Homologs of GFF4681 from Sphingobium sp. HT1-2

D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)
SEED: D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)
KEGG: D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF4681 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) cofit 100 100
o Sphingomonas koreensis DSMZ 15582 Ga0059261_1299 D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family insig. 56 94
o Pseudomonas lactucae CFBP13502 GEMAOFIL_01208 D-alanyl-D-alanine carboxypeptidase DacC cofit 31 89
o Pseudomonas fluorescens SBW25 PFLU_RS05075 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase insig. 32 84
o Pseudomonas fluorescens SBW25-INTG PFLU_RS05075 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase insig. 32 84
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS00485 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase insig. 32 89
o Pseudomonas simiae WCS417 PS417_05005 penicillin-binding protein insig. 32 81
o Phocaeicola dorei CL03T12C01 ABI39_RS05970 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase insig. 27 94
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS11060 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase insig. 27 94
o Synechocystis sp000284455 PCC 6803 SGL_RS14350 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase cofit 25 86
o Synechococcus elongatus PCC 7942 Synpcc7942_1934 dacB D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase strong 27 95
o Erwinia amylovora T8 OLJFJH_07180 serine-type D-Ala-D-Ala carboxypeptidase cofit 27 90
o Dickeya dadantii 3937 DDA3937_RS03010 serine-type D-Ala-D-Ala carboxypeptidase insig. 27 85
o Dickeya dianthicola ME23 DZA65_RS03175 serine-type D-Ala-D-Ala carboxypeptidase insig. 28 85
o Enterobacter asburiae PDN3 EX28DRAFT_3234 D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family insig. 28 93
o Klebsiella pneumoniae MKP103 KDGMDA_05980 serine-type D-Ala-D-Ala carboxypeptidase insig. 28 93
o Dickeya dianthicola 67-19 HGI48_RS03180 serine-type D-Ala-D-Ala carboxypeptidase insig. 28 85
o Pectobacterium carotovorum WPP14 HER17_RS18335 serine-type D-Ala-D-Ala carboxypeptidase insig. 27 87
o Escherichia fergusonii Becca EFB2_00641 D-alanyl-D-alanine carboxypeptidase DacB insig. 27 87
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2924 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) insig. 27 87
o Escherichia coli BL21 ECD_03047 D-alanyl-D-alanine carboxypeptidase insig. 27 87
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00518 D-alanyl-D-alanine carboxypeptidase DacB insig. 27 87
o Enterobacter sp. TBS_079 MPMX20_04086 D-alanyl-D-alanine carboxypeptidase DacB insig. 27 87
o Pantoea sp. MT58 IAI47_17085 serine-type D-Ala-D-Ala carboxypeptidase insig. 27 87
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS09180 serine-type D-Ala-D-Ala carboxypeptidase cofit 26 87
o Escherichia coli ECOR38 HEPCGN_16915 dacB serine-type D-Ala-D-Ala carboxypeptidase insig. 27 87
o Escherichia coli BW25113 b3182 dacB D-alanyl-D-alanine carboxypeptidase (NCBI) strong 27 87
o Escherichia coli ECOR27 NOLOHH_09840 dacB serine-type D-Ala-D-Ala carboxypeptidase insig. 27 87
o Klebsiella michiganensis M5al BWI76_RS25165 serine-type D-Ala-D-Ala carboxypeptidase sig. 28 93
o Escherichia coli ECRC62 BNILDI_01695 dacB serine-type D-Ala-D-Ala carboxypeptidase insig. 27 87
o Bacteroides stercoris CC31F HMPREF1181_RS01785 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase insig. 27 97
o Escherichia coli Nissle 1917 ECOLIN_RS18325 serine-type D-Ala-D-Ala carboxypeptidase insig. 27 87
o Escherichia coli ECRC100 OKFHMN_18040 dacB serine-type D-Ala-D-Ala carboxypeptidase cofit 27 87
o Escherichia coli ECRC101 MCAODC_08560 dacB serine-type D-Ala-D-Ala carboxypeptidase insig. 27 87
o Escherichia coli ECRC102 NIAGMN_15800 dacB serine-type D-Ala-D-Ala carboxypeptidase insig. 27 87
o Escherichia coli ECRC98 JDDGAC_21665 dacB serine-type D-Ala-D-Ala carboxypeptidase insig. 27 87
o Escherichia coli ECRC99 KEDOAH_10110 dacB serine-type D-Ala-D-Ala carboxypeptidase no data 27 87
o Bacteroides thetaiotaomicron VPI-5482 BT3187 penicillin-binding protein, D-alanyl-D-alanine carboxypeptidase (NCBI ptt file) sig. 27 94
o Erwinia tracheiphila SCR3 LU632_RS21170 dacB serine-type D-Ala-D-Ala carboxypeptidase insig. 27 85
o Rahnella sp. WP5 EX31_RS08600 serine-type D-Ala-D-Ala carboxypeptidase insig. 27 73
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_13860 dacB serine-type D-Ala-D-Ala carboxypeptidase insig. 27 85
o Serratia liquefaciens MT49 IAI46_01875 serine-type D-Ala-D-Ala carboxypeptidase cofit 28 68
o Bacteroides ovatus ATCC 8483 BACOVA_02892 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase insig. 26 94
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS11650 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase insig. 25 87
  Synechocystis sp000284455 PCC 6803 SGL_RS09795 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase strong 35 43
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3731 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) insig. 25 94
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS17360 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase cofit 26 87
o Shewanella oneidensis MR-1 SO2394 dacB penicillin-binding protein 4 (NCBI ptt file) insig. 25 90
  Pseudomonas fluorescens FW300-N2C3 AO356_02595 D-alanyl-D-alanine carboxypeptidase strong 33 39
  Pseudomonas sp. RS175 PFR28_01057 D-alanyl-D-alanine carboxypeptidase DacC sig. 28 57
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2344 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) strong 33 39
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3846 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) strong 30 39
  Pseudomonas sp. DMC3 GFF5256 D-alanyl-D-alanine carboxypeptidase DacC cofit 30 39
  Pseudomonas fluorescens FW300-N2E3 AO353_00765 D-alanyl-D-alanine carboxypeptidase sig. 31 39
  Pseudomonas syringae pv. syringae B728a Psyr_2111 Peptidase S13, D-Ala-D-Ala carboxypeptidase C insig. 28 63
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2111 Peptidase S13, D-Ala-D-Ala carboxypeptidase C strong 28 63
  Shewanella sp. ANA-3 Shewana3_1985 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase (RefSeq) insig. 26 83
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4091 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) cofit 29 39
  Shewanella loihica PV-4 Shew_1962 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase (RefSeq) insig. 24 84
  Pseudomonas simiae WCS417 PS417_20920 D-alanyl-D-alanine carboxypeptidase insig. 29 39
o Herbaspirillum seropedicae SmR1 HSERO_RS16870 D-alanyl-D-alanine carboxypeptidase insig. 26 92
  Pseudomonas fluorescens SBW25 PFLU_RS22535 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase strong 29 39
  Pseudomonas fluorescens SBW25-INTG PFLU_RS22535 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase strong 29 39
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04329 hypothetical protein cofit 29 39
  Pseudomonas sp. S08-1 OH686_03105 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase cofit 31 39
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS15410 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase insig. 22 99
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2231 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) insig. 24 94
o Methylophilus sp. DMC18 GFF2555 D-alanyl-D-alanine carboxypeptidase DacB insig. 25 83
  Pseudomonas segetis P6 MPMX49_03024 D-alanyl-D-alanine carboxypeptidase DacC cofit 27 49
  Pseudomonas aeruginosa PA14 IKLFDK_15505 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase insig. 30 39
  Pseudomonas sp. SVBP6 COO64_RS05285 dacB D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase insig. 29 38
  Pseudomonas putida KT2440 PP_2098 D-alanyl-D-alanine carboxypeptidase sig. 28 38
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS21540 peptidase S13 insig. 25 84
  Pseudomonas sp. BP01 JOY50_RS22085 dacB D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase insig. 28 38
o Vibrio cholerae E7946 ATCC 55056 CSW01_03320 serine-type D-Ala-D-Ala carboxypeptidase insig. 24 87
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04935 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) insig. 28 64
  Ralstonia solanacearum PSI07 RPSI07_RS21110 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase insig. 30 38
  Pseudomonas stutzeri RCH2 Psest_1950 D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family sig. 29 39
  Ralstonia sp. UNC404CL21Col ABZR87_RS08110 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase strong 29 35
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS18750 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase insig. 25 90
  Burkholderia phytofirmans PsJN BPHYT_RS16225 D-alanyl-D-alanine carboxypeptidase sig. 25 84
o Cellulophaga baltica 18 M666_RS10815 D-alanyl-D-alanine carboxypeptidase insig. 23 85
  Dechlorosoma suillum PS Dsui_0294 D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family cofit 25 80
  Shewanella amazonensis SB2B Sama_1744 Serine-type D-Ala-D-Ala carboxypeptidase (RefSeq) insig. 23 64
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_08695 peptidase S13 cofit 26 84
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS12220 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase insig. 30 38
  Ralstonia solanacearum UW163 UW163_RS01390 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase insig. 30 38
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04181 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) sig. 25 84
  Paraburkholderia sabiae LMG 24235 QEN71_RS02470 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase cofit 32 23
  Castellaniella sp019104865 MT123 ABCV34_RS15375 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase cofit 30 33
  Ralstonia solanacearum GMI1000 RS_RS02925 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase insig. 31 32
  Paraburkholderia graminis OAS925 ABIE53_003419 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) strong 24 84
  Variovorax sp. OAS795 ABID97_RS13040 D-alanyl-D-alanine carboxypeptidase insig. 32 45
  Cupriavidus basilensis FW507-4G11 RR42_RS03245 D-alanyl-D-alanine carboxypeptidase sig. 32 33
  Marinobacter adhaerens HP15 HP15_829 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase insig. 24 52
  Variovorax sp. OAS795 ABID97_RS01685 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase insig. 34 35
  Mycobacterium tuberculosis H37Rv Rv3627c Conserved protein no data 32 35
o Variovorax sp. SCN45 GFF5516 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) insig. 26 92
  Synechocystis sp000284455 PCC 6803 SGL_RS10615 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase strong 30 35
  Burkholderia phytofirmans PsJN BPHYT_RS30880 peptidase S13 insig. 26 46