Homologs of GFF4531 from Variovorax sp. SCN45

Pseudouridine synthase
SEED: tRNA pseudouridine synthase A (EC 4.2.1.70)
KEGG: ribosomal large subunit pseudouridine synthase F

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF4531 Pseudouridine synthase insig. 100 100
o Variovorax sp. OAS795 ABID97_RS06090 RNA pseudouridine synthase cofit 85 95
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS18320 rRNA pseudouridine synthase insig. 47 95
o Acidovorax sp. GW101-3H11 Ac3H11_1984 tRNA pseudouridine synthase A (EC 4.2.1.70) insig. 46 96
o Pseudomonas putida KT2440 PP_1191 S4 domain protein insig. 44 95
o Pseudomonas segetis P6 ACVTMO_RS16405 rRNA pseudouridine synthase insig. 43 95
  Lysobacter sp. OAE881 ABIE51_RS13020 rRNA pseudouridine synthase insig. 45 95
o Pseudomonas sp. BP01 JOY50_RS01950 rRNA pseudouridine synthase insig. 43 95
o Pseudomonas aeruginosa PA14 IKLFDK_05110 RNA-binding protein strong 44 95
o Pseudomonas aeruginosa MRSN321 DY961_RS06900 rRNA pseudouridine synthase sig. 43 95
o Pseudomonas aeruginosa PUPa3 DQ20_RS45935 rRNA pseudouridine synthase insig. 43 95
  Rhodanobacter denitrificans MT42 LRK55_RS15640 rRNA pseudouridine synthase insig. 44 95
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS15885 rRNA pseudouridine synthase insig. 44 95
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4655 tRNA pseudouridine synthase A (EC 4.2.1.70) insig. 42 95
o Pseudomonas orientalis W4I3 QF045_RS08785 rRNA pseudouridine synthase no data 41 95
o Pseudomonas sp. S08-1 OH686_05400 Pseudouridine synthase insig. 41 95
o Pseudomonas sp. RS175 PFR28_00484 Dual-specificity RNA pseudouridine synthase RluF insig. 42 95
o Pseudomonas fluorescens FW300-N2C3 AO356_05610 RNA-binding protein insig. 42 95
o Pseudomonas sp. SVBP6 COO64_RS19990 rRNA pseudouridine synthase insig. 41 95
  Rhodanobacter sp. FW510-T8 OKGIIK_04535 rsuA RNA-binding protein insig. 43 95
o Pseudomonas fluorescens FW300-N2E3 AO353_16865 RNA-binding protein insig. 41 95
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3158 tRNA pseudouridine synthase A (EC 4.2.1.70) insig. 41 95
o Pseudomonas fluorescens SBW25 PFLU_RS05940 RNA-binding protein S4 insig. 40 95
o Pseudomonas fluorescens SBW25-INTG PFLU_RS05940 RNA-binding protein S4 insig. 40 95
o Pseudomonas simiae WCS417 PS417_05870 RNA-binding protein S4 insig. 40 95
o Pseudomonas lactucae CFBP13502 GEMAOFIL_01345 Dual-specificity RNA pseudouridine synthase RluF cofit 40 95
o Pseudomonas syringae pv. syringae B728a Psyr_1390 RNA-binding S4 insig. 36 95
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1390 RNA-binding S4 insig. 36 95
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1469.1 tRNA pseudouridine synthase A (EC 4.2.1.70) insig. 41 95
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF631 tRNA pseudouridine synthase A (EC 4.2.1.70) insig. 39 94
o Pseudomonas stutzeri RCH2 Psest_2917 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases insig. 39 95
o Pseudomonas sp. DMC3 GFF2124 Ribosomal small subunit pseudouridine synthase A cofit 40 95
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2980 tRNA pseudouridine synthase A (EC 4.2.1.70) insig. 40 87
  Methylophilus sp. DMC18 GFF2067 hypothetical protein insig. 37 94
  Burkholderia phytofirmans PsJN BPHYT_RS12155 RNA-binding protein S4 insig. 33 95
  Variovorax sp. SCN45 GFF3530 Pseudouridine synthase insig. 34 95
  Castellaniella sp019104865 MT123 ABCV34_RS03070 pseudouridine synthase insig. 34 95
  Dechlorosoma suillum PS Dsui_2759 pseudouridine synthase family protein insig. 35 94
  Variovorax sp. OAS795 ABID97_RS00980 pseudouridine synthase strong 33 95
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00606 23S rRNA pseudouridine2604 synthase insig. 35 90
  Cupriavidus basilensis FW507-4G11 RR42_RS11890 16S rRNA pseudouridylate synthase insig. 33 95
  Herbaspirillum seropedicae SmR1 HSERO_RS10860 RNA pseudouridylate synthase insig. 35 95
  Paraburkholderia graminis OAS925 ABIE53_002509 23S rRNA pseudouridine2604 synthase insig. 33 95
  Ralstonia solanacearum PSI07 RPSI07_RS17115 16S rRNA uridine-516 pseudouridylate synthase cofit 35 95
  Ralstonia sp. UNC404CL21Col ABZR87_RS11810 pseudouridine synthase insig. 33 95
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF343 tRNA pseudouridine synthase A (EC 4.2.1.70) cofit 34 95
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS00360 16S rRNA pseudouridylate synthase sig. 34 95
  Ralstonia solanacearum UW163 UW163_RS13690 16S rRNA pseudouridylate synthase insig. 34 95
  Ralstonia solanacearum GMI1000 RS_RS07030 16S rRNA uridine-516 pseudouridylate synthase sig. 34 95
  Acidovorax sp. GW101-3H11 Ac3H11_4641 tRNA pseudouridine synthase A (EC 4.2.1.70) sig. 32 94
  Paraburkholderia sabiae LMG 24235 QEN71_RS06405 pseudouridine synthase cofit 32 98
  Vibrio cholerae E7946 ATCC 55056 CSW01_11335 23S rRNA pseudouridine(2604) synthase RluF insig. 27 93
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS07850 pseudouridine synthase insig. 28 96
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_08930 hypothetical protein insig. 28 93
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1843.1 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) insig. 28 93
  Marinobacter adhaerens HP15 HP15_886 pseudouridine synthase family 1 protein insig. 28 95
  Caulobacter crescentus NA1000 CCNA_00898 ribosomal large subunit pseudouridine synthase F cofit 28 96
  Caulobacter crescentus NA1000 Δfur CCNA_00898 ribosomal large subunit pseudouridine synthase F cofit 28 96
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_08925 23S rRNA pseudouridine synthase F insig. 25 95
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1010 pseudouridine synthase insig. 24 95
  Desulfovibrio vulgaris Miyazaki F DvMF_0369 pseudouridine synthase (RefSeq) sig. 28 94
  Magnetospirillum magneticum AMB-1 AMB_RS20865 rRNA pseudouridine synthase cofit 28 91
  Lysobacter sp. OAE881 ABIE51_RS12720 pseudouridine synthase insig. 27 94
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS12605 16S rRNA pseudouridine(516) synthase insig. 27 87
  Ralstonia solanacearum UW163 UW163_RS00960 16S rRNA pseudouridine(516) synthase insig. 27 87
  Fusobacterium nucleatum SB010 HUW76_04625 rRNA pseudouridine synthase cofit 21 94
  Ralstonia solanacearum PSI07 RPSI07_RS20655 16S rRNA pseudouridine(516) synthase insig. 27 87
  Alteromonas macleodii MIT1002 MIT1002_01776 Ribosomal large subunit pseudouridine synthase F insig. 26 93
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS16400 pseudouridine synthase cofit 25 94
  Serratia liquefaciens MT49 IAI46_21130 23S rRNA pseudouridine(2604) synthase RluF insig. 25 93
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS01375 pseudouridine synthase insig. 26 94
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS07735 23S rRNA pseudouridine(2604) synthase RluF cofit 25 93
  Pantoea sp. MT58 IAI47_19435 23S rRNA pseudouridine(2604) synthase RluF insig. 25 93
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0719 pseudouridine synthase no data 24 94
  Rahnella sp. WP5 EX31_RS19195 16S rRNA pseudouridine(516) synthase RsuA insig. 25 94
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS19110 23S rRNA pseudouridine synthase F insig. 23 96
  Erwinia amylovora T8 OLJFJH_05535 23S rRNA pseudouridine(2604) synthase RluF sig. 25 94
  Rahnella sp. WP5 EX31_RS06075 23S rRNA pseudouridine(2604) synthase RluF insig. 25 94
  Escherichia coli BL21 ECD_03894 23S rRNA pseudouridine(2604) synthase insig. 25 94
  Escherichia coli BW25113 b4022 yjbC 23S rRNA pseudouridine synthase (NCBI) sig. 25 94
  Klebsiella pneumoniae MKP103 KDGMDA_10215 23S rRNA pseudouridine(2604) synthase RluF insig. 24 93
  Synechococcus elongatus PCC 7942 Synpcc7942_1010 ribosomal large subunit pseudouridine synthase B strong 26 94
  Enterobacter asburiae PDN3 EX28DRAFT_4322 pseudouridine synthase insig. 25 95
  Escherichia fergusonii Becca EFB2_04580 Dual-specificity RNA pseudouridine synthase RluF insig. 24 94
  Escherichia coli Nissle 1917 ECOLIN_RS23225 23S rRNA pseudouridine(2604) synthase RluF insig. 24 94
  Escherichia coli ECOR27 NOLOHH_05365 rluF 23S rRNA pseudouridine(2604) synthase RluF insig. 24 94
  Escherichia coli ECOR38 HEPCGN_11820 rluF 23S rRNA pseudouridine(2604) synthase RluF insig. 24 94
  Escherichia coli ECRC100 OKFHMN_13190 rluF 23S rRNA pseudouridine(2604) synthase RluF cofit 24 94
  Escherichia coli ECRC101 MCAODC_03690 rluF 23S rRNA pseudouridine(2604) synthase RluF insig. 24 94
  Escherichia coli ECRC102 NIAGMN_10940 rluF 23S rRNA pseudouridine(2604) synthase RluF insig. 24 94
  Escherichia coli ECRC62 BNILDI_06155 rluF 23S rRNA pseudouridine(2604) synthase RluF insig. 24 94
  Escherichia coli ECRC98 JDDGAC_16815 rluF 23S rRNA pseudouridine(2604) synthase RluF insig. 24 94
  Escherichia coli ECRC99 KEDOAH_14970 rluF 23S rRNA pseudouridine(2604) synthase RluF no data 24 94
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04027 23S rRNA pseudouridine(2604) synthase insig. 24 94
  Enterobacter sp. TBS_079 MPMX20_00237 Dual-specificity RNA pseudouridine synthase RluF insig. 24 95
  Rhodanobacter sp. FW510-T8 OKGIIK_16610 Pseudouridine synthase insig. 25 94
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1362 Ribosomal large subunit pseudouridine synthase F (EC 4.2.1.70) insig. 24 93
  Rhodospirillum rubrum S1H Rru_A0652 Pseudouridine synthase, Rsu (NCBI) cofit 28 92
  Rhodanobacter sp. FW510-T8 OKGIIK_06590 Pseudouridine synthase insig. 26 93
  Variovorax sp. OAS795 ABID97_RS09900 16S rRNA pseudouridine(516) synthase insig. 25 87