Homologs of PS417_23760 from Pseudomonas simiae WCS417

DeoR faimly transcriptional regulator
SEED: Inner membrane protein YfiN

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas simiae WCS417 PS417_23760 DeoR faimly transcriptional regulator sig. 100 100
o Pseudomonas fluorescens SBW25 PFLU_RS25575 diguanylate cyclase insig. 94 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS25575 diguanylate cyclase sig. 94 100
o Pseudomonas fluorescens FW300-N2E3 AO353_06010 diguanylate cyclase insig. 80 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1232 Inner membrane protein YfiN insig. 79 99
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3456 Inner membrane protein YfiN sig. 80 99
o Pseudomonas sp. RS175 PFR28_00010 Diguanylate cyclase DgcN sig. 77 99
o Pseudomonas fluorescens FW300-N2C3 AO356_07900 diguanylate cyclase insig. 79 99
o Pseudomonas putida KT2440 PP_4670 diguanylate cyclase sig. 68 99
o Serratia liquefaciens MT49 IAI46_02975 diguanylate cyclase insig. 60 95
o Cupriavidus basilensis FW507-4G11 RR42_RS22840 DeoR family transcriptional regulator insig. 53 96
o Rahnella sp. WP5 EX31_RS04230 diguanylate cyclase insig. 44 94
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3400 diguanylate cyclase (GGDEF) domain insig. 43 93
o Dickeya dianthicola 67-19 HGI48_RS16615 diguanylate cyclase insig. 37 93
o Dickeya dianthicola ME23 DZA65_RS17705 diguanylate cyclase insig. 37 93
o Escherichia fergusonii Becca EFB2_01288 Diguanylate cyclase DgcN insig. 38 93
o Escherichia coli ECRC62 BNILDI_11680 dgcN diguanylate cyclase DgcN insig. 38 93
o Escherichia coli BW25113 b2604 yfiN predicted diguanylate cyclase (NCBI) insig. 38 93
o Dickeya dadantii 3937 DDA3937_RS16545 diguanylate cyclase insig. 37 93
o Escherichia coli ECOR27 NOLOHH_12875 dgcN diguanylate cyclase DgcN cofit 38 93
o Escherichia coli BL21 ECD_02493 putative membrane-anchored diguanylate cyclase cofit 38 93
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01102 Diguanylate cyclase DgcN insig. 38 93
o Escherichia coli Nissle 1917 ECOLIN_RS14720 diguanylate cyclase DgcN insig. 38 93
o Escherichia coli ECRC101 OKFHMN_21200 dgcN diguanylate cyclase DgcN insig. 38 93
o Escherichia coli ECRC101 MCAODC_11730 dgcN diguanylate cyclase DgcN insig. 38 93
o Escherichia coli ECRC102 NIAGMN_18970 dgcN diguanylate cyclase DgcN insig. 38 93
o Escherichia coli ECRC98 JDDGAC_24865 dgcN diguanylate cyclase DgcN no data 38 93
o Escherichia coli ECRC99 KEDOAH_07020 dgcN diguanylate cyclase DgcN no data 38 93
o Enterobacter sp. TBS_079 MPMX20_03472 Diguanylate cyclase DgcN insig. 36 93
o Enterobacter asburiae PDN3 EX28DRAFT_2705 diguanylate cyclase (GGDEF) domain insig. 37 93
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4174 Inner membrane protein YfiN insig. 39 89
o Klebsiella michiganensis M5al BWI76_RS21490 GGDEF domain-containing protein cofit 37 93
o Escherichia coli ECOR38 HEPCGN_20320 dgcN diguanylate cyclase DgcN cofit 39 81
o Pantoea sp. MT58 IAI47_20475 diguanylate cyclase insig. 34 85
  Paraburkholderia graminis OAS925 ABIE53_005160 diguanylate cyclase (GGDEF)-like protein strong 35 87
  Burkholderia phytofirmans PsJN BPHYT_RS29510 deoxyuridine 5`-triphosphate nucleotidohydrolase insig. 40 62
  Dechlorosoma suillum PS Dsui_1824 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 51 41
  Pseudomonas putida KT2440 PP_0386 Sensory box protein sig. 50 40
  Pseudomonas sp. S08-1 OH686_14965 Sensory box/GGDEF family protein cofit 49 40
  Pseudomonas sp. RS175 PFR28_04079 Membrane-bound lytic murein transglycosylase F insig. 48 42
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2512 sensory box/GGDEF domain/EAL domain protein insig. 47 42
  Pseudomonas fluorescens FW300-N2E3 AO353_07390 diguanylate cyclase insig. 47 42
  Pseudomonas fluorescens FW300-N2C3 AO356_14260 diguanylate cyclase insig. 48 42
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4790 sensory box/GGDEF domain/EAL domain protein sig. 48 42
  Lysobacter sp. OAE881 ABIE51_RS17335 EAL domain-containing protein insig. 43 48
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1185 sensory box/GGDEF domain/EAL domain protein insig. 47 42
  Magnetospirillum magneticum AMB-1 AMB_RS18310 bifunctional diguanylate cyclase/phosphodiesterase cofit 47 38
  Pseudomonas fluorescens SBW25 PFLU_RS27540 bifunctional diguanylate cyclase/phosphodiesterase insig. 47 42
  Pseudomonas fluorescens SBW25-INTG PFLU_RS27540 bifunctional diguanylate cyclase/phosphodiesterase insig. 47 42
  Kangiella aquimarina DSM 16071 B158DRAFT_0304 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 46 39
  Alteromonas macleodii MIT1002 MIT1002_01199 Bacteriophytochrome cph2 insig. 45 43
  Pseudomonas stutzeri RCH2 Psest_1569 PAS domain S-box/diguanylate cyclase (GGDEF) domain strong 45 40
  Pseudomonas simiae WCS417 PS417_25885 diguanylate cyclase insig. 47 42
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01520 diguanylate cyclase (GGDEF) domain-containing protein insig. 42 53
  Azospirillum brasilense Sp245 AZOBR_RS17635 hypothetical protein insig. 43 46
  Azospirillum sp. SherDot2 MPMX19_06128 hypothetical protein insig. 43 47
  Rhodospirillum rubrum S1H Rru_A3137 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) insig. 46 41
  Herbaspirillum seropedicae SmR1 HSERO_RS04295 diguanylate cyclase strong 44 43
  Marinobacter adhaerens HP15 HP15_947 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor insig. 47 40
  Dechlorosoma suillum PS Dsui_1564 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 50 37
  Shewanella sp. ANA-3 Shewana3_0429 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 41 41
  Shewanella oneidensis MR-1 SO0427 sensory box protein (NCBI ptt file) sig. 41 41
  Rhodopseudomonas palustris CGA009 TX73_015915 GGDEF domain-containing protein insig. 52 38
  Paraburkholderia sabiae LMG 24235 QEN71_RS09820 diguanylate cyclase insig. 36 66
  Pseudomonas syringae pv. syringae B728a Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 44 44
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 44 44
  Kangiella aquimarina DSM 16071 B158DRAFT_1581 diguanylate cyclase (GGDEF) domain insig. 36 54
  Dechlorosoma suillum PS Dsui_0262 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 50 37
  Magnetospirillum magneticum AMB-1 AMB_RS06165 CBS domain-containing protein insig. 45 41
  Pseudomonas sp. S08-1 OH686_06215 hypothetical protein insig. 42 41
  Dechlorosoma suillum PS Dsui_3449 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 41 47
  Shewanella loihica PV-4 Shew_2121 diguanylate cyclase (RefSeq) cofit 32 66
  Marinobacter adhaerens HP15 HP15_806 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 47 37
  Rahnella sp. WP5 EX31_RS12105 bifunctional diguanylate cyclase/phosphodiesterase insig. 42 46
  Cupriavidus basilensis FW507-4G11 RR42_RS22465 membrane protein insig. 46 40
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS12250 diguanylate cyclase insig. 45 43
  Ralstonia solanacearum UW163 UW163_RS01355 diguanylate cyclase insig. 45 43
  Acidovorax sp. GW101-3H11 Ac3H11_2327 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 44 43
  Pseudomonas sp. S08-1 OH686_07355 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 44 40
  Pseudomonas putida KT2440 PP_3319 Sensory box protein/GGDEF domain protein insig. 42 45
  Rhodanobacter sp. FW510-T8 OKGIIK_01360 Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain insig. 49 40
  Pseudomonas sp. S08-1 OH686_00995 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 46 38
  Rhodanobacter denitrificans MT42 LRK55_RS05220 EAL domain-containing protein insig. 49 40
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS05445 EAL domain-containing protein insig. 49 40
  Dechlorosoma suillum PS Dsui_2160 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 45 40
  Magnetospirillum magneticum AMB-1 AMB_RS15005 two-component system response regulator insig. 45 39
  Rhodospirillum rubrum S1H Rru_A0558 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) (NCBI) insig. 46 37
  Dechlorosoma suillum PS Dsui_2032 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 45 38
  Magnetospirillum magneticum AMB-1 AMB_RS11515 DUF3365 domain-containing protein insig. 45 40
  Shewanella amazonensis SB2B Sama_3265 GGDEF domain-containing protein (RefSeq) insig. 44 39
  Herbaspirillum seropedicae SmR1 HSERO_RS16570 membrane protein insig. 44 43
  Pseudomonas fluorescens FW300-N2C3 AO356_24220 diguanylate cyclase insig. 43 43
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS07185 EAL domain-containing protein cofit 42 41
  Ralstonia solanacearum PSI07 RPSI07_RS21070 PAS domain S-box protein insig. 48 38
  Castellaniella sp019104865 MT123 ABCV34_RS00960 EAL domain-containing protein insig. 47 37
  Pseudomonas fluorescens FW300-N2E3 AO353_17440 diguanylate cyclase insig. 46 38
  Dechlorosoma suillum PS Dsui_1429 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 44 40
  Dechlorosoma suillum PS Dsui_3161 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein sig. 42 44
  Paraburkholderia graminis OAS925 ABIE53_005237 diguanylate cyclase (GGDEF)-like protein sig. 28 90
  Cupriavidus basilensis FW507-4G11 RR42_RS37310 diguanylate cyclase insig. 48 40