| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
|---|
| | Pseudomonas simiae WCS417 | PS417_03555 | | ATPase AAA | insig. | 100 | 100 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_00917 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 71 | 100 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS03605 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 72 | 95 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS03605 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 72 | 95 |
| o | Pseudomonas orientalis W4I3 | QF045_RS06535 | | sigma 54-interacting transcriptional regulator | sig. | 70 | 99 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4553 | | Nitrogen regulation protein NtrC | sig. | 60 | 94 |
| o | Pseudomonas syringae pv. syringae B728a | Psyr_1190 | | type III transcriptional regulator HrpR | strong | 57 | 99 |
| o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1190 | | type III transcriptional regulator HrpR | cofit | 57 | 99 |
| | Pectobacterium carotovorum WPP14 | HER17_RS10035 | | sigma 54-interacting transcriptional regulator | insig. | 56 | 93 |
| o | Erwinia amylovora T8 | OLJFJH_08150 | | AAA family ATPase | strong | 57 | 98 |
| o | Dickeya dadantii 3937 | DDA3937_RS11640 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 55 | 93 |
| o | Dickeya dianthicola ME23 | DZA65_RS12185 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 56 | 93 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_1191 | | type III transcriptional regulator HrpS | strong | 56 | 93 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1191 | | type III transcriptional regulator HrpS | cofit | 56 | 93 |
| o | Dickeya dianthicola 67-19 | HGI48_RS11700 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 56 | 93 |
| o | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_05650 | | AAA family ATPase | strong | 58 | 92 |
| o | Erwinia tracheiphila SCR3 | LU632_RS03200 | | sigma-54 dependent transcriptional regulator | strong | 58 | 92 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS16305 | | sigma-54 dependent transcriptional regulator | insig. | 47 | 93 |
| | Ralstonia solanacearum GMI1000 | RS_RS17240 | | sigma-54-dependent Fis family transcriptional regulator | sig. | 49 | 90 |
| | Pseudomonas sp. BP01 | JOY50_RS14825 | | sigma-54 dependent transcriptional regulator | insig. | 43 | 98 |
| | Azospirillum sp. SherDot2 | MPMX19_04512 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 45 | 94 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS23225 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 49 | 90 |
| | Ralstonia solanacearum UW163 | UW163_RS16475 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 49 | 90 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_776 | | Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake | insig. | 45 | 92 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS00045 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 48 | 90 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_16265 | | Fis family transcriptional regulator | strong | 44 | 92 |
| | Pseudomonas simiae WCS417 | PS417_05535 | | Fis family transcriptional regulator | strong | 43 | 92 |
| | Azospirillum sp. SherDot2 | MPMX19_04251 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 45 | 94 |
| | Pseudomonas sp. SVBP6 | COO64_RS16760 | | sigma-54 dependent transcriptional regulator | insig. | 44 | 92 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01294 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | strong | 44 | 92 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS05620 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 43 | 92 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS05620 | | sigma-54-dependent Fis family transcriptional regulator | strong | 43 | 92 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3913 | | Helix-turn-helix, Fis-type | insig. | 43 | 93 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3913 | | Helix-turn-helix, Fis-type | insig. | 43 | 93 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS01705 | | Fis family transcriptional regulator | insig. | 46 | 94 |
| | Pseudomonas putida KT2440 | PP_1066 | | C4-dicarboxylate transport transcriptional regulatory protein | strong | 42 | 98 |
| | Pseudomonas orientalis W4I3 | QF045_RS08460 | | sigma-54 dependent transcriptional regulator | cofit | 44 | 92 |
| | Dechlorosoma suillum PS | Dsui_3467 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | insig. | 46 | 94 |
| | Pseudomonas sp. RS175 | PFR28_03376 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | sig. | 45 | 92 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS16810 | | Fis family transcriptional regulator | strong | 43 | 92 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4775 | | Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake | strong | 44 | 92 |
| | Paraburkholderia graminis OAS925 | ABIE53_001852 | | two-component system C4-dicarboxylate transport response regulator DctD | strong | 42 | 99 |
| | Azospirillum brasilense Sp245 | AZOBR_RS21130 | | Fis family transcriptional regulator | insig. | 46 | 94 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_18205 | | Fis family transcriptional regulator | insig. | 44 | 92 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5565 | | Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake | insig. | 44 | 92 |
| | Ralstonia solanacearum GMI1000 | RS_RS01635 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 45 | 93 |
| | Pseudomonas sp. DMC3 | GFF5115 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 45 | 92 |
| | Rhodospirillum rubrum S1H | Rru_A1435 | | Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) | strong | 44 | 93 |
| | Agrobacterium fabrum C58 | Atu3296 | | two component response regulator for C4-dicarboxylate transport | strong | 43 | 94 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS10795 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 45 | 93 |
| | Ralstonia solanacearum UW163 | UW163_RS02785 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 45 | 93 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS22520 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 45 | 93 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS06635 | | sigma-54 dependent transcriptional regulator | strong | 44 | 93 |
| | Shewanella loihica PV-4 | Shew_1442 | | two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) | strong | 45 | 89 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS01375 | | sigma-54 dependent transcriptional regulator | strong | 45 | 93 |
| | Pseudomonas sp. S08-1 | OH686_13325 | | Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake | cofit | 45 | 91 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS37765 | | sigma-54 dependent transcriptional regulator | insig. | 42 | 96 |
| | Escherichia fergusonii Becca | EFB2_04538 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 46 | 90 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS23460 | | sigma-54 dependent transcriptional regulator | cofit | 46 | 90 |
| | Dechlorosoma suillum PS | Dsui_3486 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | cofit | 45 | 92 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02037 | | two component, sigma54 specific, transcriptional regulator, NtrC subfamily, Fis family | cofit | 45 | 94 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS02520 | | Fis family transcriptional regulator | strong | 44 | 98 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS14005 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 45 | 92 |
| | Paraburkholderia graminis OAS925 | ABIE53_000648 | | two-component system C4-dicarboxylate transport response regulator DctD | insig. | 44 | 98 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS19025 | | sigma-54 dependent transcriptional regulator | strong | 44 | 93 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_06350 | | Fis family transcriptional regulator | strong | 44 | 93 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS53150 | | sigma-54 dependent transcriptional regulator | strong | 44 | 93 |
| | Azospirillum sp. SherDot2 | MPMX19_03597 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 44 | 92 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS26060 | | Fis family transcriptional regulator | insig. | 45 | 89 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_09635 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 42 | 92 |
| | Shewanella amazonensis SB2B | Sama_2213 | | response regulator receiver protein (RefSeq) | strong | 43 | 91 |
| | Pseudomonas stutzeri RCH2 | Psest_4132 | | alpha-ketoglutarate DNA-binding response regulator (mifR) (from data) | strong | 46 | 90 |
| | Marinobacter adhaerens HP15 | HP15_725 | | two component, sigma54 specific, transcriptional regulator, Fis family | strong | 42 | 95 |
| | Xanthobacter sp. DMC5 | GFF2901 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 42 | 93 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS03980 | | Fis family transcriptional regulator | strong | 42 | 92 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1666 | | C4-dicarboxylate transport transcriptional regulatory protein | sig. | 43 | 92 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS11680 | dctD;inference=COORDINATES | two-component system response regulator DctD | strong | 44 | 91 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_27655 | | two-component system response regulator DctD | strong | 43 | 93 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS50420 | dctD;inference=COORDINATES | two-component system response regulator DctD | strong | 43 | 93 |
| | Pseudomonas segetis P6 | ACVTMO_RS21725 | | sigma-54-dependent transcriptional regulator | sig. | 42 | 92 |
| | Pseudomonas sp. SVBP6 | COO64_RS00595 | | sigma-54 dependent transcriptional regulator | insig. | 42 | 92 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS08380 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 44 | 93 |
| | Shewanella oneidensis MR-1 | SO3138 | dctD | C4-dicarboxylate transport transcriptional regulatory protein (NCBI ptt file) | insig. | 44 | 87 |
| | Shewanella sp. ANA-3 | Shewana3_1412 | | two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) | cofit | 44 | 87 |
| | Pseudomonas sp. DMC3 | GFF4159 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 43 | 92 |
| | Azospirillum brasilense Sp245 | AZOBR_RS30385 | | Fis family transcriptional regulator | insig. | 43 | 94 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_10065 | | Fis family transcriptional regulator | strong | 43 | 92 |
| | Xanthobacter sp. DMC5 | GFF3675 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | strong | 41 | 92 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS02725 | | sigma-54 dependent transcriptional regulator | insig. | 41 | 93 |
| | Pseudomonas simiae WCS417 | PS417_01305 | | Fis family transcriptional regulator | sig. | 43 | 92 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_401 | | C4-dicarboxylate transport transcriptional regulatory protein | strong | 42 | 92 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_00486 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | cofit | 43 | 92 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3883 | | C4-dicarboxylate transport transcriptional regulatory protein | strong | 43 | 92 |
| | Pseudomonas sp. RS175 | PFR28_04889 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | strong | 42 | 92 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_14720 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 41 | 97 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_0619 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | insig. | 42 | 96 |
| | Pseudomonas sp. S08-1 | OH686_14355 | | C4-dicarboxylate transport transcriptional regulatory protein | strong | 40 | 99 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS01400 | | sigma-54-dependent Fis family transcriptional regulator | strong | 42 | 92 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS01400 | | sigma-54-dependent Fis family transcriptional regulator | strong | 42 | 92 |
| | Pseudomonas sp. BP01 | JOY50_RS26420 | | sigma-54 dependent transcriptional regulator | insig. | 42 | 93 |
| | Pseudomonas segetis P6 | ACVTMO_RS01055 | | sigma-54-dependent transcriptional regulator | insig. | 45 | 91 |
| | Pseudomonas orientalis W4I3 | QF045_RS04425 | | sigma-54 dependent transcriptional regulator | cofit | 42 | 92 |
| | Rhizobium sp. OAE497 | ABIE40_RS26335 | | sigma-54 dependent transcriptional regulator | strong | 42 | 91 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01779 | | DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains | insig. | 41 | 93 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_11860 | | Fis family transcriptional regulator | strong | 41 | 92 |
| | Sinorhizobium meliloti 1021 | SM_b20613 | | C4-dicarboxylate transport transcriptional regulator | strong | 40 | 92 |
| | Pseudomonas putida KT2440 | PP_0263 | | C4-dicarboxylate transport transcriptional regulatory protein | strong | 42 | 92 |
| | Rhizobium sp. OAE497 | ABIE40_RS15425 | | sigma-54 dependent transcriptional regulator | strong | 40 | 92 |
| | Variovorax sp. OAS795 | ABID97_RS26605 | | sigma-54 dependent transcriptional regulator | insig. | 40 | 93 |
| | Azospirillum sp. SherDot2 | MPMX19_05978 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 41 | 93 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS30045 | | ATPase AAA | insig. | 41 | 92 |
| | Pseudomonas sp. DMC3 | GFF5041 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | cofit | 42 | 93 |
| | Variovorax sp. SCN45 | GFF1691 | | Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake | insig. | 41 | 93 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS22815 | | propionate catabolism operon regulatory protein PrpR | insig. | 38 | 95 |
| | Ralstonia solanacearum UW163 | UW163_RS23435 | | propionate catabolism operon regulatory protein PrpR | insig. | 38 | 95 |
| | Pseudomonas simiae WCS417 | PS417_22645 | | C4-dicarboxylate ABC transporter | sig. | 42 | 93 |
| | Pseudomonas putida KT2440 | PP_1401 | | C4-dicarboxylate transport transcriptional regulatory protein | strong | 43 | 91 |
| | Escherichia coli ECOR38 | HEPCGN_21015 | hyfR | DNA-binding transcriptional activator HyfR | insig. | 41 | 92 |
| | Escherichia coli BL21 | ECD_02147 | | fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein | insig. | 40 | 95 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01490 | | Regulatory protein AtoC | insig. | 40 | 95 |
| | Escherichia coli BW25113 | b2220 | atoC | fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein (NCBI) | insig. | 40 | 95 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS24280 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 42 | 93 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS24280 | | sigma-54-dependent Fis family transcriptional regulator | strong | 42 | 93 |
| | Escherichia coli BL21 | ECD_02383 | | hydrogenase-4 transcriptional activator | cofit | 41 | 92 |
| | Pseudomonas stutzeri RCH2 | Psest_4267 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | strong | 42 | 92 |
| | Pseudomonas sp. SVBP6 | COO64_RS26185 | | sigma-54 dependent transcriptional regulator | insig. | 42 | 93 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01235 | | DNA-binding transcriptional activator HyfR | cofit | 42 | 91 |
| | Escherichia coli ECRC100 | OKFHMN_21850 | hyfR | DNA-binding transcriptional regulator HyfR | insig. | 41 | 92 |
| | Escherichia coli ECRC101 | MCAODC_12380 | hyfR | DNA-binding transcriptional regulator HyfR | insig. | 41 | 92 |
| | Escherichia coli ECRC102 | NIAGMN_19620 | hyfR | DNA-binding transcriptional regulator HyfR | insig. | 41 | 92 |
| | Escherichia coli ECRC98 | JDDGAC_25795 | hyfR | DNA-binding transcriptional regulator HyfR | insig. | 41 | 92 |
| | Escherichia coli ECRC99 | KEDOAH_06370 | hyfR | DNA-binding transcriptional regulator HyfR | no data | 41 | 92 |
| | Escherichia coli BW25113 | b2491 | hyfR | putative 2-component regulator, interaction with sigma 54 (VIMSS) | sig. | 41 | 92 |
| | Escherichia coli ECOR27 | NOLOHH_13500 | | Fis family transcriptional regulator | insig. | 41 | 92 |
| | Ralstonia solanacearum GMI1000 | RS_RS17745 | | propionate catabolism operon regulatory protein PrpR | sig. | 45 | 77 |
| | Pseudomonas sp. BP01 | JOY50_RS14530 | | sigma-54 dependent transcriptional regulator | insig. | 43 | 90 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_1806 | | Nitrogen regulation protein NR(I) | strong | 42 | 93 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04682 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | cofit | 42 | 93 |
| | Escherichia coli ECOR38 | HEPCGN_22430 | atoC | acetoacetate metabolism transcriptional regulator AtoC | insig. | 40 | 95 |
| | Escherichia coli ECRC62 | BNILDI_12310 | hyfR | DNA-binding transcriptional regulator HyfR | insig. | 41 | 92 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_03805 | | C4-dicarboxylate ABC transporter | strong | 42 | 93 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS04415 | | sigma-54 dependent transcriptional regulator | cofit | 41 | 93 |
| | Escherichia fergusonii Becca | EFB2_01635 | | Regulatory protein AtoC | insig. | 40 | 95 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS12965 | | acetoacetate metabolism transcriptional regulator AtoC | no data | 40 | 95 |
| | Rhodospirillum rubrum S1H | Rru_A1388 | | Transcriptional Regulator, NifA subfamily, Fis Family (NCBI) | cofit | 40 | 92 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5487 | | Nitrogen regulation protein NR(I) | strong | 42 | 93 |
| | Dinoroseobacter shibae DFL-12 | Dshi_1196 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | strong | 41 | 93 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS31075 | | propionate catabolism operon regulatory protein PrpR | insig. | 40 | 94 |
| | Pseudomonas stutzeri RCH2 | Psest_0124 | | Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains | sig. | 43 | 89 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_17800 | | C4-dicarboxylate ABC transporter | strong | 42 | 93 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_4938 | | Helix-turn-helix, Fis-type | sig. | 42 | 92 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_4938 | | Helix-turn-helix, Fis-type | insig. | 42 | 92 |
| | Pseudomonas orientalis W4I3 | QF045_RS24815 | | sigma-54 dependent transcriptional regulator | insig. | 42 | 93 |
| | Shewanella loihica PV-4 | Shew_1364 | | two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) | strong | 40 | 92 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_02581 | | Sigma-54 interaction domain protein | insig. | 39 | 97 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2089 | | Sigma-54 dependent transcriptional regulator | insig. | 43 | 89 |
| | Pseudomonas sp. DMC3 | GFF451 | | Anaerobic nitric oxide reductase transcription regulator NorR | cofit | 42 | 89 |
| | Shewanella sp. ANA-3 | Shewana3_1340 | | two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) | strong | 39 | 99 |
| | Paraburkholderia graminis OAS925 | ABIE53_005903 | | propionate catabolism operon transcriptional regulator | strong | 50 | 68 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU0569 | flrA | sigma-54 dependent transcriptional regulator (TIGR) | sig. | 39 | 96 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_09410 | | Fis family transcriptional regulator | insig. | 42 | 89 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS16750 | | propionate catabolism operon regulatory protein PrpR | strong | 38 | 95 |
| | Agrobacterium fabrum C58 | Atu0114 | | two component response regulator | insig. | 40 | 91 |
| | Shewanella oneidensis MR-1 | SO3230 | flrC | flagellar regulatory protein C (NCBI ptt file) | cofit | 40 | 94 |
| | Pseudomonas sp. RS175 | PFR28_03462 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | strong | 41 | 93 |
| | Rhodospirillum rubrum S1H | Rru_A0540 | | Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) | insig. | 41 | 88 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_685 | | Nitrogen regulation protein NR(I) | no data | 41 | 93 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS05570 | | sigma-54 dependent transcriptional regulator | insig. | 39 | 92 |
| | Azospirillum brasilense Sp245 | AZOBR_RS29300 | | Fis family transcriptional regulator | insig. | 38 | 92 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT0856 | | two-component system response regulator (NCBI ptt file) | sig. | 38 | 92 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS00405 | | propionate catabolism operon regulatory protein PrpR | insig. | 38 | 95 |
| | Sinorhizobium meliloti 1021 | SM_b21200 | | two-component response regulator protein | insig. | 39 | 91 |
| | Shewanella amazonensis SB2B | Sama_2299 | | response regulator receiver protein (RefSeq) | sig. | 40 | 92 |
| | Rhodopseudomonas palustris CGA009 | TX73_007055 | | sigma-54-dependent Fis family transcriptional regulator | sig. | 38 | 92 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_11555 | | transcriptional regulator | no data | 48 | 72 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_25855 | | DNA-binding response regulator | sig. | 45 | 89 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS25855 | | sigma-54 dependent transcriptional regulator | strong | 45 | 89 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS58285 | | sigma-54 dependent transcriptional regulator | strong | 45 | 89 |
| | Pseudomonas sp. BP01 | JOY50_RS25235 | prpR | propionate catabolism operon regulatory protein PrpR | insig. | 39 | 94 |
| | Methylophilus sp. DMC18 | GFF1426 | | Transcriptional regulatory protein ZraR | insig. | 38 | 94 |
| | Pseudomonas segetis P6 | ACVTMO_RS00675 | | sigma-54 interaction domain-containing protein | insig. | 41 | 90 |
| | Rhodopseudomonas palustris CGA009 | TX73_007390 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 40 | 90 |
| | Pseudomonas sp. S08-1 | OH686_12810 | | T6SS sigma-54-dependent regulator VasH | insig. | 42 | 88 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02891 | | transcriptional regulator, propionate catabolism operon regulatory protein | sig. | 50 | 68 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS18190 | | sigma-54-dependent transcriptional regulator | insig. | 47 | 72 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS59425 | | sigma-54-dependent transcriptional regulator | insig. | 47 | 72 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS12970 | | PEP-CTERM-box response regulator transcription factor | insig. | 41 | 88 |
| | Bosea sp. OAE506 | ABIE41_RS10895 | | sigma-54 dependent transcriptional regulator | insig. | 40 | 96 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS02950 | | sigma-54 dependent transcriptional regulator | insig. | 39 | 92 |
| | Pseudomonas sp. BP01 | JOY50_RS05065 | sfnR | sigma54-dependent transcriptional activator SfnR | insig. | 47 | 68 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS03345 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 38 | 89 |
| | Azospirillum sp. SherDot2 | MPMX19_03130 | | Anaerobic nitric oxide reductase transcription regulator NorR | insig. | 42 | 93 |
| | Shewanella oneidensis MR-1 | SO4718 | | sigma-54 dependent response regulator (NCBI ptt file) | sig. | 40 | 93 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS16190 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 39 | 91 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_12160 | | Fis family transcriptional regulator | insig. | 41 | 88 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS13270 | | PEP-CTERM-box response regulator transcription factor | insig. | 41 | 88 |
| | Methylophilus sp. DMC18 | GFF1277 | | Regulatory protein AtoC | insig. | 39 | 89 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_2422 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | strong | 37 | 94 |
| | Marinobacter adhaerens HP15 | HP15_1891 | | two component, sigma54 specific, transcriptional regulator, Fis family | insig. | 39 | 89 |
| | Pseudomonas simiae WCS417 | PS417_15295 | | Fis family transcriptional regulator | insig. | 41 | 89 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS26850 | | ATPase AAA | strong | 50 | 68 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_10660 | | sigma-54-dependent Fis family transcriptional regulator | cofit | 43 | 74 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4304 | | Sigma-54 dependent transcriptional regulator | insig. | 43 | 88 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_1933 | | PAS modulated sigma54 specific transcriptional regulator, Fis family (RefSeq) | insig. | 40 | 93 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_16225 | | Fis family transcriptional regulator | insig. | 40 | 88 |
| | Variovorax sp. SCN45 | GFF3669 | | Two-component system response regulator protein | no data | 39 | 93 |
| | Xanthobacter sp. DMC5 | GFF4834 | | Regulatory protein AtoC | insig. | 39 | 89 |
| | Shewanella amazonensis SB2B | Sama_0125 | | response regulator receiver protein (RefSeq) | strong | 38 | 92 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_04200 | | Sigma-54 interaction domain protein | insig. | 37 | 91 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS05610 | | sigma-54-dependent Fis family transcriptional regulator | strong | 39 | 89 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS05610 | | sigma-54-dependent Fis family transcriptional regulator | strong | 39 | 89 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02112 | | Sigma54-dependent transcriptional activator SfnR | cofit | 48 | 68 |
| | Pseudomonas simiae WCS417 | PS417_09450 | | Fis family transcriptional regulator | insig. | 48 | 68 |
| | Methylophilus sp. DMC18 | GFF1988 | | Sigma54-dependent transcriptional activator SfnR | insig. | 46 | 71 |
| | Azospirillum brasilense Sp245 | AZOBR_RS26990 | | Fis family transcriptional regulator | insig. | 41 | 93 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS01040 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 40 | 89 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS25595 | | ATPase AAA | insig. | 39 | 89 |
| | Cellulophaga baltica 18 | M666_RS12540 | | sigma 54-interacting response regulator | insig. | 38 | 91 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS02570 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 38 | 97 |
| | Shewanella loihica PV-4 | Shew_2341 | | two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) | insig. | 47 | 70 |
| | Shewanella sp. ANA-3 | Shewana3_4076 | | two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) | cofit | 39 | 92 |
| | Dechlorosoma suillum PS | Dsui_1758 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | cofit | 45 | 74 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT0690 | | two-component system response regulator (NCBI ptt file) | insig. | 36 | 93 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU2359 | | sigma-54 dependent transcriptional regulator (TIGR) | insig. | 38 | 94 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS06965 | fleQ;inference=COORDINATES | transcriptional regulator FleQ | strong | 37 | 90 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_05045 | | transcriptional regulator FleQ | strong | 37 | 90 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS45870 | fleQ;inference=COORDINATES | transcriptional regulator FleQ | strong | 37 | 90 |
| | Marinobacter adhaerens HP15 | HP15_2330 | | two component, sigma54 specific, transcriptional regulator, Fis family | strong | 35 | 91 |
| | Alteromonas macleodii MIT1002 | MIT1002_03048 | | Transcriptional regulatory protein ZraR | insig. | 42 | 88 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3995 | | Helix-turn-helix, Fis-type | sig. | 41 | 89 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3995 | | Helix-turn-helix, Fis-type | insig. | 41 | 89 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS04750 | | Fis family transcriptional regulator | insig. | 47 | 68 |
| | Pseudomonas orientalis W4I3 | QF045_RS12080 | | sigma-54 dependent transcriptional regulator | cofit | 47 | 68 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_11530 | | Fis family transcriptional regulator | sig. | 43 | 72 |
| | Pseudomonas putida KT2440 | PP_2771 | | Sigma-54 dependent transcriptional regulator | insig. | 42 | 72 |
| | Pseudomonas sp. S08-1 | OH686_06630 | | T6SS sigma-54-dependent regulator VasH | insig. | 46 | 72 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS03545 | | sigma-54-dependent Fis family transcriptional regulator | strong | 37 | 93 |
| | Shewanella oneidensis MR-1 | SO3232 | flrA | flagellar regulatory protein A (NCBI ptt file) | strong | 35 | 92 |
| | Dechlorosoma suillum PS | Dsui_2360 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | cofit | 44 | 76 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_06328 | | transcriptional regulator, propionate catabolism operon regulatory protein | strong | 43 | 78 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0700 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | insig. | 38 | 94 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS17605 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 37 | 93 |
| | Pseudomonas simiae WCS417 | PS417_19825 | | ATPase AAA | strong | 36 | 93 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS21795 | | sigma-54-dependent Fis family transcriptional regulator | strong | 36 | 93 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS21795 | | sigma-54-dependent Fis family transcriptional regulator | strong | 36 | 93 |
| | Pseudomonas orientalis W4I3 | QF045_RS21955 | | sigma-54 dependent transcriptional regulator | cofit | 36 | 93 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS18165 | | sigma-54 dependent transcriptional regulator | sig. | 47 | 68 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS59400 | | sigma-54 dependent transcriptional regulator | insig. | 43 | 72 |
| | Xanthobacter sp. DMC5 | GFF2822 | | Anaerobic nitric oxide reductase transcription regulator NorR | insig. | 41 | 88 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS15305 | | PEP-CTERM-box response regulator transcription factor | insig. | 41 | 88 |