Magnetospirillum magneticum AMB-1 AMB_RS00500 polysaccharide biosynthesis protein no data 39 86
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS08010 polysaccharide biosynthesis protein insig. 37 84
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0060 Predicted nucleoside-diphosphate sugar epimerases insig. 40 73
o Bacteroides ovatus ATCC 8483 BACOVA_03688 polysaccharide biosynthesis protein strong 37 86
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS08860 polysaccharide biosynthesis protein insig. 35 92
  Phocaeicola dorei CL03T12C01 ABI39_RS13770 polysaccharide biosynthesis protein insig. 39 79
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_12325 polysaccharide biosynthesis protein strong 37 89
o Azospirillum sp. SherDot2 MPMX19_01807 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase no data 37 92
o Bacteroides thetaiotaomicron VPI-5482 BT0378 capsular polysaccharide biosynthesis protein capD (NCBI ptt file) strong 35 92
  Bacteroides thetaiotaomicron VPI-5482 BT0598 putative nucleoside-diphosphate sugar epimerases/dehydrase (NCBI ptt file) strong 35 92
o Rhodospirillum rubrum S1H Rru_A3656 Polysaccharide biosynthesis protein CapD (NCBI) no data 36 97
o Sphingomonas koreensis DSMZ 15582 Ga0059261_4092 Predicted nucleoside-diphosphate sugar epimerases insig. 35 90
o Sinorhizobium meliloti 1021 SM_b21232 nucleotide sugar epimerase dehydratase insig. 35 92
  Caulobacter crescentus NA1000 CCNA_03316 UDP-N-acetylglucosamine 4,6-dehydratase/UDP-D-quinovosamine 4-dehydrogenase strong 41 72
  Caulobacter crescentus NA1000 Δfur CCNA_03316 UDP-N-acetylglucosamine 4,6-dehydratase/UDP-D-quinovosamine 4-dehydrogenase cofit 41 72
o Rhodopseudomonas palustris CGA009 TX73_020640 nucleoside-diphosphate sugar epimerase/dehydratase cofit 35 83
o Bosea sp. OAE506 ABIE41_RS03855 nucleoside-diphosphate sugar epimerase/dehydratase no data 34 91
  Azospirillum brasilense Sp245 AZOBR_RS33705 flagellin modification protein FlmA strong 36 44
  Azospirillum sp. SherDot2 MPMX19_06544 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) cofit 35 44
  Herbaspirillum seropedicae SmR1 HSERO_RS21095 UDP-glucose 4-epimerase cofit 36 43
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2611 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) insig. 35 44
  Shewanella sp. ANA-3 Shewana3_1302 polysaccharide biosynthesis protein (RefSeq) strong 33 44
  Shewanella oneidensis MR-1 SO3271 polysaccharide biosynthesis protein (NCBI ptt file) strong 33 44
  Magnetospirillum magneticum AMB-1 AMB_RS03675 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) cofit 33 45
  Pseudomonas fluorescens SBW25 PFLU_RS08145 NAD-dependent epimerase/dehydratase family protein cofit 35 43
  Pseudomonas fluorescens SBW25-INTG PFLU_RS08145 NAD-dependent epimerase/dehydratase family protein strong 35 43
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_07950 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) strong 34 44
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2186 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) strong 34 44
  Bacteroides thetaiotaomicron VPI-5482 BT0381 capsular polysaccharide biosynthesis protein capD (NCBI ptt file) sig. 34 43
  Caulobacter crescentus NA1000 CCNA_00233 UDP-N-acetylglucosamine 4,6-dehydratase strong 32 45
  Caulobacter crescentus NA1000 Δfur CCNA_00233 UDP-N-acetylglucosamine 4,6-dehydratase cofit 32 45
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3585 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) insig. 34 44
  Alteromonas macleodii MIT1002 MIT1002_01079 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) cofit 33 43
  Pseudomonas simiae WCS417 PS417_08165 UDP-glucose 4-epimerase strong 34 43
  Escherichia fergusonii Becca EFB2_01821 UDP-glucose 4-epimerase insig. 35 43
  Shewanella loihica PV-4 Shew_1318 polysaccharide biosynthesis protein CapD (RefSeq) strong 33 44
  Pseudomonas stutzeri RCH2 Psest_1810 UDP-N-acetylglucosamine 4,6-dehydratase strong 33 44
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS12770 polysaccharide biosynthesis protein strong 35 43
  Cupriavidus basilensis FW507-4G11 RR42_RS15810 UDP-N-acetylglucosamine 4,6-dehydratase insig. 33 44
  Pseudomonas sp. RS175 PFR28_00918 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) strong 30 48
  Ralstonia sp. UNC404CL21Col ABZR87_RS08690 polysaccharide biosynthesis protein strong 35 43
  Dechlorosoma suillum PS Dsui_0083 UDP-N-acetylglucosamine 4,6-dehydratase strong 31 42
  Rhodospirillum rubrum S1H Rru_A2741 Polysaccharide biosynthesis protein CapD (NCBI) insig. 35 42
  Marinobacter adhaerens HP15 HP15_2399 polysaccharide biosynthesis protein CapD no data 31 44
  Acidovorax sp. GW101-3H11 Ac3H11_1540 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) cofit 36 35
  Shewanella amazonensis SB2B Sama_2328 UDP-N-acetylglucosamine 4,6-dehydratase (RefSeq) strong 31 38
  Phocaeicola dorei CL03T12C01 ABI39_RS07780 polysaccharide biosynthesis protein insig. 27 42
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS12770 polysaccharide biosynthesis protein insig. 28 42
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_12465 NAD-dependent dehydratase strong 26 45