Homologs of GFF5440 from Variovorax sp. SCN45

RNA polymerase ECF-type sigma factor
SEED: Putative RNA polymerase sigma factor
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

229 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF5440 RNA polymerase ECF-type sigma factor insig. 100 100
o Variovorax sp. OAS795 ABID97_RS02030 RNA polymerase sigma-70 factor insig. 86 100
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF235 Putative RNA polymerase sigma factor insig. 70 98
o Burkholderia phytofirmans PsJN BPHYT_RS11635 RNA polymerase subunit sigma-24 insig. 66 98
o Paraburkholderia sabiae LMG 24235 QEN71_RS31540 RNA polymerase sigma-70 factor insig. 63 100
o Paraburkholderia graminis OAS925 ABIE53_004797 RNA polymerase sigma-70 factor (ECF subfamily) insig. 63 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01268 RNA polymerase sigma-70 factor, ECF subfamily insig. 65 98
o Lysobacter sp. OAE881 ABIE51_RS11095 RNA polymerase sigma-70 factor insig. 56 98
o Ralstonia sp. UNC404CL21Col ABZR87_RS05500 RNA polymerase sigma-70 factor strong 57 96
o Ralstonia solanacearum PSI07 RPSI07_RS23355 RNA polymerase sigma-70 factor insig. 59 96
o Acidovorax sp. GW101-3H11 Ac3H11_4965 RNA polymerase ECF-type sigma factor insig. 58 96
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS01610 RNA polymerase sigma-70 factor insig. 53 98
o Herbaspirillum seropedicae SmR1 HSERO_RS00750 RNA polymerase subunit sigma-24 insig. 51 98
  Lysobacter sp. OAE881 ABIE51_RS08425 RNA polymerase sigma-70 factor insig. 53 94
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS00750 RNA polymerase sigma factor SigJ insig. 51 99
o Rhodanobacter sp. FW510-T8 OKGIIK_03820 RNA polymerase sigma-70 factor, ECF subfamily insig. 48 100
o Rhodanobacter denitrificans MT42 LRK55_RS14775 RNA polymerase sigma factor SigJ insig. 47 100
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS15060 RNA polymerase sigma factor SigJ insig. 47 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4523 RNA polymerase sigma-70 factor, ECF subfamily insig. 43 97
o Pseudomonas fluorescens GW456-L13 PfGW456L13_3501 RNA polymerase sigma-70 factor, ECF subfamily insig. 40 99
o Caulobacter crescentus NA1000 CCNA_03375 RNA polymerase sigma-J factor strong 41 98
o Caulobacter crescentus NA1000 Δfur CCNA_03375 RNA polymerase sigma-J factor cofit 41 98
o Azospirillum sp. SherDot2 MPMX19_00243 ECF RNA polymerase sigma factor SigJ insig. 43 98
o Rhodopseudomonas palustris CGA009 TX73_005735 sigma-70 family RNA polymerase sigma factor insig. 42 96
o Phaeobacter inhibens DSM 17395 PGA1_c28920 'RNA polymerase sigma factor (sigma-70 family; ECF41 subgroup)' insig. 40 99
o Sphingobium sp. HT1-2 GFF1476 RNA polymerase ECF-type sigma factor insig. 40 96
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3435 RNA polymerase sigma factor, sigma-70 family insig. 39 97
o Sinorhizobium meliloti 1021 SM_b20030 RNA polymerase sigma factor SigJ insig. 38 95
  Paraburkholderia sabiae LMG 24235 QEN71_RS02865 sigma-70 family RNA polymerase sigma factor insig. 39 97
o Mycobacterium tuberculosis H37Rv Rv3328c Probable alternative RNA polymerase sigma factor (fragment) SigJ insig. 36 94
  Paraburkholderia graminis OAS925 ABIE53_003338 RNA polymerase sigma factor (sigma-70 family) sig. 42 69
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04104 RNA polymerase sigma-70 factor, ECF subfamily insig. 43 65
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2880 RNA polymerase sigma factor, sigma-70 family insig. 33 94
  Magnetospirillum magneticum AMB-1 AMB_RS17600 DNA-directed RNA polymerase specialized sigma subunit cofit 38 92
  Mycobacterium tuberculosis H37Rv Rv1189 Possible alternative RNA polymerase sigma factor SigI no data 31 96
  Burkholderia phytofirmans PsJN BPHYT_RS15835 RNA polymerase subunit sigma24 insig. 43 63
  Variovorax sp. SCN45 GFF6705 hypothetical protein insig. 45 51
  Acidovorax sp. GW101-3H11 Ac3H11_1193 RNA polymerase ECF-type sigma factor insig. 38 53
  Mycobacterium tuberculosis H37Rv Rv0182c Probable alternative RNA polymerase sigma factor SigG (RNA polymerase ECF type sigma factor) insig. 32 54
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS06415 RNA polymerase sigma factor insig. 30 53
  Azospirillum brasilense Sp245 AZOBR_RS30810 RNA polymerase sigma70 insig. 32 47
  Mycobacterium tuberculosis H37Rv Rv1221 Alternative RNA polymerase sigma factor SigE insig. 30 50
  Rhodospirillum rubrum S1H Rru_A2397 Sigma-24 (FecI) (NCBI) insig. 31 54
  Cellulophaga baltica 18 M666_RS04180 RNA polymerase sigma factor insig. 24 55
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4799.1 RNA polymerase sigma-70 factor, ECF subfamily insig. 31 58
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09420 RNA polymerase sigma factor sig. 30 50
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS19755 RNA polymerase sigma factor insig. 35 55
  Serratia liquefaciens MT49 IAI46_11745 sigma-70 family RNA polymerase sigma factor no data 30 53
  Pseudomonas sp. BP01 JOY50_RS15495 RNA polymerase sigma factor insig. 29 54
  Azospirillum brasilense Sp245 AZOBR_RS27315 RNA polymerase sigma 70 insig. 29 52
  Pseudomonas orientalis W4I3 QF045_RS00535 sigma-70 family RNA polymerase sigma factor cofit 42 21
  Pseudomonas putida KT2440 PP_4608 RNA polymerase sigma-70 factor, ECF subfamily insig. 29 53
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4220 RNA polymerase sigma factor RpoE insig. 30 57
  Pseudomonas aeruginosa MRSN321 DY961_RS27025 RNA polymerase sigma factor insig. 27 52
  Pseudomonas aeruginosa PA14 IKLFDK_24795 RNA polymerase sigma factor insig. 27 52
  Pseudomonas aeruginosa PUPa3 DQ20_RS31565 RNA polymerase sigma factor sig. 27 52
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS09175 RNA polymerase sigma factor sig. 27 52
  Pectobacterium carotovorum WPP14 HER17_RS18100 sigma-70 family RNA polymerase sigma factor cofit 28 51
  Pseudomonas sp. BP01 JOY50_RS01330 RNA polymerase sigma factor insig. 28 58
  Phocaeicola dorei CL03T12C01 ABI39_RS03560 RNA polymerase sigma factor insig. 26 52
  Phaeobacter inhibens DSM 17395 PGA1_c08510 RNA polymerase sigma factor (ECF01 subgroup, ECF20 subgroup) insig. 33 52
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3970 Predicted RNA polymerase sigma factor containing a TPR repeat domain insig. 32 56
  Pseudomonas fluorescens FW300-N2E3 AO353_04915 RNA polymerase subunit sigma-24 insig. 26 51
  Pseudomonas sp. DMC3 GFF1893 putative RNA polymerase sigma factor FecI insig. 27 55
  Pseudomonas fluorescens SBW25 PFLU_RS05190 RNA polymerase sigma factor insig. 26 51
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05190 RNA polymerase sigma factor insig. 26 51
  Azospirillum sp. SherDot2 MPMX19_03088 putative RNA polymerase sigma factor FecI insig. 28 52
  Lysobacter sp. OAE881 ABIE51_RS11085 sigma factor-like helix-turn-helix DNA-binding protein no data 38 25
  Herbaspirillum seropedicae SmR1 HSERO_RS12165 RNA polymerase sigma factor insig. 33 47
  Variovorax sp. SCN45 GFF2431 RNA polymerase ECF-type sigma factor insig. 29 52
  Pseudomonas sp. BP01 JOY50_RS12990 sigma-70 family RNA polymerase sigma factor insig. 28 53
  Kangiella aquimarina DSM 16071 B158DRAFT_0930 RNA polymerase sigma factor, sigma-70 family insig. 27 49
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3656 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 33 47
  Pseudomonas simiae WCS417 PS417_05120 RNA polymerase subunit sigma-24 insig. 25 51
  Azospirillum brasilense Sp245 AZOBR_RS23325 RNA polymerase sigma70 insig. 32 49
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01230 putative RNA polymerase sigma factor FecI insig. 25 54
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS10790 RNA polymerase sigma factor insig. 35 42
  Rhodopseudomonas palustris CGA009 TX73_005700 RNA polymerase sigma factor insig. 29 65
  Cellulophaga baltica 18 M666_RS18055 sigma-70 family RNA polymerase sigma factor insig. 26 51
  Azospirillum sp. SherDot2 MPMX19_03247 putative RNA polymerase sigma factor FecI insig. 31 47
  Pseudomonas simiae WCS417 PS417_00670 RNA polymerase sigma factor sig. 30 53
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4951 FIG006045: Sigma factor, ECF subfamily insig. 25 54
  Pseudomonas orientalis W4I3 QF045_RS08105 RNA polymerase sigma factor insig. 25 54
  Sphingobium sp. HT1-2 GFF5333 sigma factor cofit 33 43
  Pseudomonas orientalis W4I3 QF045_RS17270 sigma-70 family RNA polymerase sigma factor insig. 29 51
  Klebsiella pneumoniae MKP103 KDGMDA_00205 RNA polymerase sigma factor FecI insig. 28 52
  Sinorhizobium meliloti 1021 SMc04203 RNA polymerase sigma factor FECI protein insig. 27 53
  Rhodanobacter denitrificans MT42 LRK55_RS16655 RNA polymerase sigma factor RpoE no data 27 55
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS16940 RNA polymerase sigma factor RpoE strong 27 55
  Paraburkholderia graminis OAS925 ABIE53_002674 RNA polymerase sigma factor (sigma-70 family) insig. 30 53
  Pseudomonas putida KT2440 PP_4553 RNA polymerase sigma-70 factor, ECF subfamily insig. 28 58
  Bacteroides ovatus ATCC 8483 BACOVA_02727 RNA polymerase sigma-70 factor insig. 27 54
  Pseudomonas fluorescens SBW25 PFLU_RS16335 sigma-70 family RNA polymerase sigma factor insig. 34 30
  Pseudomonas fluorescens SBW25-INTG PFLU_RS16335 sigma-70 family RNA polymerase sigma factor insig. 34 30
  Rhodanobacter sp. FW510-T8 OKGIIK_07900 rpoE RNA polymerase sigma factor RpoE strong 27 55
  Escherichia coli ECOR38 HEPCGN_09830 fecI RNA polymerase sigma factor FecI insig. 27 51
  Variovorax sp. SCN45 GFF3935 RNA polymerase ECF-type sigma factor insig. 33 53
  Cupriavidus basilensis FW507-4G11 RR42_RS05810 RNA polymerase sigma factor insig. 31 52
  Castellaniella sp019104865 MT123 ABCV34_RS11175 sigma-70 family RNA polymerase sigma factor insig. 30 48
  Escherichia coli BL21 ECD_04159 RNA polymerase sigma-19 factor, fec operon-specific; ECF sigma factor insig. 28 52
  Escherichia coli Nissle 1917 ECOLIN_RS25750 RNA polymerase sigma factor FecI insig. 28 52
  Escherichia coli BW25113 b4293 fecI KpLE2 phage-like element; RNA polymerase, sigma 19 factor (NCBI) strong 28 52
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3601.1 RNA polymerase sigma-70 factor insig. 33 34
  Mycobacterium tuberculosis H37Rv Rv0735 Probable alternative RNA polymerase sigma factor SigL insig. 30 51
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_604 FIG006045: Sigma factor, ECF subfamily insig. 29 43
  Rhodopseudomonas palustris CGA009 TX73_003315 RNA polymerase sigma factor insig. 28 53
  Pseudomonas stutzeri RCH2 Psest_4133 RNA polymerase sigma factor, sigma-70 family sig. 28 53
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS11705 hypothetical protein insig. 26 47
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12885 RNA polymerase insig. 25 50
  Pseudomonas sp. SVBP6 COO64_RS11395 RNA polymerase sigma factor insig. 25 51
  Pseudomonas sp. S08-1 OH686_16765 RNA polymerase ECF-type sigma factor cofit 30 56
  Variovorax sp. OAS795 ABID97_RS28845 RNA polymerase sigma factor insig. 29 53
  Azospirillum sp. SherDot2 MPMX19_05214 ECF RNA polymerase sigma factor SigE insig. 28 52
  Pseudomonas sp. BP01 JOY50_RS01650 sigma-70 family RNA polymerase sigma factor insig. 27 51
  Shewanella amazonensis SB2B Sama_2611 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 25 53
  Rhodanobacter sp. FW510-T8 OKGIIK_05040 RNA polymerase subunit sigma insig. 33 45
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS00640 sigma-70 family RNA polymerase sigma factor cofit 30 53
  Sphingobium sp. HT1-2 GFF2715 sigma factor insig. 29 46
  Pseudomonas fluorescens FW300-N2C3 AO356_05230 RNA polymerase subunit sigma-24 insig. 28 43
  Agrobacterium fabrum C58 Atu3387 sigma factor insig. 28 49
  Pseudomonas stutzeri RCH2 Psest_3456 RNA polymerase sigma factor, sigma-70 family insig. 28 52
  Cellulophaga baltica 18 M666_RS00810 sigma-70 family RNA polymerase sigma factor insig. 27 53
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12435 hypothetical protein insig. 26 52
  Lysobacter sp. OAE881 ABIE51_RS14880 RNA polymerase sigma factor insig. 31 57
  Rhizobium sp. OAE497 ABIE40_RS20320 sigma-70 family RNA polymerase sigma factor insig. 30 51
  Pseudomonas aeruginosa MRSN321 DY961_RS19105 RNA polymerase sigma factor insig. 28 56
  Pseudomonas aeruginosa PUPa3 DQ20_RS53230 RNA polymerase sigma factor insig. 28 56
  Pseudomonas orientalis W4I3 QF045_RS24050 RNA polymerase sigma factor insig. 27 56
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS12005 RNA polymerase sigma factor RpoE no data 25 55
  Pseudomonas syringae pv. syringae B728a Psyr_1943 Sigma-70 region 2 strong 30 45
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1943 Sigma-70 region 2 sig. 30 45
  Pseudomonas sp. DMC3 GFF5258 hypothetical protein cofit 28 56
  Pseudomonas aeruginosa PA14 IKLFDK_06430 RNA polymerase subunit sigma-24 insig. 28 56
  Sphingobium sp. HT1-2 GFF5162 RNA polymerase, sigma-24 subunit, ECF subfamily insig. 26 50
  Shewanella sp. ANA-3 Shewana3_0763 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 22 53
  Cupriavidus basilensis FW507-4G11 RR42_RS31145 RNA polymerase sigma factor insig. 30 46
  Pseudomonas segetis P6 ACVTMO_RS06730 sigma-70 family RNA polymerase sigma factor insig. 25 53
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3399 RNA polymerase sigma-70 factor, ECF subfamily insig. 28 56
  Variovorax sp. SCN45 GFF4544 RNA polymerase sigma factor RpoE insig. 30 50
  Herbaspirillum seropedicae SmR1 HSERO_RS03905 RNA polymerase subunit sigma-24 insig. 26 54
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS01495 sigma-70 family RNA polymerase sigma factor insig. 35 43
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2900 FIG006045: Sigma factor, ECF subfamily insig. 27 43
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12095 RNA polymerase subunit sigma-70 insig. 32 51
  Variovorax sp. OAS795 ABID97_RS08675 RNA polymerase sigma factor insig. 32 53
  Pseudomonas fluorescens FW300-N2E3 AO353_03435 RNA polymerase subunit sigma-24 insig. 29 43
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS07180 RNA polymerase sigma factor RpoE strong 27 57
  Rhodospirillum rubrum S1H Rru_A0883 Sigma-24 (FecI) (NCBI) insig. 29 54
  Rhodopseudomonas palustris CGA009 TX73_002850 sigma-70 family RNA polymerase sigma factor insig. 30 46
  Pseudomonas sp. DMC3 GFF5154 hypothetical protein insig. 28 43
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1935 RNA polymerase sigma-70 factor, ECF subfamily insig. 28 56
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS12120 RNA polymerase sigma factor strong 27 51
  Cellulophaga baltica 18 M666_RS11420 RNA polymerase sigma factor insig. 26 51
  Rhodanobacter sp. FW510-T8 OKGIIK_09210 RNA polymerase subunit sigma-24 insig. 31 53
  Cupriavidus basilensis FW507-4G11 RR42_RS26775 RNA polymerase subunit sigma-24 insig. 29 51
  Magnetospirillum magneticum AMB-1 AMB_RS09285 RNA polymerase sigma factor no data 28 55
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_216 Sigma factor PvdS, controling pyoverdin biosynthesis insig. 28 47
  Pseudomonas sp. SVBP6 COO64_RS22035 RNA polymerase sigma factor insig. 28 58
  Bacteroides thetaiotaomicron VPI-5482 BT3037 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 26 51
  Bacteroides ovatus ATCC 8483 BACOVA_01909 Sigma-70 region 2 sig. 26 51
  Pseudomonas sp. BP01 JOY50_RS26335 sigma-70 family RNA polymerase sigma factor insig. 37 32
  Cupriavidus basilensis FW507-4G11 RR42_RS04015 RNA polymerase sigma factor insig. 34 42
  Pseudomonas simiae WCS417 PS417_11995 RNA polymerase sigma factor insig. 33 52
  Bosea sp. OAE506 ABIE41_RS09620 DUF6596 domain-containing protein insig. 28 41
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09435 RNA polymerase sigma factor insig. 26 54
  Ralstonia sp. UNC404CL21Col ABZR87_RS12845 sigma-70 family RNA polymerase sigma factor strong 33 43
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01538 RNA polymerase sigma-70 factor, ECF subfamily insig. 31 55
  Rhodospirillum rubrum S1H Rru_A1438 Sigma-24 (FecI) (NCBI) cofit 31 51
  Azospirillum sp. SherDot2 MPMX19_03082 ECF RNA polymerase sigma factor SigE insig. 29 47
  Herbaspirillum seropedicae SmR1 HSERO_RS11705 extracytoplasmic-function sigma-70 factor insig. 27 50
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.715.1 RNA polymerase sigma factor insig. 27 52
  Pseudomonas fluorescens FW300-N2E3 AO353_03200 RNA polymerase subunit sigma-24 insig. 27 53
  Phocaeicola dorei CL03T12C01 ABI39_RS04680 RNA polymerase sigma factor insig. 27 51
  Rahnella sp. WP5 EX31_RS16485 sigma-70 family RNA polymerase sigma factor insig. 25 49
  Shewanella oneidensis MR-1 SO3840 RNA polymerase sigma-70 factor, ECF subfamily (NCBI ptt file) insig. 24 53
  Rhodanobacter denitrificans MT42 LRK55_RS01915 RNA polymerase sigma factor cofit 30 53
  Pseudomonas sp. DMC3 GFF2767 putative RNA polymerase sigma factor FecI insig. 27 50
  Paraburkholderia sabiae LMG 24235 QEN71_RS16180 RNA polymerase sigma factor insig. 43 21
  Caulobacter crescentus NA1000 CCNA_01390 RNA polymerase sigma factor insig. 34 48
  Caulobacter crescentus NA1000 Δfur CCNA_01390 RNA polymerase sigma factor insig. 34 48
  Variovorax sp. SCN45 GFF2126 hypothetical protein no data 32 41
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS02165 RNA polymerase sigma factor insig. 30 53
  Azospirillum brasilense Sp245 AZOBR_RS29160 putative RNA polymerase sigma-70 factor ECF subfamily insig. 29 47
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0726 RNA polymerase sigma factor, sigma-70 family insig. 28 51
  Pseudomonas fluorescens FW300-N2C3 AO356_04270 RNA polymerase subunit sigma-24 insig. 28 50
  Pseudomonas fluorescens FW300-N2E3 AO353_07625 RNA polymerase subunit sigma-70 insig. 34 21
  Pseudomonas sp. BP01 JOY50_RS26985 sigma-70 family RNA polymerase sigma factor insig. 32 36
  Sinorhizobium meliloti 1021 SMc01150 hypothetical protein insig. 30 54
  Rhodospirillum rubrum S1H Rru_A2372 Sigma-24 (FecI) (NCBI) insig. 30 48
  Pseudomonas fluorescens FW300-N2E3 AO353_19345 RNA polymerase subunit sigma-70 insig. 28 47
  Pseudomonas aeruginosa MRSN321 DY961_RS28585 sigma-70 family RNA polymerase sigma factor insig. 28 55
  Pseudomonas aeruginosa PA14 IKLFDK_09340 RNA polymerase subunit sigma no data 28 55
  Pseudomonas aeruginosa PUPa3 DQ20_RS38070 sigma-70 family RNA polymerase sigma factor no data 28 55
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS05915 sigma-70 family RNA polymerase sigma factor insig. 28 51
  Bosea sp. OAE506 ABIE41_RS04095 sigma-70 family RNA polymerase sigma factor strong 27 51
  Marinobacter adhaerens HP15 HP15_342 RNA polymerase sigma factor SigE insig. 25 55
  Kangiella aquimarina DSM 16071 B158DRAFT_2027 RNA polymerase sigma factor, sigma-70 family insig. 24 51
  Pseudomonas sp. DMC3 GFF1392 ECF RNA polymerase sigma factor SigK cofit 31 39
  Pseudomonas aeruginosa MRSN321 DY961_RS00460 RNA polymerase sigma factor insig. 30 50
  Pseudomonas aeruginosa PUPa3 DQ20_RS40570 RNA polymerase sigma factor insig. 30 50
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF454 RNA polymerase sigma-70 factor, ECF subfamily insig. 29 54
  Castellaniella sp019104865 MT123 ABCV34_RS07155 RNA polymerase sigma factor insig. 28 53
  Variovorax sp. SCN45 GFF5862 KEGG: RNA polymerase sigma-70 factor, ECF subfamily insig. 27 46
  Pseudomonas sp. BP01 JOY50_RS12920 RNA polymerase sigma factor insig. 27 52
  Pseudomonas simiae WCS417 PS417_22700 RNA polymerase subunit sigma-24 strong 26 43
  Burkholderia phytofirmans PsJN BPHYT_RS24975 RNA polymerase sigma24 factor strong 32 50
  Pseudomonas stutzeri RCH2 Psest_0650 RNA polymerase sigma factor, sigma-70 family insig. 30 56
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS04270 DNA-directed RNA polymerase sigma-70 factor insig. 30 44
  Ralstonia solanacearum UW163 UW163_RS09400 DNA-directed RNA polymerase sigma-70 factor insig. 30 44
  Pseudomonas aeruginosa PA14 IKLFDK_16830 RNA polymerase subunit sigma-24 insig. 29 50
  Rahnella sp. WP5 EX31_RS18905 sigma-70 family RNA polymerase sigma factor insig. 28 49
  Herbaspirillum seropedicae SmR1 HSERO_RS09625 RNA polymerase sigma factor RpoE no data 28 53
  Pseudomonas putida KT2440 PP_0704 RNA polymerase sigma-70 factor, ECF subfamily strong 28 49
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1886 FIG006045: Sigma factor, ECF subfamily insig. 26 43
  Synechococcus elongatus PCC 7942 Synpcc7942_1923 sigG RNA polymerase sigma factor RpoE strong 26 52
  Variovorax sp. OAS795 ABID97_RS24815 sigma-70 family RNA polymerase sigma factor insig. 30 47
  Bacteroides thetaiotaomicron VPI-5482 BT3396 RNA polymerase ECF-type sigma factor (NCBI ptt file) strong 25 51
  Kangiella aquimarina DSM 16071 B158DRAFT_0015 RNA polymerase sigma factor, sigma-70 family insig. 28 49
  Paraburkholderia graminis OAS925 ABIE53_005146 RNA polymerase sigma factor (sigma-70 family) sig. 30 53
  Rhizobium sp. OAE497 ABIE40_RS13680 RNA polymerase sigma factor insig. 28 58
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS18950 sigma-70 family RNA polymerase sigma factor insig. 27 53
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02732 RNA polymerase sigma-70 factor, ECF subfamily insig. 30 50
  Bacteroides stercoris CC31F HMPREF1181_RS02545 sigma-70 family RNA polymerase sigma factor insig. 27 51
  Pseudomonas sp. S08-1 OH686_05515 RNA polymerase sigma factor RpoE cofit 27 50
  Bosea sp. OAE506 ABIE41_RS07610 sigma-70 family RNA polymerase sigma factor insig. 25 53
  Caulobacter crescentus NA1000 CCNA_00393 RNA polymerase sigma factor insig. 30 40
  Caulobacter crescentus NA1000 Δfur CCNA_00393 RNA polymerase sigma factor cofit 30 40
  Pseudomonas segetis P6 ACVTMO_RS03680 sigma-70 family RNA polymerase sigma factor insig. 28 54
  Pseudomonas sp. BP01 JOY50_RS11380 RNA polymerase sigma factor insig. 25 45
  Pseudomonas putida KT2440 PP_1008 RNA polymerase subunit sigma-24 strong 25 45