Homologs of GFF4076 from Sphingobium sp. HT1-2

Two-component transcriptional response regulator, LuxR family
SEED: DNA-binding response regulator
KEGG: two-component system, OmpR family, response regulator

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF4076 Two-component transcriptional response regulator, LuxR family strong 100 100
o Sphingomonas koreensis DSMZ 15582 Ga0059261_1369 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain strong 90 99
o Rhodopseudomonas palustris CGA009 TX73_009870 response regulator transcription factor insig. 68 100
o Agrobacterium fabrum C58 Atu0970 two component response regulator no data 66 100
o Sinorhizobium meliloti 1021 SMc00458 transcriptional regulator strong 65 100
o Azospirillum sp. SherDot2 MPMX19_04078 Virulence transcriptional regulatory protein PhoP insig. 68 99
o Rhizobium sp. OAE497 ABIE40_RS05660 response regulator transcription factor cofit 65 100
o Bosea sp. OAE506 ABIE41_RS21475 response regulator transcription factor insig. 67 99
o Azospirillum brasilense Sp245 AZOBR_RS18790 transcriptional regulator insig. 67 99
o Xanthobacter sp. DMC5 GFF3491 Transcriptional regulatory protein PhoP insig. 68 99
o Magnetospirillum magneticum AMB-1 AMB_RS00960 DNA-binding response regulator strong 59 98
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS15665 response regulator transcription factor cofit 63 98
o Rhodospirillum rubrum S1H Rru_A3187 Two component Transcriptional regulator, Winged helix family (NCBI) insig. 61 98
o Castellaniella sp019104865 MT123 ABCV34_RS15610 response regulator transcription factor insig. 61 98
o Caulobacter crescentus NA1000 CCNA_02854 two-component response regulator sig. 63 98
o Caulobacter crescentus NA1000 Δfur CCNA_02854 two-component response regulator cofit 63 98
o Vibrio cholerae E7946 ATCC 55056 CSW01_08235 DNA-binding response regulator cofit 58 98
  Agrobacterium fabrum C58 Atu5505 two component response regulator insig. 54 98
  Rhodopseudomonas palustris CGA009 TX73_025035 response regulator transcription factor insig. 56 97
o Shewanella amazonensis SB2B Sama_3303 response regulator receiver protein (RefSeq) insig. 55 98
o Shewanella oneidensis MR-1 SO4647 DNA-binding response regulator (NCBI ptt file) insig. 54 98
o Shewanella loihica PV-4 Shew_2695 two component transcriptional regulator (RefSeq) insig. 53 98
o Shewanella sp. ANA-3 Shewana3_4025 two component transcriptional regulator (RefSeq) insig. 53 98
  Rhizobium sp. OAE497 ABIE40_RS30390 response regulator transcription factor insig. 53 98
  Caulobacter crescentus NA1000 CCNA_01362 two-component response regulator sig. 53 98
  Caulobacter crescentus NA1000 Δfur CCNA_01362 two-component response regulator cofit 53 98
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS17390 response regulator transcription factor no data 51 99
o Alteromonas macleodii MIT1002 MIT1002_01421 Transcriptional regulatory protein PhoP insig. 52 98
o Lysobacter sp. OAE881 ABIE51_RS03940 response regulator transcription factor strong 52 97
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.5008.1 Two-component system regulatory protein no data 51 99
o Rhodanobacter denitrificans MT42 LRK55_RS05740 response regulator transcription factor no data 50 99
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS05985 response regulator transcription factor cofit 50 99
o Marinobacter adhaerens HP15 HP15_2937 two component transcriptional regulator, winged helix family insig. 53 98
o Rhodanobacter sp. FW510-T8 OKGIIK_00635 ompR DNA-binding response regulator no data 50 99
  Agrobacterium fabrum C58 Atu4712 two component response regulator insig. 51 99
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS18360 response regulator transcription factor strong 50 99
o Kangiella aquimarina DSM 16071 B158DRAFT_1560 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain cofit 52 98
o Pseudomonas segetis P6 ACVTMO_RS12800 response regulator transcription factor insig. 51 97
  Shewanella sp. ANA-3 Shewana3_0241 two component transcriptional regulator (RefSeq) cofit 52 98
  Shewanella oneidensis MR-1 SO4487 DNA-binding response regulator (NCBI ptt file) insig. 52 98
o Methylophilus sp. DMC18 GFF417 Transcriptional regulatory protein QseB insig. 50 98
o Pseudomonas aeruginosa MRSN321 DY961_RS03930 carR;inference=COORDINATES two-component system response regulator CarR insig. 52 97
o Pseudomonas aeruginosa PA14 IKLFDK_13340 two-component system response regulator CarR sig. 52 97
o Pseudomonas aeruginosa PUPa3 DQ20_RS34965 carR;inference=COORDINATES two-component system response regulator CarR insig. 52 97
o Pseudomonas stutzeri RCH2 Psest_3533 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain insig. 49 97
o Pseudomonas orientalis W4I3 QF045_RS12350 response regulator transcription factor insig. 49 97
o Pseudomonas sp. DMC3 GFF1365 Transcriptional regulatory protein QseB cofit 49 97
o Pseudomonas sp. SVBP6 COO64_RS17260 response regulator transcription factor insig. 49 97
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2451 Two-component system response regulator QseB insig. 49 97
o Pseudomonas fluorescens FW300-N2E3 AO353_19775 transcriptional regulator insig. 49 97
  Paraburkholderia graminis OAS925 ABIE53_003418 two-component system response regulator QseB strong 50 98
o Pseudomonas sp. S08-1 OH686_00055 Two-component system response regulator QseB insig. 50 97
o Pseudomonas sp. BP01 JOY50_RS10885 response regulator transcription factor insig. 49 97
o Pseudomonas fluorescens SBW25 PFLU_RS10435 response regulator transcription factor insig. 48 97
o Pseudomonas fluorescens SBW25-INTG PFLU_RS10435 response regulator transcription factor strong 48 97
o Pseudomonas putida KT2440 PP_2347 DNA-binding response regulator insig. 49 97
o Pseudomonas lactucae CFBP13502 GEMAOFIL_02165 Transcriptional regulatory protein QseB cofit 48 97
o Pseudomonas sp. RS175 PFR28_02847 Transcriptional regulatory protein QseB insig. 49 97
o Pseudomonas simiae WCS417 PS417_10270 transcriptional regulator insig. 48 97
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2011 Transcriptional regulatory protein PhoP strong 47 99
  Burkholderia phytofirmans PsJN BPHYT_RS16220 transcriptional regulator no data 50 98
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04180 two component transcriptional regulator, winged helix family sig. 50 98
o Pseudomonas syringae pv. syringae B728a Psyr_3212 Response regulator receiver:Transcriptional regulatory protein, C-terminal sig. 49 97
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3212 Response regulator receiver:Transcriptional regulatory protein, C-terminal insig. 49 97
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_105 Two-component system response regulator QseB no data 49 97
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_41 Two-component system response regulator QseB sig. 48 97
o Pseudomonas fluorescens FW300-N2C3 AO356_21280 transcriptional regulator insig. 48 97
  Pseudomonas sp. SVBP6 COO64_RS07420 response regulator insig. 47 100
  Pseudomonas fluorescens FW300-N2E3 AO353_02815 transcriptional regulator strong 47 100
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5704 Transcriptional regulatory protein PhoP strong 46 99
  Pseudomonas fluorescens FW300-N2C3 AO356_18965 transcriptional regulator strong 46 99
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3483 Transcriptional regulatory protein PhoP strong 46 99
  Pseudomonas syringae pv. syringae B728a Psyr_3709 Response regulator receiver:Transcriptional regulatory protein, C-terminal insig. 47 99
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3709 Response regulator receiver:Transcriptional regulatory protein, C-terminal insig. 47 99
  Pseudomonas sp. BP01 JOY50_RS01975 response regulator insig. 46 100
  Pseudomonas simiae WCS417 PS417_13595 XRE family transcriptional regulator insig. 48 99
  Pseudomonas sp. RS175 PFR28_03244 Transcriptional regulatory protein PhoP strong 47 99
  Pseudomonas sp. RS175 PFR28_02328 Transcriptional regulatory protein QseB sig. 47 99
  Pseudomonas sp. DMC3 GFF4840 Virulence transcriptional regulatory protein PhoP cofit 46 99
  Pseudomonas aeruginosa MRSN321 DY961_RS06525 phoP;inference=COORDINATES two-component system response regulator PhoP sig. 47 100
  Pseudomonas aeruginosa PA14 IKLFDK_05465 two-component system response regulator PhoP sig. 47 100
  Pseudomonas aeruginosa PUPa3 DQ20_RS46275 phoP;inference=COORDINATES two-component system response regulator PhoP insig. 47 100
  Pseudomonas putida KT2440 PP_1186 two component system DNA-binding transcriptional dual regulator strong 46 100
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04447 Virulence transcriptional regulatory protein PhoP cofit 44 100
  Pseudomonas sp. S08-1 OH686_04665 Two-component system response regulator QseB insig. 48 99
  Pseudomonas simiae WCS417 PS417_21515 transcriptional regulator strong 44 100
  Pseudomonas orientalis W4I3 QF045_RS23605 response regulator cofit 44 100
  Pseudomonas fluorescens SBW25 PFLU_RS15245 response regulator insig. 47 99
  Pseudomonas fluorescens SBW25-INTG PFLU_RS15245 response regulator insig. 47 99
  Pseudomonas sp. DMC3 GFF3603 Transcriptional regulatory protein QseB cofit 47 99
  Pseudomonas sp. SVBP6 COO64_RS20755 response regulator insig. 47 99
o Enterobacter asburiae PDN3 EX28DRAFT_3057 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain insig. 49 98
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4454 Two-component system response regulator QseB no data 46 99
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1539 Two-component system response regulator QseB insig. 46 99
  Paraburkholderia sabiae LMG 24235 QEN71_RS02475 response regulator cofit 50 98
  Pseudomonas fluorescens FW300-N2C3 AO356_23845 XRE family transcriptional regulator insig. 46 99
o Erwinia amylovora T8 OLJFJH_07175 two-component system response regulator PmrA insig. 49 99
o Herbaspirillum seropedicae SmR1 HSERO_RS21985 transcriptional regulator insig. 47 97
o Cupriavidus basilensis FW507-4G11 RR42_RS30345 XRE family transcriptional regulator insig. 47 100
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3169 Two-component system response regulator QseB insig. 46 99