Homologs of HMPREF1058_RS03085 from Phocaeicola vulgatus CL09T03C04

ATP-dependent Clp endopeptidase proteolytic subunit ClpP
SEED: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)
KEGG: ATP-dependent Clp protease, protease subunit

Top 100 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS03085 ATP-dependent Clp endopeptidase proteolytic subunit ClpP sig. 100 100
o Phocaeicola dorei CL03T12C01 ABI39_RS02330 ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 100 100
o Bacteroides ovatus ATCC 8483 BACOVA_00335 endopeptidase Clp cofit 95 98
o Bacteroides thetaiotaomicron VPI-5482 BT3842 ATP-dependent Clp protease proteolytic subunit 2 (NCBI ptt file) no data 95 98
o Bacteroides stercoris CC31F HMPREF1181_RS07450 ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 95 98
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS17050 ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 78 98
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS06960 ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 69 96
o Cellulophaga baltica 18 M666_RS07970 ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 71 97
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS04270 ATP-dependent Clp protease proteolytic subunit no data 69 97
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_01410 ATP-dependent Clp protease proteolytic subunit strong 65 98
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4634 Protease subunit of ATP-dependent Clp proteases no data 64 98
o Synechocystis sp000284455 PCC 6803 SGL_RS16910 ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 56 85
o Acinetobacter radioresistens SK82 MPMX26_00408 ATP-dependent Clp protease proteolytic subunit strong 55 86
o Cupriavidus basilensis FW507-4G11 RR42_RS09020 Clp protease ClpP no data 55 88
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS01350 ATP-dependent Clp protease proteolytic subunit no data 54 89
o Ralstonia solanacearum GMI1000 RS_RS08645 ATP-dependent Clp protease proteolytic subunit no data 54 89
o Ralstonia solanacearum PSI07 RPSI07_RS16125 ATP-dependent Clp protease proteolytic subunit insig. 54 89
o Ralstonia solanacearum UW163 UW163_RS14660 ATP-dependent Clp protease proteolytic subunit no data 54 89
o Ralstonia sp. UNC404CL21Col ABZR87_RS12795 ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 53 88
  Synechococcus elongatus PCC 7942 Synpcc7942_2537 clpPIII ATP-dependent Clp protease proteolytic subunit no data 59 79
o Acidovorax sp. GW101-3H11 Ac3H11_935 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) no data 52 88
o Acinetobacter baumannii LAC-4 RR41_RS16565 ATP-dependent Clp endopeptidase proteolytic subunit ClpP sig. 54 86
  Synechocystis sp000284455 PCC 6803 SGL_RS16735 ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 53 86
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4042 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) strong 52 86
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3945 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) no data 51 89
o Pseudomonas lactucae CFBP13502 GEMAOFIL_03743 ATP-dependent Clp protease proteolytic subunit no data 51 89
o Alteromonas macleodii MIT1002 MIT1002_02760 ATP-dependent Clp protease proteolytic subunit precursor strong 52 86
  Synechococcus elongatus PCC 7942 Synpcc7942_2525 clpPII ATP-dependent Clp protease proteolytic subunit ClpP strong 53 87
o Pseudomonas stutzeri RCH2 Psest_2287 ATP-dependent Clp protease, proteolytic subunit ClpP no data 50 90
o Paraburkholderia sabiae LMG 24235 QEN71_RS21985 ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 52 86
o Pseudomonas sp. DMC3 GFF1443 ATP-dependent Clp protease proteolytic subunit cofit 51 89
o Dechlorosoma suillum PS Dsui_2196 ATP-dependent Clp protease, proteolytic subunit ClpP strong 56 86
o Herbaspirillum seropedicae SmR1 HSERO_RS12915 Clp protease proteolytic subunit ClpP no data 54 85
o Burkholderia phytofirmans PsJN BPHYT_RS09450 ATP-dependent Clp protease proteolytic subunit 2 no data 53 86
o Lysobacter sp. OAE881 ABIE51_RS14155 ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 52 86
o Pseudomonas fluorescens SBW25 PFLU_RS19170 ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 51 89
o Pseudomonas fluorescens SBW25-INTG PFLU_RS19170 ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 51 89
  Synechococcus elongatus PCC 7942 Synpcc7942_1554 clpP1 ATP-dependent Clp protease proteolytic subunit no data 52 85
o Castellaniella sp019104865 MT123 ABCV34_RS05135 ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 49 97
o Marinobacter adhaerens HP15 HP15_2185 ATP-dependent Clp protease, proteolytic subunit ClpP no data 52 86
o Pseudomonas simiae WCS417 PS417_17235 Clp protease ClpP no data 50 89
o Methylophilus sp. DMC18 GFF1303 ATP-dependent Clp protease proteolytic subunit no data 53 88
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00896 ATP-dependent Clp protease proteolytic subunit ClpP sig. 52 86
o Paraburkholderia graminis OAS925 ABIE53_002115 ATP-dependent Clp protease protease subunit strong 52 86
o Variovorax sp. OAS795 ABID97_RS17600 ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 52 85
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2552 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) strong 55 79
o Desulfovibrio vulgaris Hildenborough JW710 DVU1335 clpP ATP-dependent Clp protease, proteolytic subunit (TIGR) strong 52 86
o Variovorax sp. SCN45 GFF489 ATP-dependent Clp protease proteolytic subunit ClpP (EC 3.4.21.92) strong 52 85
o Kangiella aquimarina DSM 16071 B158DRAFT_1034 ATP-dependent Clp protease, proteolytic subunit ClpP strong 50 90
o Pseudomonas sp. SVBP6 COO64_RS19195 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP sig. 50 90
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_16440 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 50 86
o Enterobacter asburiae PDN3 EX28DRAFT_2534 ATP-dependent Clp endopeptidase, proteolytic subunit ClpP no data 50 86
o Enterobacter sp. TBS_079 MPMX20_01028 ATP-dependent Clp protease proteolytic subunit cofit 50 86
o Pantoea sp. MT58 IAI47_14655 ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 50 86
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS10540 ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 50 86
o Pseudomonas syringae pv. syringae B728a Psyr_1747 ATP-dependent Clp protease proteolytic subunit ClpP strong 49 88
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1747 ATP-dependent Clp protease proteolytic subunit ClpP sig. 49 88
o Pseudomonas putida KT2440 PP_2300 ATP-dependent Clp protease proteolytic subunit no data 51 90
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4048.1 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) no data 52 86
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS07330 ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 52 86
o Erwinia tracheiphila SCR3 LU632_RS18345 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 50 86
o Desulfovibrio vulgaris Miyazaki F DvMF_0110 ATP-dependent Clp protease, proteolytic subunit ClpP (RefSeq) insig. 53 85
o Shewanella loihica PV-4 Shew_2508 clpP ATP-dependent Clp protease proteolytic subunit (RefSeq) insig. 51 86
o Klebsiella michiganensis M5al BWI76_RS06525 ATP-dependent Clp protease proteolytic subunit strong 50 86
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4353 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) strong 50 86
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS12145 ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 51 86
o Shewanella oneidensis MR-1 SO1794 clpP ATP-dependent Clp protease, proteolytic subunit (NCBI ptt file) strong 51 87
o Dickeya dianthicola 67-19 HGI48_RS05685 ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 50 86
o Dickeya dianthicola ME23 DZA65_RS06010 ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 50 86
o Klebsiella pneumoniae MKP103 KDGMDA_14605 ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 50 86
o Serratia liquefaciens MT49 IAI46_05010 ATP-dependent Clp endopeptidase proteolytic subunit ClpP cofit 50 86
o Pseudomonas sp. RS175 PFR28_01228 ATP-dependent Clp protease proteolytic subunit no data 49 88
o Pseudomonas fluorescens FW300-N2C3 AO356_01750 ATP-dependent Clp protease proteolytic subunit strong 49 88
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2218 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) strong 49 88
o Escherichia coli BL21 ECD_00388 proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine proteases strong 50 86
o Escherichia fergusonii Becca EFB2_03620 ATP-dependent Clp protease proteolytic subunit sig. 50 86
o Escherichia coli ECOR27 NOLOHH_01270 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 50 86
o Escherichia coli ECOR38 HEPCGN_06950 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 50 86
o Escherichia coli ECRC100 OKFHMN_08335 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 50 86
o Escherichia coli ECRC101 MCAODC_27560 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP sig. 50 86
o Escherichia coli ECRC102 NIAGMN_06390 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 50 86
o Escherichia coli ECRC62 BNILDI_22685 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 50 86
o Escherichia coli ECRC98 JDDGAC_11990 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 50 86
o Escherichia coli ECRC99 KEDOAH_19630 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 50 86
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03236 ATP-dependent Clp protease proteolytic subunit strong 50 86
o Escherichia coli Nissle 1917 ECOLIN_RS02625 ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 50 86
o Escherichia coli BW25113 b0437 clpP ATP-dependent Clp protease proteolytic subunit (NCBI) strong 50 86
o Pseudomonas sp. BP01 JOY50_RS25915 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 50 90
o Magnetospirillum magneticum AMB-1 AMB_RS14045 ATP-dependent Clp endopeptidase, proteolytic subunit ClpP no data 50 87
o Rahnella sp. WP5 EX31_RS22245 ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 50 86
o Pseudomonas sp. S08-1 OH686_03645 ATP-dependent Clp endopeptidase, proteolytic subunit ClpP no data 52 90
o Dickeya dadantii 3937 DDA3937_RS05640 ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 50 86
o Rhodanobacter sp. FW510-T8 OKGIIK_08040 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 50 86
o Rhodanobacter denitrificans MT42 LRK55_RS16450 ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 51 86
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS16725 ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 51 86
o Azospirillum sp. SherDot2 MPMX19_01548 ATP-dependent Clp protease proteolytic subunit no data 51 87
o Erwinia amylovora T8 OLJFJH_17980 ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 50 86
o Azospirillum brasilense Sp245 AZOBR_RS07135 ATP-dependent Clp protease proteolytic subunit no data 50 87
o Shewanella sp. ANA-3 Shewana3_2661 clpP ATP-dependent Clp protease proteolytic subunit (RefSeq) strong 49 87
o Pseudomonas segetis P6 MPMX49_02261 ATP-dependent Clp protease proteolytic subunit no data 48 88